KEGG   Tachysurus fulvidraco (yellow catfish): 113662646
Entry
113662646         CDS       T08119                                 
Name
(RefSeq) breast cancer type 1 susceptibility protein homolog isoform X1
  KO
K10605  breast cancer type 1 susceptibility protein [EC:2.3.2.27]
Organism
tfd  Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03440  Homologous recombination
tfd03460  Fanconi anemia pathway
tfd04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:tfd00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    113662646
  09124 Replication and repair
   03440 Homologous recombination
    113662646
   03460 Fanconi anemia pathway
    113662646
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:tfd01009]
    113662646
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tfd04121]
    113662646
   03036 Chromosome and associated proteins [BR:tfd03036]
    113662646
   03400 DNA repair and recombination proteins [BR:tfd03400]
    113662646
Enzymes [BR:tfd01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     113662646
Protein phosphatases and associated proteins [BR:tfd01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     113662646
Ubiquitin system [BR:tfd04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    113662646
  Multi subunit Ring-finger type E3
   BRCC complex
    113662646
Chromosome and associated proteins [BR:tfd03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     113662646
DNA repair and recombination proteins [BR:tfd03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    BRCA1-core complex
     113662646
    BRCA1-A complex
     113662646
    BRCA1-B complex
     113662646
    BRCA1-C complex
     113662646
    BRCA complex
     113662646
   FA (Fanconi anemia) pathway
    Downstream FA components
     113662646
SSDB
Motif
Pfam: BRCT BRCT_2 zf-C3HC4 zf-C3HC4_4 zf-C3HC4_2 zf-C3HC4_3 zf-RING_UBOX zf-RING_2 zf-RING_5 zf-Nse RTT107_BRCT_5 zf-RING_6 zf-RING_10 TRAF3_RING Sina_RING zf-RING_4 zf-ANAPC11 zf-MIZ Zn_Ribbon_TF Baculo_IE-1 zf-rbx1
Other DBs
NCBI-GeneID: 113662646
NCBI-ProteinID: XP_027033462
LinkDB
Position
8:complement(12415220..12428657)
AA seq 1441 aa
MSVVKAEDVKRGIAVIWENLQCPICLDLMSEPVSTQCDHQFCKFCMTKLLERNKRKETSC
PVCKTKVTKRSLQESPGFQKLVEGLRNLVCSYEIDTRTNYFTGLPQRRHGASVETESRDQ
QGSGENTTSEGNVTEKEATISSTAAAKDAFAKLMSLEDSCPATLVKDRSDSSLADLPQKS
ETNLAVPEDVLPRTEASDSPTQQDVAPYEVKHSCRRSKRLCLDPDRIMDKREKKSVQKVS
EWLLKISPVSDAQAEGSAEGDFPKFTDSDAEKESTASGVSTEINDSAHGKADMSPVREVP
CRGLEEQVFGAVYKRERKVIKNKVAKSFSPAQAIAPVVCYGNLSEKAEKVEIPQRRSSRR
LNSADFIRKTSNKDTEDGLAQEEVDEGNKQENGNTPLRSSGKQERVQSGPDKNAKNELTA
DSPAFAVPLKKRGRRSKMQEVWQDVDCELTENENNTDNKKDRKRRSTRSTHDTTKDHNLE
KCKNAKYAKSLALVSAGAEIVELSKVPSNLNLIETEVNIESYPSSAEMKSPDARKTRRSL
RLQEFTAEVQGLPRRRRSKQAHPKPADGPENNPSANLDEQSAKTAYLGTSHINDSQSKKP
EWSMMRNGCVYNDNFENIEIMQSSEDVAALSIAEENSHFSVVPDSVDRDKHILPCSTKAA
NLTSPLAALVPESLPQKYQKSPSTKTLSLAVEHKVTEQDDDTNDSELDTEQLMKTFKATK
RKSFYLGSPRTSHSRTQEKSLTQILEEDKQENVDLTEIRGISLNIDQVLPPNPSEVSAHE
IMSQNSQSGIADVASVSLLQVKSPTLPKDTQKHNSIRTSAASDKPEMVANSQDYSRSQDS
RPSVKVDRANSVQLFSTSPTEKETQISHNKDSTKSPNSSEIQGCKVSSIPLGPLTSSETQ
CNNFESSVTPDGLVPNAPEAQLTEPETTQNLDKLDEGEFNSQPCLRKKRKPQRLESSDSE
SSVEDDDLPPLAQIFKDPVKNSLNQNGLQVEDQNTMAGLVPASQDSHSHSEPEGRSNSSS
QCVAPYQKQKSLQDVNSNDVRDGGISEPACMDEWITSSQGSVDLFGTPRESEDAAGGAED
VAGGAKDVAGGPEDIARGAEDVAGGAEDVACGKTGHSIESSQCMSEIITTQQRDEMQQEL
HRLERMMALVTEALQKKGGDVDDTNKMEDVNQHPGISTGPRRSQRSCKRGRQMSQRSEVK
GQRAAAEDPTIDAMDEKKLNELKGETLGCKTDSGARTQLVASGLSAAEQALLKKFARKMK
AGISSHVTPTTTHIIIKTDRDLVCERTLKYFQGIAGRKWVVSFLWISECFNHGKLLAENP
YEVCGDVVNGRDHKGPQKARTAPDNNLLMKGCEICFQGSFTDMTTDQMEVMVELCGATVV
KDPLMFSRKNICHQLVVVQPDPDDSQSYYAALQRKATVVTRSWLLDSVATYTLQNPRDYK
P
NT seq 4326 nt   +upstreamnt  +downstreamnt
atgagtgtggtgaaggcagaagacgtgaagagagggatcgctgtgatttgggagaacctg
cagtgtccgatatgtttggatttgatgagtgaacccgtttcgacccagtgtgaccaccag
ttctgcaagttctgcatgaccaaactgctggagcggaataagaggaaggaaaccagctgc
cccgtgtgtaagacgaaggtcaccaagaggagtctgcaggaaagtccaggtttccagaaa
ctggtagaaggcctccgaaatttagtctgttcatacgaaattgatacgcgaacaaactat
ttcactggcttgccacagaggagacatggcgctagtgttgagacagagtccagagatcag
cagggcagtggagagaatacgacctccgagggcaatgtgactgagaaagaagcgactatt
tcctctacagcagcagctaaagatgcttttgcaaaactcatgagtcttgaggattcatgt
cctgccactttagtaaaagatcgctcagacagcagtcttgctgatttgccacaaaagtct
gaaacaaaccttgccgttcctgaagacgttctaccgagaacagaagccagcgattcacca
acacagcaggatgttgctccatatgaagtaaaacattcctgcagacgatctaaaaggctt
tgcttggatccagacagaattatggataagcgagagaagaaaagtgtgcagaaagtgtct
gagtggttgctgaagatttctccggtttctgacgcccaagctgaaggcagtgctgaagga
gattttccgaagttcacagacagcgatgctgaaaaggagagtacagcttcaggtgtgtca
acggagatcaatgattctgctcacggtaaagctgacatgagtcctgtaagggaagtgcca
tgtagaggtctggaagaacaagtgtttggggcggtgtataaacgagagcgcaaagttatc
aagaataaagttgccaaaagtttctctcctgcacaagcgattgctcctgttgtttgttat
ggaaatctgtcggaaaaggctgaaaaggtcgagataccccagaggaggtcaagccgtagg
ttgaattcagctgacttcattaggaagacatcaaataaagatacagaagatggattagct
caagaggaagttgatgaaggaaacaaacaagaaaacggcaacacgccgttaaggtcctca
ggcaagcaggaaagggtgcagagtggtcctgataaaaatgctaaaaatgaacttactgca
gatagtccagcatttgcagtacctctgaagaaaagagggcggagatcaaagatgcaggag
gtttggcaagatgtggactgtgaattgactgaaaacgaaaacaacaccgacaacaagaaa
gatcggaagagacggagcactcgtagcactcatgacactactaaagatcacaatttggag
aaatgcaaaaatgccaaatatgccaagtcccttgctctagtaagtgctggagctgaaatt
gttgagctgagtaaggtcccaagtaatcttaatttaatcgagacagaagttaatattgaa
agttatcctagtagtgcagagatgaagtctcctgatgctcggaaaaccagacgaagccta
aggctgcaggagttcactgcggaggttcaaggtcttccgagaagaagacgatctaaacaa
gctcacccaaaacctgctgacggacctgaaaataatccatctgctaatttggatgagcaa
agtgccaagactgcttatcttggtacaagtcatattaatgattctcagagcaaaaaacca
gaatggtccatgatgagaaatggttgtgtttacaatgataactttgaaaacattgaaatc
atgcagtccagtgaggatgtggctgctctgtctatagctgaagaaaattcgcacttttct
gttgtcccagactctgtggatcgagataaacacattctcccttgttctaccaaagctgca
aacttgacaagtcccttagcagctctggttccagaatctttaccacagaaatatcagaaa
tcaccatctacaaaaacactgtcccttgctgttgagcacaaagttactgagcaagatgac
gataccaatgatagtgaacttgacacagagcaactcatgaagaccttcaaagcgaccaag
agaaaatccttctacctgggtagtcccagaacttcacactccagaacccaagagaaatcc
ctgactcagattttagaggaagacaagcaagagaatgtagatttaacagagatacgaggg
atctctctgaacattgatcaagtactgcccccaaatccatctgaggtatcagctcatgag
ataatgtctcaaaactctcaaagtggtattgcagatgttgcaagtgtcagtcttcttcag
gtaaaatcacccactcttccaaaggacacccagaaacacaattcgatcagaacctcagct
gccagtgacaaacctgagatggttgcaaattctcaagattactcaagatctcaagattcc
aggccttctgtcaaggttgaccgtgcaaattctgtccaacttttctctacaagcccgacc
gaaaaggaaacacaaatctctcataacaaggactcaacaaagtctccaaattcttcagaa
attcaaggttgcaaagtctccagcattccattgggacccttgacaagctctgaaactcag
tgtaataattttgagtcctcagtcaccccagatggccttgtaccaaatgctcctgaggct
cagctaacagaacctgaaaccactcagaacttggataagctggatgaaggagaatttaat
tctcagccatgtttgcggaagaagaggaagccccagagactggagtcttcagattctgaa
tccagtgttgaggatgatgacctgcctccactcgcccaaatatttaaagatccagtgaaa
aactctttaaaccaaaatgggcttcaagttgaagaccaaaacacaatggcaggtttagtc
ccagcaagtcaggatagtcactctcacagcgaaccagaaggtcggtcaaattcttcaagc
cagtgcgttgccccttaccagaaacagaaatctcttcaagatgtaaattctaatgatgta
cgagatggtggtatttctgaacctgcttgcatggatgagtggattacttctagtcaggga
tctgtggatctgtttgggacaccacgagaatctgaagacgcagctgggggtgccgaagac
gtagctgggggtgccaaagacgtagctgggggtcccgaagacatagctaggggtgccgag
gacgtagctgggggtgccgaagacgtagcttgtggcaaaacagggcattccatcgagtca
tctcaatgcatgagtgagattattaccactcagcagagagacgagatgcagcaggagttg
cacaggttggagagaatgatggctttagtgactgaagctctccagaagaaaggtggagac
gtggacgatacaaataagatggaggatgtcaatcagcacccgggtataagcacagggccg
cggagaagtcagcgatcctgtaaacgtggaaggcagatgtctcagagatcagaggtcaaa
ggtcagcgtgctgcagctgaggatccgaccatcgatgcgatggacgagaagaagctgaac
gagctgaagggagaaaccctgggatgtaaaacagatagcggagccagaacgcagctggtg
gcgtcggggcttagtgctgctgaacaggccctgttgaagaaatttgcaaggaagatgaag
gctggtataagcagtcatgtcactcccactacaactcacatcatcatcaagacagataga
gacttggtgtgtgagcgaacgctgaagtacttccagggaatcgctggcaggaagtgggtg
gtgagcttcctgtggatctccgagtgcttcaatcatggcaaacttttggctgaaaatccg
tacgaggtttgcggtgacgttgttaatggacgcgaccacaaaggaccccaaaaagcccga
accgctccggataataacctgctgatgaaaggatgtgagatctgcttccagggttccttc
acagatatgaccacagatcagatggaggtcatggtggagttgtgtggtgctacagtggtg
aaagatccactgatgttctccagaaagaatatctgtcatcagctggtggtggttcagccc
gaccctgatgactctcagtcgtattacgcagctctacagagaaaagccactgtagtgact
cggagttggttgttagattctgttgccacgtacacgctccaaaatccacgtgattataaa
ccgtga

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