Tachysurus fulvidraco (yellow catfish): 113662646
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Entry
113662646 CDS
T08119
Name
(RefSeq) breast cancer type 1 susceptibility protein homolog isoform X1
KO
K10605
breast cancer type 1 susceptibility protein [EC:
2.3.2.27
]
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03440
Homologous recombination
tfd03460
Fanconi anemia pathway
tfd04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
113662646
09124 Replication and repair
03440 Homologous recombination
113662646
03460 Fanconi anemia pathway
113662646
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tfd01009
]
113662646
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tfd04121
]
113662646
03036 Chromosome and associated proteins [BR:
tfd03036
]
113662646
03400 DNA repair and recombination proteins [BR:
tfd03400
]
113662646
Enzymes [BR:
tfd01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113662646
Protein phosphatases and associated proteins [BR:
tfd01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
113662646
Ubiquitin system [BR:
tfd04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
113662646
Multi subunit Ring-finger type E3
BRCC complex
113662646
Chromosome and associated proteins [BR:
tfd03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
113662646
DNA repair and recombination proteins [BR:
tfd03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
113662646
BRCA1-A complex
113662646
BRCA1-B complex
113662646
BRCA1-C complex
113662646
BRCA complex
113662646
FA (Fanconi anemia) pathway
Downstream FA components
113662646
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
BRCT_2
zf-C3HC4
zf-C3HC4_4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_UBOX
zf-RING_2
zf-RING_5
zf-Nse
RTT107_BRCT_5
zf-RING_6
zf-RING_10
TRAF3_RING
Sina_RING
zf-RING_4
zf-ANAPC11
zf-MIZ
Zn_Ribbon_TF
Baculo_IE-1
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
113662646
NCBI-ProteinID:
XP_027033462
LinkDB
All DBs
Position
8:complement(12415220..12428657)
Genome browser
AA seq
1441 aa
AA seq
DB search
MSVVKAEDVKRGIAVIWENLQCPICLDLMSEPVSTQCDHQFCKFCMTKLLERNKRKETSC
PVCKTKVTKRSLQESPGFQKLVEGLRNLVCSYEIDTRTNYFTGLPQRRHGASVETESRDQ
QGSGENTTSEGNVTEKEATISSTAAAKDAFAKLMSLEDSCPATLVKDRSDSSLADLPQKS
ETNLAVPEDVLPRTEASDSPTQQDVAPYEVKHSCRRSKRLCLDPDRIMDKREKKSVQKVS
EWLLKISPVSDAQAEGSAEGDFPKFTDSDAEKESTASGVSTEINDSAHGKADMSPVREVP
CRGLEEQVFGAVYKRERKVIKNKVAKSFSPAQAIAPVVCYGNLSEKAEKVEIPQRRSSRR
LNSADFIRKTSNKDTEDGLAQEEVDEGNKQENGNTPLRSSGKQERVQSGPDKNAKNELTA
DSPAFAVPLKKRGRRSKMQEVWQDVDCELTENENNTDNKKDRKRRSTRSTHDTTKDHNLE
KCKNAKYAKSLALVSAGAEIVELSKVPSNLNLIETEVNIESYPSSAEMKSPDARKTRRSL
RLQEFTAEVQGLPRRRRSKQAHPKPADGPENNPSANLDEQSAKTAYLGTSHINDSQSKKP
EWSMMRNGCVYNDNFENIEIMQSSEDVAALSIAEENSHFSVVPDSVDRDKHILPCSTKAA
NLTSPLAALVPESLPQKYQKSPSTKTLSLAVEHKVTEQDDDTNDSELDTEQLMKTFKATK
RKSFYLGSPRTSHSRTQEKSLTQILEEDKQENVDLTEIRGISLNIDQVLPPNPSEVSAHE
IMSQNSQSGIADVASVSLLQVKSPTLPKDTQKHNSIRTSAASDKPEMVANSQDYSRSQDS
RPSVKVDRANSVQLFSTSPTEKETQISHNKDSTKSPNSSEIQGCKVSSIPLGPLTSSETQ
CNNFESSVTPDGLVPNAPEAQLTEPETTQNLDKLDEGEFNSQPCLRKKRKPQRLESSDSE
SSVEDDDLPPLAQIFKDPVKNSLNQNGLQVEDQNTMAGLVPASQDSHSHSEPEGRSNSSS
QCVAPYQKQKSLQDVNSNDVRDGGISEPACMDEWITSSQGSVDLFGTPRESEDAAGGAED
VAGGAKDVAGGPEDIARGAEDVAGGAEDVACGKTGHSIESSQCMSEIITTQQRDEMQQEL
HRLERMMALVTEALQKKGGDVDDTNKMEDVNQHPGISTGPRRSQRSCKRGRQMSQRSEVK
GQRAAAEDPTIDAMDEKKLNELKGETLGCKTDSGARTQLVASGLSAAEQALLKKFARKMK
AGISSHVTPTTTHIIIKTDRDLVCERTLKYFQGIAGRKWVVSFLWISECFNHGKLLAENP
YEVCGDVVNGRDHKGPQKARTAPDNNLLMKGCEICFQGSFTDMTTDQMEVMVELCGATVV
KDPLMFSRKNICHQLVVVQPDPDDSQSYYAALQRKATVVTRSWLLDSVATYTLQNPRDYK
P
NT seq
4326 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtggtgaaggcagaagacgtgaagagagggatcgctgtgatttgggagaacctg
cagtgtccgatatgtttggatttgatgagtgaacccgtttcgacccagtgtgaccaccag
ttctgcaagttctgcatgaccaaactgctggagcggaataagaggaaggaaaccagctgc
cccgtgtgtaagacgaaggtcaccaagaggagtctgcaggaaagtccaggtttccagaaa
ctggtagaaggcctccgaaatttagtctgttcatacgaaattgatacgcgaacaaactat
ttcactggcttgccacagaggagacatggcgctagtgttgagacagagtccagagatcag
cagggcagtggagagaatacgacctccgagggcaatgtgactgagaaagaagcgactatt
tcctctacagcagcagctaaagatgcttttgcaaaactcatgagtcttgaggattcatgt
cctgccactttagtaaaagatcgctcagacagcagtcttgctgatttgccacaaaagtct
gaaacaaaccttgccgttcctgaagacgttctaccgagaacagaagccagcgattcacca
acacagcaggatgttgctccatatgaagtaaaacattcctgcagacgatctaaaaggctt
tgcttggatccagacagaattatggataagcgagagaagaaaagtgtgcagaaagtgtct
gagtggttgctgaagatttctccggtttctgacgcccaagctgaaggcagtgctgaagga
gattttccgaagttcacagacagcgatgctgaaaaggagagtacagcttcaggtgtgtca
acggagatcaatgattctgctcacggtaaagctgacatgagtcctgtaagggaagtgcca
tgtagaggtctggaagaacaagtgtttggggcggtgtataaacgagagcgcaaagttatc
aagaataaagttgccaaaagtttctctcctgcacaagcgattgctcctgttgtttgttat
ggaaatctgtcggaaaaggctgaaaaggtcgagataccccagaggaggtcaagccgtagg
ttgaattcagctgacttcattaggaagacatcaaataaagatacagaagatggattagct
caagaggaagttgatgaaggaaacaaacaagaaaacggcaacacgccgttaaggtcctca
ggcaagcaggaaagggtgcagagtggtcctgataaaaatgctaaaaatgaacttactgca
gatagtccagcatttgcagtacctctgaagaaaagagggcggagatcaaagatgcaggag
gtttggcaagatgtggactgtgaattgactgaaaacgaaaacaacaccgacaacaagaaa
gatcggaagagacggagcactcgtagcactcatgacactactaaagatcacaatttggag
aaatgcaaaaatgccaaatatgccaagtcccttgctctagtaagtgctggagctgaaatt
gttgagctgagtaaggtcccaagtaatcttaatttaatcgagacagaagttaatattgaa
agttatcctagtagtgcagagatgaagtctcctgatgctcggaaaaccagacgaagccta
aggctgcaggagttcactgcggaggttcaaggtcttccgagaagaagacgatctaaacaa
gctcacccaaaacctgctgacggacctgaaaataatccatctgctaatttggatgagcaa
agtgccaagactgcttatcttggtacaagtcatattaatgattctcagagcaaaaaacca
gaatggtccatgatgagaaatggttgtgtttacaatgataactttgaaaacattgaaatc
atgcagtccagtgaggatgtggctgctctgtctatagctgaagaaaattcgcacttttct
gttgtcccagactctgtggatcgagataaacacattctcccttgttctaccaaagctgca
aacttgacaagtcccttagcagctctggttccagaatctttaccacagaaatatcagaaa
tcaccatctacaaaaacactgtcccttgctgttgagcacaaagttactgagcaagatgac
gataccaatgatagtgaacttgacacagagcaactcatgaagaccttcaaagcgaccaag
agaaaatccttctacctgggtagtcccagaacttcacactccagaacccaagagaaatcc
ctgactcagattttagaggaagacaagcaagagaatgtagatttaacagagatacgaggg
atctctctgaacattgatcaagtactgcccccaaatccatctgaggtatcagctcatgag
ataatgtctcaaaactctcaaagtggtattgcagatgttgcaagtgtcagtcttcttcag
gtaaaatcacccactcttccaaaggacacccagaaacacaattcgatcagaacctcagct
gccagtgacaaacctgagatggttgcaaattctcaagattactcaagatctcaagattcc
aggccttctgtcaaggttgaccgtgcaaattctgtccaacttttctctacaagcccgacc
gaaaaggaaacacaaatctctcataacaaggactcaacaaagtctccaaattcttcagaa
attcaaggttgcaaagtctccagcattccattgggacccttgacaagctctgaaactcag
tgtaataattttgagtcctcagtcaccccagatggccttgtaccaaatgctcctgaggct
cagctaacagaacctgaaaccactcagaacttggataagctggatgaaggagaatttaat
tctcagccatgtttgcggaagaagaggaagccccagagactggagtcttcagattctgaa
tccagtgttgaggatgatgacctgcctccactcgcccaaatatttaaagatccagtgaaa
aactctttaaaccaaaatgggcttcaagttgaagaccaaaacacaatggcaggtttagtc
ccagcaagtcaggatagtcactctcacagcgaaccagaaggtcggtcaaattcttcaagc
cagtgcgttgccccttaccagaaacagaaatctcttcaagatgtaaattctaatgatgta
cgagatggtggtatttctgaacctgcttgcatggatgagtggattacttctagtcaggga
tctgtggatctgtttgggacaccacgagaatctgaagacgcagctgggggtgccgaagac
gtagctgggggtgccaaagacgtagctgggggtcccgaagacatagctaggggtgccgag
gacgtagctgggggtgccgaagacgtagcttgtggcaaaacagggcattccatcgagtca
tctcaatgcatgagtgagattattaccactcagcagagagacgagatgcagcaggagttg
cacaggttggagagaatgatggctttagtgactgaagctctccagaagaaaggtggagac
gtggacgatacaaataagatggaggatgtcaatcagcacccgggtataagcacagggccg
cggagaagtcagcgatcctgtaaacgtggaaggcagatgtctcagagatcagaggtcaaa
ggtcagcgtgctgcagctgaggatccgaccatcgatgcgatggacgagaagaagctgaac
gagctgaagggagaaaccctgggatgtaaaacagatagcggagccagaacgcagctggtg
gcgtcggggcttagtgctgctgaacaggccctgttgaagaaatttgcaaggaagatgaag
gctggtataagcagtcatgtcactcccactacaactcacatcatcatcaagacagataga
gacttggtgtgtgagcgaacgctgaagtacttccagggaatcgctggcaggaagtgggtg
gtgagcttcctgtggatctccgagtgcttcaatcatggcaaacttttggctgaaaatccg
tacgaggtttgcggtgacgttgttaatggacgcgaccacaaaggaccccaaaaagcccga
accgctccggataataacctgctgatgaaaggatgtgagatctgcttccagggttccttc
acagatatgaccacagatcagatggaggtcatggtggagttgtgtggtgctacagtggtg
aaagatccactgatgttctccagaaagaatatctgtcatcagctggtggtggttcagccc
gaccctgatgactctcagtcgtattacgcagctctacagagaaaagccactgtagtgact
cggagttggttgttagattctgttgccacgtacacgctccaaaatccacgtgattataaa
ccgtga
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integrated database retrieval system