Tachysurus fulvidraco (yellow catfish): 113663578
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Entry
113663578 CDS
T08119
Symbol
cxcr4a
Name
(RefSeq) C-X-C chemokine receptor type 4a
KO
K04189
C-X-C chemokine receptor type 4
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03250
Viral life cycle - HIV-1
tfd03260
Virion - Human immunodeficiency virus
tfd04020
Calcium signaling pathway
tfd04060
Cytokine-cytokine receptor interaction
tfd04144
Endocytosis
tfd04672
Intestinal immune network for IgA production
tfd04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
113663578 (cxcr4a)
03260 Virion - Human immunodeficiency virus
113663578 (cxcr4a)
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
113663578 (cxcr4a)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
113663578 (cxcr4a)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
113663578 (cxcr4a)
09142 Cell motility
04810 Regulation of actin cytoskeleton
113663578 (cxcr4a)
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
113663578 (cxcr4a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
tfd04030
]
113663578 (cxcr4a)
04050 Cytokine receptors [BR:
tfd04050
]
113663578 (cxcr4a)
04090 CD molecules [BR:
tfd04090
]
113663578 (cxcr4a)
G protein-coupled receptors [BR:
tfd04030
]
Rhodopsin family
Chemokine
CXC Chemokine
113663578 (cxcr4a)
Cytokine receptors [BR:
tfd04050
]
Chemokine receptors
CXC Chemokine
113663578 (cxcr4a)
CD molecules [BR:
tfd04090
]
Proteins
113663578 (cxcr4a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
CXCR4_N
Motif
Other DBs
NCBI-GeneID:
113663578
NCBI-ProteinID:
XP_027034710
LinkDB
All DBs
Position
5:32393454..32395557
Genome browser
AA seq
364 aa
AA seq
DB search
MSYYEHIVFEDEFLNDNTTEFGSGDIGADFETPCNREGNQDLQRVLLPTVYGLIFALGLV
GNGLVVAVMGCQRKSRTMTDRYRLHLSVADLLFVLSLPFWAVDAASGWRFGGFMCVLVHM
VYTVNLYGSVLLLAFISLDRYLAVVHATSSQATRRLLSERMVYLGAWLPAALLTAPDLAF
ARAEEVGGGDETRVVCQRIYPEDTALAWMAAFRAQHVLVGFVLPGLVILVCYCVIIVTLS
RGSKGAQKRRALRTTVALVACFFACWLPYCAGIVVDTLLQLGVITHSCDLESGLETWIFV
TEALAYFHCCLNPILYAFLGVKFKKSARRALTSGRGSSLKSLAKKKGGMSSVSTESESSS
FHTS
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgtcttattacgaacatattgtatttgaggatgagttcctcaacgacaacacgaccgag
tttggctctggagacattggcgctgattttgagacgccatgcaaccgggaggggaaccag
gacctgcagagggttttgctccccacggtgtacggtttgatcttcgcgctggggctcgtg
ggtaacgggctggtggtggcggtgatggggtgccagaggaagtcgcgcaccatgactgac
cgctaccggctgcacctgtccgtggcagacctgctgttcgtgctctcgttgccgttctgg
gcggtggacgcggcgagcggctggcgattcggtggcttcatgtgcgtgctcgtgcacatg
gtgtacactgtgaacctgtacggaagcgttctcctgctcgccttcatcagcctggaccgc
tacctggccgtggtgcacgccacgagcagccaggctacgcgccgtctgctgtccgagcgc
atggtgtacctgggtgcgtggctccctgcggcgctcctcacggcgcccgacttggcgttc
gcgcgtgccgaggaagtcggcggcggggacgagacgcgcgtcgtttgccagcgaatctac
ccggaggacacggcgcttgcgtggatggcggcgttccgcgcgcagcacgttctagtcggc
ttcgtcctgcccggtctcgtgatcctggtgtgctactgcgtcatcatcgtcacgctatcg
cgcggctctaagggggcgcaaaaaaggcgcgcgctgcgcaccaccgtggctctcgtggcg
tgcttcttcgcctgctggcttccctactgcgcgggaatcgtcgtggacacgctcctgcaa
ctcggcgtcatcacgcacagctgcgatctcgagagcggcctcgagacgtggattttcgtc
accgaggcactcgcgtacttccactgctgcctcaacccgatcctttacgccttcctcggg
gtcaagtttaagaagtcggcgcggcgcgcgctcacctccggacgcggatccagtctcaag
agcctcgctaagaaaaaaggaggcatgtcctcggtgtccacggagtccgaatcgtcgagc
tttcacaccagttaa
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