Tessaracoccus flavus: RPIT_04005
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Entry
RPIT_04005 CDS
T04688
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
tfl
Tessaracoccus flavus
Pathway
tfl00300
Lysine biosynthesis
tfl00550
Peptidoglycan biosynthesis
tfl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tfl00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RPIT_04005
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RPIT_04005
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
tfl01011
]
RPIT_04005
Enzymes [BR:
tfl01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
RPIT_04005
Peptidoglycan biosynthesis and degradation proteins [BR:
tfl01011
]
Precursor biosynthesis
Amino acid ligase
RPIT_04005
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
AQP46006
UniProt:
A0A1Q2CIP5
LinkDB
All DBs
Position
895713..897191
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AA seq
492 aa
AA seq
DB search
MGDTTADVSLTGITLDSRAVQPGWLYVALPGTRAHGAQFARSAVESGAGAILTDDEGLAL
LRREDVPVVAAADVRRVMAVMAARLFGEPARGMTMLGVTGTNGKTTTVALLQAGLAAAGV
LCGTIGTIGFRLGDAEIPSTRSTVTTPESPDLQALLAVMSARGAEAVALEVSSHALALGR
VEAIEFDVVGFLNLGRDHLDFHRDVDDYFEAKAALFEPGRSKVSVIWVDDPRGKELADRV
AGHGASRLVTVGTAAGVDYRLECYRPVDPLGGTATVTRDGETLDLTLSLPGEYNMIDAAV
SLAMLEAAGTPTDAALRGLRAAQVPGRMQRVPLDGPAPMVVVDFAHTPQAVSAAVESLAV
LGPVITVLGCGGDRDADKRPHMGAAAARASALTIVTDDNPRSEPPEDIRAQTLAGARAAG
GDVVEVPGRRAAIEEALRRAAPGTVVAILGKGHERGQILADRTVDFDDAQEATHAWRRLT
EEGTQDAATLDE
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgggcgacacgacggccgacgtgtcgctcaccggcatcacgctcgattcccgcgccgtc
caaccggggtggttgtacgtggcactccccggcacgagggcccacggtgcccagttcgca
cgcagcgcggtcgaatccggcgccggagcaatcctcaccgacgacgagggcctggcgctc
ctgcggcgggaggacgtgccggtcgtcgcggccgcggacgtacggcgggtcatggccgtc
atggccgcgcgactcttcggcgagccggctcgagggatgaccatgctcggggtgaccgga
acgaacggcaagacgacgaccgtggcgttgctgcaggccgggctcgcggccgccggggtt
ctctgtggcaccatcggcacgattggattcaggctcggggacgcggagatcccatcgacc
cgctccaccgtgaccacccccgagtcgccagacctgcaggcgctactggcggtcatgtcg
gcccggggtgctgaagcggtcgcgctcgaggtcagctcccacgccctcgcgctcggccgg
gtggaggcgatcgagttcgacgtcgtcgggttcctcaacctcggccgcgaccacctcgac
ttccatcgcgacgtcgacgactacttcgaagcgaaagccgcgctgttcgagccgggccgg
tccaaggtcagcgtgatctgggtggacgacccacgcgggaaagaactcgctgacagggtg
gcgggtcacggagccagtcgcctggtgacagtcggcaccgccgccggggtggactaccgg
ctcgagtgctaccgaccggtggatccgctgggaggcaccgccaccgtgacccgcgacggt
gaaacgctggacctcaccttgtcgctgccgggggagtacaacatgatcgacgccgccgtc
agcctcgccatgctcgaggcggccggcactccgacggacgccgcactccgaggactcagg
gcggcccaggtccccggccggatgcagcgcgtgccgctcgacgggcccgcccccatggtc
gtcgtcgacttcgcgcacaccccccaggccgtgtcagcggcggtcgagtcgttggctgtg
ctcggacccgtgatcaccgtgctcgggtgcgggggagaccgggatgccgacaagcgcccc
cacatgggggcggcggcggcccgggcgagcgcgctcacgatcgtcaccgacgacaacccc
cggagcgagcctccggaggacatccgtgcgcagacgctcgcgggagcgcgtgcagcgggc
ggcgacgttgtggaggtgcctggacgacgcgccgcgatcgaagaggccctccggagggcc
gcccccggtacggtggtggccatcctcggcaagggacacgagcggggacagatcctggcc
gaccgcacggtcgacttcgatgacgcacaggaggcgacgcacgcgtggcgccgtctgacg
gaggaagggacgcaggatgcggccacgcttgatgagtga
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