Trachypithecus francoisi (Francois's langur): 117064099
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Entry
117064099 CDS
T07225
Symbol
SMCHD1
Name
(RefSeq) structural maintenance of chromosomes flexible hinge domain-containing protein 1 isoform X1
KO
K23113
structural maintenance of chromosomes flexible hinge domain-containing protein 1
Organism
tfn
Trachypithecus francoisi (Francois's langur)
Brite
KEGG Orthology (KO) [BR:
tfn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tfn03036
]
117064099 (SMCHD1)
03400 DNA repair and recombination proteins [BR:
tfn03400
]
117064099 (SMCHD1)
Chromosome and associated proteins [BR:
tfn03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
117064099 (SMCHD1)
DNA repair and recombination proteins [BR:
tfn03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
117064099 (SMCHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMCHD1_S5
SMC_hinge
HATPase_c_3
HATPase_c
Big_1
Motif
Other DBs
NCBI-GeneID:
117064099
NCBI-ProteinID:
XP_033034099
LinkDB
All DBs
Position
Unknown
AA seq
2009 aa
AA seq
DB search
MAAADGGGPGGASVGTKEDGGGVGHRTVYLFDRREKESELGERSLQVGERSDYAGFRASV
CQTLGISPEEKFVITTTSRKEITCDNFDETVKDGVTLYLLQSVNQLLLTATKERIDFLPH
YDTLVKSGMYEYYASEGQNPLPFALAELIDNSLSATSRNIGVRRIQIKLLFDETQGKPAV
AVIDNGRGMTSKQLNNWAVYRLSKFTRQGDFESDHSGYVRPVPVPRSLNSDISYFGVGGK
QAVFFVGQSARMISKPADSQDVHELVLSKEDFEKKEKNKEAIYSGYIRNRKPSDSVHITN
DEERFLHNLIIEEKEKDSFTAVVITGVQPEHIQYLKNYFHLWTRQLAHIYHYYIHGPKGN
EIRTSKEVEPFNNIDIEISMFEKGKVPKIVNLREIQDDMQTLYVNTAADSFEFKAHVEGD
GVVEGIIRYHPFLYDRETYPDDPCFPSKLKDEDDDDDCFILEKAARGKRPIFECFWNGRL
IPYTSVEDFDWCTPPKKRGLAPIECYNRISGALFTNDKFQVSTNKLTFMDLELKLKDKNT
LFTRILNGQEQRMKIDREFALWLKDCHEKYDKQIKFTLFKGIITRPDLPSKKQGPWATYA
AIEWDGKIYKAGQLVKTIKTLPLFYGSIVRFFLYGDHDGEVYATGGEVQIAVEPQALYDE
VRTVPIAKLDRTVAEKAVKKYVEDEMARLPDRLSVTWPEGDELLPNEIRPAGTPIGALRI
EILNKKGEAMQKLPGTSHGGSKKLLVELKVILHSSSGNKEIISHISQHGGKWPYWFKKME
NIQKLGNYTLKLQVVLNESNADTYAGRPLPSKAIKFSVKEGKPEKFSFVLLDHHFRVGVP
FNIPLEFQDEFGHTSQLVTDIQPVLEASGLSLHYEEITKGPNCVIRGVTAKGPVNSCQGK
NYNLKVTLPGLKEDSQILKMKLLPGQPRRLKVKPDSEILVIENGTAFPFQVEVLDESDNI
TAQPKLIVHCKFSGAPNLPVYVVDCSSSGTSILTGSAIQVQNIKKDQMLKARIEIPSCKD
VAPVEKTIKLLPSSHVARLQIFSVEGQKAIQIKHQDEVNWIAGDIMRNLIFQMYDEGERE
INITSALAEKIKVNWTPEINKEHLLQGLLPDVQVPTSVKDMRYCQVSFQDDHVSLESAFT
VRPLPDEPKHLKCEMKAGKTVQIGQELQGEVVIIITDQYGNQIQAFSPSSLSSLSIAGVG
LDSSNLKTTFQENTQSISVRGIKFIPGPPGNKDLCFTWHEFSDFIRVQLISGPPAKLLLI
DWPELKECIPVINGRDLQNPIIVQLCDQWDNPAPVQHVKISLTKASNLKLTPSNQQHKTD
EKGRANLGIFSVFAPRGEHTLQVKAIYNKSIIEGPIIKLMILPDPEKPVRLNVKYDKDAS
FLAGGLFTDFMISVISEDDSVIKNINPARISMKMWKLSTSGNRPPANAETFSCNKIKDND
KEDGCFYFRDKVIPNKVGTYCIQFGFMMDKTNILNSEQVIVEVLPNQPVKLVPKIKPPTP
AVSNVRSVASRTLVRDLHLSITDDYNNHTGIDLVGTIIATIKGSNEEDTDTPLFIGKVRT
LEFPFVNGSAEIVSLVLAESSPGRDSTEYFIVFEPRLPLLSRTLEPYILPFMFYNDVKKQ
QQMAALTKEKDQLSQSIIMYKSLFEASQQLLNEMKCQVEEARLKEAQLRNELKIHNIDIP
TTQQVPHIEALLKRKLSEQEELKKKPRRSCTLPNYTKGSGDVLGKIAHLAQIEDDRAAMV
ISWHLASDMDCVVTLTTDAARRIYDETQGRQQVLPLDSIYKKTLPDWKRPLPHFRNGKLY
FKPIGDPVFARDLLTFPDNVEHCETVFGMLLGDTIILDNLDAANHYRKEVVKITHCPTLL
TRDGDRIRSNGKFGGLQNKAPPMDKLRGMVFGAPVPKQCLILGEQIDLLQQYRSAVCKVD
SVNKDLNSQLEYLRTPDMKKKKQELDEHEKNLKLIEEKLGMTPIRKCNDSLRHSPKVEMT
DCPVPPKRMRREATRQNRNEKARYSGSRL
NT seq
6030 nt
NT seq
+upstream
nt +downstream
nt
atggcagcggcggacggcggcgggcccggcggggcctctgtgggtactaaggaggatggc
ggaggcgtcggccacaggacggtgtacttgtttgaccggcgcgaaaaggagtccgagctc
ggggagcggtctctgcaggtcggggagcgctcggactacgcgggatttcgcgcctctgtg
tgtcagacacttggcatttcacctgaagaaaaatttgttattacaacaacaagtaggaaa
gaaattacctgtgataattttgatgaaactgttaaagatggagtcaccttgtacctgcta
cagtcagtcaatcagttactactgacagctacgaaagaacgaattgacttcttacctcac
tatgacacactggttaaaagtggcatgtatgaatattatgccagtgaaggacaaaatcct
ttgccatttgctcttgcggaattaattgacaattcattgtctgctacttctcgtaacatt
ggggttagaagaatacagatcaaattgctttttgatgaaacacaaggaaaacctgctgtt
gcagtgatagataatggaagaggaatgacctctaaacagcttaacaactgggccgtgtat
aggttgtcaaaattcacaagacaaggtgactttgaaagtgatcattcaggatatgttcgt
ccagtaccagtgccacgcagtttaaatagtgatatttcctattttggtgttgggggcaag
caagctgtcttctttgttggacaatcagccagaatgataagcaaacctgcagattcccaa
gatgttcatgagcttgtgctttctaaagaagattttgagaagaaggagaaaaataaagag
gcaatatatagtggatatattagaaacagaaagccctctgattctgttcacattacaaat
gatgaggaaagatttctacataatcttatcatagaggagaaggaaaaagatagctttact
gctgtggttatcacaggggtacaaccagaacacatacagtacttgaaaaattatttccac
ctttggacacgacagttagcgcatatttatcattactatattcatggcccaaaaggaaat
gaaatacgaacatcaaaagaagttgaacctttcaacaatattgatattgaaatttctatg
tttgaaaaagggaaggtacctaagattgtcaacctaagggaaatacaagacgacatgcag
acgttgtatgtaaacacagcagctgacagttttgaattcaaagctcatgttgaaggagac
ggtgtagtggaagggattatccgttatcatccattcttatatgatagagaaacctaccct
gatgatccatgctttccatcaaaattaaaagatgaagatgatgatgatgattgtttcata
cttgagaaagcagccagagggaaaaggcctatttttgaatgtttttggaatggacgatta
ataccatatacatcagttgaagactttgactggtgtactcctcctaagaagagagggctt
gcaccaattgaatgctacaatagaatatctggtgcattattcactaatgacaaattccag
gtcagcacaaataaactgacttttatggatcttgagctaaaattgaaagataagaacacc
ctttttacaaggattttaaatggacaggaacagcgaatgaaaattgacagagaatttgct
ttgtggctgaaggattgtcatgaaaagtatgataaacaaataaaatttacgctttttaag
ggaataattacacgtcctgatcttccttctaaaaagcaaggtccctgggcaacatatgca
gcaatagaatgggatggaaagatatacaaagcaggacagctggtcaagacaatcaagaca
cttcctctcttttatggaagcatagtaagattttttctttatggcgatcatgatggagaa
gtatatgctactggaggagaggttcaaattgcagtggaacctcaggcactatatgatgaa
gtaagaactgtgccaattgcaaagctggataggacagttgctgagaaagctgttaaaaag
tatgtagaagatgaaatggcaaggctccctgatagattgtcagtaacttggcctgaagga
gatgaattattgcctaatgagattaggcctgctggaacccctattggtgcattaagaatt
gaaatattgaataaaaaaggggaagcaatgcaaaagcttccaggaacaagtcacggaggg
tcaaaaaaactcctggttgagctcaaagttattttacattcttcaagtggaaataaagag
attatttcgcatattagtcaacatggaggaaaatggccttactggtttaaaaaaatggaa
aacattcagaagttggggaattataccttgaaattacaagttgtgttgaatgaaagtaat
gcagacacttatgcaggaagaccactaccatctaaagcaattaagttttctgttaaagag
ggtaagccagagaaattttcatttgttcttctggatcatcattttcgtgttggagttcca
tttaatatccctctggagtttcaggatgaatttggtcataccagtcaactagtaactgat
attcagccagttcttgaagcaagtggtttatctttacattatgaagaaataaccaaagga
ccaaattgtgtaattcgaggtgttacagctaagggccctgtaaactcttgtcaaggcaag
aattataatctgaaggttactctgccgggcttaaaagaagactcacagattttgaaaatg
aaattactacctggtcagcctcgtcgattgaaagtgaaacctgattccgaaattttagtt
atagaaaatggaacagctttcccatttcaggtggaagttttagatgaatcagacaacata
acagcacaaccaaaactgattgttcattgtaagttttcaggtgctccaaaccttccagtc
tatgttgtagattgcagtagttccggaaccagtattttaacaggatctgcaattcaagtt
cagaatattaaaaaagaccagatgcttaaagcaagaattgaaatacctagttgtaaagat
gtggcacctgtggagaaaactattaagttacttcccagtagccatgttgcaagactacaa
atattcagtgtggaaggacaaaaggcaattcagatcaaacatcaggatgaggttaattgg
atagcaggtgatattatgcgtaatcttatttttcaaatgtatgatgaaggagaaagagaa
atcaatataacatccgctttagcagaaaaaattaaagttaattggactcctgagattaac
aaagaacacttgctacagggtcttcttcctgatgtgcaagtaccaacatctgtaaaagat
atgcgctattgccaggtttcattccaagatgatcatgtgtctttggaaagtgcatttaca
gtaagaccacttcctgatgaacctaaacatttaaaatgtgagatgaaagcaggaaaaacc
gtacagattggccaagagcttcaaggagaagtagttataataattacggatcagtacgga
aatcagattcaagcattttcaccaagttctttatcttctttgtcaattgctggggttgga
cttgatagctcaaatttgaaaacaacctttcaggaaaacacacagagtataagtgtaaga
ggcatcaaatttattccaggtcctcctggaaataaggatctttgttttacttggcacgag
ttttctgactttattcgagtgcaactaatttctggacctcctgctaaacttcttcttata
gactggccagaactgaaggagtgcattccagtgattaatggaagagatttacagaaccct
attattgttcaactttgtgatcagtgggataatccagcaccggtacaacatgttaaaata
agtcttacaaaagctagcaatttaaagctcacgccttcaaaccaacagcataaaacagat
gagaaaggcagggctaatttgggaatattcagtgtttttgcccctagaggagagcatact
ctgcaggttaaagccatctataacaaaagtatcatagaaggacctataattaagttaatg
attcttccagatccagaaaaacccgttcgtctcaatgttaaatatgacaaagatgcttcc
ttcttagcaggaggtcttttcactgattttatgattagtgttatttctgaagatgacagt
gtcattaaaaatattaatccagcacgtatttccatgaaaatgtggaagctatctaccagt
gggaaccgacccccagcaaatgcagaaacatttagttgtaataaaataaaagataatgac
aaggaagatggctgcttctatttcagggataaagtaattcctaataaagtggggacatat
tgtatccagtttggttttatgatggataaaacaaatattctcaacagtgaacaggttata
gttgaagtcctgcctaatcaacctgtgaagttagtacctaaaattaaaccacctacacca
gctgtttctaatgttcgctcagttgccagtaggaccttggtcagagatctacatcttagt
atcacggatgactacaacaaccatactggaattgatttggttggcactataatagccacc
attaaaggctctaatgaggaagatactgataccccactctttatcgggaaagttagaaca
cttgaattcccttttgtgaatggttcagctgaaatcgtgagtctggtgctggcagaaagt
agtcctggaagggacagtactgaatattttattgtatttgagccccggctaccactttta
tcaagaaccttagaaccatatatcctaccattcatgttttacaatgatgttaagaagcag
caacaaatggcagcacttacaaaagaaaaggaccaattatctcagtctattattatgtat
aaaagtttatttgaagccagccaacagcttcttaatgaaatgaaatgtcaagttgaagaa
gcaagattaaaagaggcccaattgcgaaatgaactaaaaatacataatattgacattcct
acaacacaacaggtgccacacattgaagcgcttctgaaaagaaagctatcagaacaggaa
gaactgaagaaaaaacctagaagatcatgtactcttccaaactatactaaaggcagtggg
gatgttttgggaaagattgcacatctagcacaaattgaagatgatagagctgcgatggtt
atttcttggcatctggcaagtgacatggactgtgtagtcaccctaaccactgatgctgca
cgtcgtatctatgatgaaacccaaggtcgtcagcaggtgttgccccttgattctatttat
aagaagactcttccagattggaaaagacctctacctcatttccgaaatggaaaattgtat
tttaaacccattggagatccagtctttgctcgagacttgttaacatttccagataatgta
gaacattgtgaaacagtatttggtatgctgttaggagacaccattattttggataatctg
gatgcagccaatcattatagaaaagaggttgttaaaattacacactgccctacactgctg
accagagatggagatcgaattcgaagtaatggaaagtttgggggccttcagaataaagct
cctccaatggataaacttcggggaatggtatttggagctccagtaccaaaacagtgtctg
atcttaggggaacaaatagatcttcttcagcagtatcgttctgctgtgtgcaaagtagac
agtgtgaataaggatcttaacagtcaattagagtaccttcgcactccggatatgaagaag
aaaaagcaagaacttgatgaacatgagaaaaatctcaaactaatagaggaaaaactaggt
atgactcccatacgtaagtgtaatgactcattgcgtcattcaccaaaggttgagatgaca
gattgtccagttcctcctaaaagaatgagacgagaagctacaagacaaaataggaatgaa
aaggccaggtacagtggctcacgcctataa
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integrated database retrieval system
