KEGG   Thiorhodovibrio frisius: Thiofri_02425
Entry
Thiofri_02425     CDS       T09561                                 
Symbol
casD
Name
(GenBank) CRISPR system Cascade subunit CasD
  KO
K19125  CRISPR system Cascade subunit CasD
Organism
tfri  Thiorhodovibrio frisius
Brite
KEGG Orthology (KO) [BR:tfri00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:tfri02048]
    Thiofri_02425 (casD)
Prokaryotic defense system [BR:tfri02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Subtype I-E factors
    Thiofri_02425 (casD)
SSDB
Motif
Pfam: Cas_Cas5d
Other DBs
NCBI-ProteinID: WPL22265
LinkDB
Position
2545760..2546524
AA seq 254 aa
MNRFLLFRLHGALAAWGDIAVGEQRPSTPHPSKSIVLGLVAAALGLKREDDDAHAALRDG
YGFAVRVDSAGTPLRDYHTTQYPKTTSRLHHLRTRRDELADSGNRATVLSTRDYRSDSLY
VVGLYQRGLDNVPEPDTLADALRRPKFTLYLGRRSCPAALPLAPRVIEAADFKAALADYD
EAARHDGQQAFLEDARVARLSSGCEYYWEDGLPVGLESLQSTPRHDQPQSRARRQFAART
EHYANQGGKEAWAT
NT seq 765 nt   +upstreamnt  +downstreamnt
atgaacagatttttgctgttccggctgcatggagcgctcgccgcttggggtgacattgct
gtcggcgagcaacgaccgagcactccccacccatcaaaatccatcgtgctcgggcttgtc
gctgcggcgctcggcctgaaacgcgaggacgacgacgcccatgcggcgctgcgcgatggc
tatggtttcgcggtgcgcgtcgactccgccggcacgccattgcgcgactaccacacgacc
caataccccaagacaaccagccggctacatcacttgcgcacccgtcgcgacgagttggcg
gattcgggtaatcgcgccacggtcctttccacccgtgactaccgcagcgacagtctctat
gtggttggcctgtatcagcgtggtctggacaatgtgcccgagccagacaccctggccgat
gcgttgcgtcggccaaagttcaccctttatctcgggcgccgttcctgtccggccgcactg
cccttggctccgcgcgtcatcgaagcggccgatttcaaggcggcgctggctgactatgac
gaagccgcacgccatgacggccagcaagcttttctggaggatgcgcgcgtcgcacgcctg
agcagcggttgcgaatactattgggaggacggtctgccggtcgggctcgagtcgctgcaa
tcgacaccgcgccacgatcaacctcagtcgcgcgcgcgtcgtcaattcgcggcacgcacc
gagcattacgccaatcagggagggaaggaggcatgggctacctga

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