Takifugu flavidus (sansaifugu): 130513198
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Entry
130513198 CDS
T09160
Symbol
c9orf72
Name
(RefSeq) guanine nucleotide exchange factor C9orf72 homolog
KO
K23609
guanine nucleotide exchange protein C9orf72
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
130513198 (c9orf72)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tfs04131
]
130513198 (c9orf72)
Membrane trafficking [BR:
tfs04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
130513198 (c9orf72)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C9orf72-like
Motif
Other DBs
NCBI-GeneID:
130513198
NCBI-ProteinID:
XP_056867850
LinkDB
All DBs
Position
16:complement(14134412..14143472)
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AA seq
462 aa
AA seq
DB search
MSSGGPPQSPAVAKTEVALEGECPLLAATFAYWDNILGPRVHHIWAPKCDHLVFLSDGEV
TFLANHTLNGEILRSAECGAVDVKFFVLAEKGVIIVSLIFDGELKGDKNTCALSVILPQT
ELAFYLPLHNICVERLKHVIRKGRIWMQKGYNIISVLSLEIIPIMELLASMKTHSVPEDI
DIKDTVLNDDDIGDSCHEDFLHKAISSHLQTCGCSIVVGSNPEKINKIVRTLCLFLTPTE
RRCSRLCRAEASFRYDTGLFVQGLLKDSTGSFVLPFRQVLYSPYPTTHIDVDVNTVKQMP
PCHEHIYNQRRYMRSELSALWKTDSEEDIPPDTIIHTSETFTPDLNIFQDVAHRDTLVKS
FIDEVFMLKPGLSLRSTFLAQFLLLLHRKALTLLKYIEDDTQKGQKSFRSLRNLKTDLDL
TVEGDLNIVMAFAEKLRGGLHSFVFGKPFYTSVQERDALLSF
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccgggggcccacctcagtctcctgcggtggccaaaacggaggtggcccttgaa
ggggaatgcccgctgctggctgccacctttgcctactgggacaacatcctgggtccaagg
gtgcaccacatctgggccccaaagtgtgatcatctggtgttcctcagtgatggagaagtc
acatttttggccaatcacactcttaacggggagattttgcgtagcgctgagtgcggcgcc
gtggatgtgaaattctttgtcctggcagaaaaaggcgtcatcatcgtgtctttgatattt
gatggtgagctgaagggggacaaaaacacatgtgccctgtctgtcatcctgccgcagacg
gagctggccttttatctgccgctgcacaacatctgtgtggagaggctcaagcacgtcatc
cgcaagggacgcatttggatgcagaagggctacaacatcatttcagtgttgagcttggag
attatccccatcatggagttattggcgtccatgaagacccacagcgtgccagaagacatc
gatataaaagacactgtgctaaatgatgatgacattggagatagctgccatgaggatttc
cttcacaaggccatcagctcccatctgcagacatgcggctgttccatcgtggtgggaagc
aatccggagaaaataaataagattgtgcggaccctctgcctcttcctcacccccaccgag
aggaggtgctcccgcctgtgtcgagccgaggcgtccttcagatatgacactggcctgttt
gtgcagggcctccttaaggactccacaggcagcttcgttctgcccttccgccaggtgctt
tactccccttaccccaccacgcacatcgatgttgacgtcaacacggtcaagcagatgcct
ccgtgccacgagcacatctacaaccagcgccggtacatgcggtccgagctcagtgcgctc
tggaagacggacagtgaggaggacatcccccccgacacgatcatccacaccagcgaaacc
ttcactcctgacctgaatatatttcaagatgttgcacacagagacactttggtcaagtcg
tttatagatgaggtgttcatgctgaagcccggcttgtcccttcggagcaccttcctggcc
cagttcctgttgctgctccacagaaaggccctcacactgctcaagtacatcgaagatgac
acgcaaaaagggcagaagtcctttcgatctctgcggaatttgaagacggacctggatctg
acagtggaaggagacttgaacatcgtcatggccttcgcggagaagctgaggggggggctg
cactcgtttgtgttcgggaagccgttctacaccagcgtacaggagcgagacgcactcctg
agcttctga
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