Takifugu flavidus (sansaifugu): 130514717
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Entry
130514717 CDS
T09160
Name
(RefSeq) E3 ubiquitin-protein ligase RBX1
KO
K03868
E3 ubiquitin-protein ligase RBX1 [EC:
2.3.2.32
]
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs03420
Nucleotide excision repair
tfs04110
Cell cycle
tfs04114
Oocyte meiosis
tfs04120
Ubiquitin mediated proteolysis
tfs04141
Protein processing in endoplasmic reticulum
tfs04310
Wnt signaling pathway
tfs04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
130514717
04120 Ubiquitin mediated proteolysis
130514717
09124 Replication and repair
03420 Nucleotide excision repair
130514717
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
130514717
04350 TGF-beta signaling pathway
130514717
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
130514717
04114 Oocyte meiosis
130514717
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tfs04121
]
130514717
03400 DNA repair and recombination proteins [BR:
tfs03400
]
130514717
Enzymes [BR:
tfs01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.32 cullin-RING-type E3 NEDD8 transferase
130514717
Ubiquitin system [BR:
tfs04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
130514717
Multi subunit type E3
SCF complex
Ring finger protein
130514717
Cul2 complex
130514717
Cul3 complex
130514717
Cul4 complex
130514717
Cul7 complex
130514717
Cul8 complex
130514717
Cul9 complex
130514717
DNA repair and recombination proteins [BR:
tfs03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
130514717
TCR (transcription coupled repair) factors
Cul4-CSA complex
130514717
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-rbx1
zf-ANAPC11
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-RING_11
DUF8003
PHD_NSD
Motif
Other DBs
NCBI-GeneID:
130514717
NCBI-ProteinID:
XP_056870457
LinkDB
All DBs
Position
18:3819153..3821362
Genome browser
AA seq
108 aa
AA seq
DB search
MAAAMDVDTPTGANSGASKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQ
ASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH
NT seq
327 nt
NT seq
+upstream
nt +downstream
nt
atggctgccgcgatggacgttgacacaccgactggcgcaaacagtggagccagcaaaaag
cgttttgaagttaaaaagtggaacgccgtcgcgctgtgggcctgggacattgtggtggat
aactgtgcaatctgtaggaaccacattatggatctctgtatagaatgccaggccaaccag
gcttctgccacgtctgaggagtgcaccgtggcctggggcgtgtgcaatcatgctttccac
ttccactgcatctctcgctggttgaaaaccagacaggtgtgcccgctggacaacagggag
tgggaatttcagaaatatggacattag
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