Takifugu flavidus (sansaifugu): 130514721
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Entry
130514721 CDS
T09160
Symbol
smcr8a
Name
(RefSeq) guanine nucleotide exchange protein smcr8a isoform X1
KO
K23611
guanine nucleotide exchange protein SMCR8
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
130514721 (smcr8a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tfs04131
]
130514721 (smcr8a)
Membrane trafficking [BR:
tfs04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
130514721 (smcr8a)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Folliculin
Motif
Other DBs
NCBI-GeneID:
130514721
NCBI-ProteinID:
XP_056870465
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All DBs
Position
18:3882285..3887619
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AA seq
914 aa
AA seq
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MIGSPDVVALTKEDEYLVTDPDPWVLPKEFNIPLQPQNDLNPWAKTSYAKFTKDFILISE
FSEQVGPQPLLTIPDDPKVCGTFDLNYFSLRIMSVDYQASFVGHPPGTGYPRLSFVEDSR
VVLGDSKEGAFAYVHHLTLYDLEARGFVRPFCMAYVSADERKIMLQFQELSLRFSQASEC
LKAGNRRAFAKELQRKLRDLEYTHSVLQREEGLQREAGPRCVYSAHAVEKANELANVEKS
IYEHRDLLRQISSYHQRPRRDPHAVTCQKCVTECLNECEELLNKYGKLASLFTCGANERR
GEDGEGERGDEREEGCEEEDEAIKRRPSYTPQLIKAKSAKCFDKRLKTLQELCDDTFYKA
TIDLLQETEKVFRGDLSNLHTRRLERDLCRKQNPTNFLFEENLDADEDEAGRLRPLCAVN
HAVHNDELSNPPPTVVLKDLDAKEPSDLLGLVESHLESSASDQTPETQESSEETKGSFSS
EKSGKYQAEKQQDLASEAADSDPSHDLNTDPDRETSSEEIDTTNGDDEGDQTPVSLLEVV
SELEDTDTATDDICVVQSDMLVPIDTACCMAQESLLYEASAPEMPHHHQSSHLQRSADQV
VNQEPQSLLPLPDEYAVGYPPSESVTTNGLELPVGMHGDTVSRSSAEDGSDCTMSVSIGT
GQAASTLGYGGSRSMCHRKKVGQGALRFVRQYPFAMQAIWCLLSGRSLVVLGADEGRVRR
LVAALALFVPAPGKCGERVQPWLSCPITLTDLQRWKLIGLQRVASPLGASVLYSLSRYSR
YISILDADQKTLRCPPYCGQLLANIADHRTFIRRGSTYFLHLQSTLCRLAAKAFLYTFTH
HLHLPVSSTEGPEAVEGRRRCFLQDQLGLGEEDRQIVLYLSQLITRHYLQPDAGTTTASA
PFSFDYTSSIFYKI
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atgataggatcacctgatgtggtggcactcactaaagaggatgagtatttagtgacagat
ccagacccctgggttctgcccaaggagttcaacatccccctccaaccacagaatgacctc
aatccctgggcaaaaacctcatatgccaagttcaccaaagacttcatcctcatctcagag
ttctctgagcaggtgggccctcagcctctcctcactattcccgatgaccccaaagtctgt
ggcaccttcgacctcaattacttctccctgcgcatcatgtcagtggactaccaggcttca
tttgtggggcacccacctggcaccggctacccaaggctcagctttgtggaggactccagg
gtggtgctgggtgactcgaaggagggggcctttgcctatgtccaccatcttacactttac
gacctggaggcgaggggcttcgtgcgaccgttctgcatggcatatgtctcagcggacgag
aggaagatcatgctccagtttcaggagctgtccctccgcttctcgcaggcctctgagtgt
ctgaaggctggaaacaggagagcattcgctaaagaactccagcggaagctccgggacctt
gaatacacacactccgtgctgcagagggaggaaggcctgcagagggaggcggggcctcgg
tgtgtatattccgctcatgctgtggaaaaggccaatgagctcgcaaacgtggaaaagagc
atctatgaacacagggacctgttgaggcagatcagctcctaccatcaacgtcctcgccga
gatcctcatgctgtcacctgccaaaagtgcgtcacggagtgcttgaacgaatgcgaggag
ctgttaaacaaatacggcaagcttgccagcctctttacctgtggcgccaatgagaggcgg
ggtgaggacggagaaggtgaacggggggatgaaagagaggaagggtgcgaggaggaagat
gaagccatcaagcgacggccgtcctacacgccacaattgatcaaagccaaatcagcaaag
tgttttgacaagcgtctgaagactcttcaagagctgtgtgacgatactttctacaaggcc
actatagacctcctgcaggagacagagaaggtttttagaggggatctgagcaatcttcac
acgcgtcggctggagagggatctttgtcggaaacagaacccaaccaattttctgtttgag
gagaatctcgatgctgatgaggatgaagcgggaagactgagacccctctgtgctgtgaac
catgctgtacataatgacgaactctcaaatcctccccctactgtggtacttaaagacctt
gatgctaaagagccttcagatctcctagggctggtggagagccatctagaatcttctgct
tcggaccagactccagaaacccaagagagctcagaagaaacaaaaggaagtttcagtagt
gaaaagagtgggaaataccaggcagaaaaacaacaggatttggcatctgaagctgccgat
tctgaccccagccacgatcttaacaccgacccagacagggagaccagcagtgaagagatt
gacaccactaatggggatgatgagggtgaccagacacctgtgtctttgctggaagtggtg
tctgagctggaggacactgacactgcaactgatgacatttgtgtcgtgcagtccgatatg
ttggttcctatagacacagcttgttgtatggcccaagaaagtctcctttacgaagcttca
gcaccagagatgcctcaccatcatcaaagctcccaccttcaacgctctgctgatcaggta
gtcaaccaggagccccagtccctgcttccactgccagatgagtatgcggtgggctatcct
ccctcagaaagtgtcaccaccaatgggttggagcttcccgtaggaatgcatggagatact
gtttcccgcagctcagcggaggatgggtcagactgtaccatgagtgtgtccatagggaca
ggtcaggctgcctcaactcttggttatggaggttccaggtccatgtgtcaccggaagaag
gtgggccaaggagccttgaggtttgtgcggcagtatccctttgctatgcaagcgatttgg
tgtctactgagtggtcgcagcctggttgtgctcggggccgacgaaggtcgcgtccgccgg
ctggtagctgctctggccctctttgtgcctgctcctgggaaatgtggagagagggtccaa
ccgtggctatcctgccccatcacccttactgaccttcagagatggaaactaataggacta
caaagagtagcctctcctctgggcgctagtgtgctttactcactgtcccgctacagtcgc
tacatctccatcctggacgctgatcagaagaccctgcgctgtccaccatattgtggacag
ctgctcgccaacattgcagaccatcgcactttcatccgtcgtggctccacctacttcctg
cacttgcagagcactctctgccgcctggcagccaaggccttcctctacaccttcactcac
cacctccacttgccagtcagctccacggagggccccgaggcggtggagggccgacgccgc
tgcttcctgcaggatcagctgggcctgggggaggaggacagacagatagtgctgtatctc
agccagctcatcactcgccactacctacagccagacgctgggaccacaacagcatcggct
ccgtttagttttgactacaccagcagcattttttacaaaatctaa
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