Takifugu flavidus (sansaifugu): 130515357
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Entry
130515357 CDS
T09160
Symbol
eftud2
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130515357 (eftud2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tfs03041
]
130515357 (eftud2)
Spliceosome [BR:
tfs03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
130515357 (eftud2)
Complex C
U5 SnRNP specific factors
130515357 (eftud2)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
EF-G_D2
MMR_HSR1
Ras
Motif
Other DBs
NCBI-GeneID:
130515357
NCBI-ProteinID:
XP_056871502
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All DBs
Position
18:10848123..10857616
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AA seq
971 aa
AA seq
DB search
MEADLYDEFGNYIGPELDSDDDEDELDAEDRDVDEGDEDDEDEPADADDDVPGMEVVLHE
DKKYYPTAEEVYGPEVETIVQEEDTQPLTEPIIKPVRHRQFTLMEQELPATVYDMEFLAD
LMDSSELIRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKRYDVDLRYTDTLFTEQERGVGI
KSTPVTMVLPDSRGKSYLFNVMDTPGHINFSDEVTSSIRISDGIVLFIDAAEGVMLNTER
LIKHAVQERMAITICINKVDRLILELKLPPTDAYYKLRHIVDEVNGLLNTYSTDETMVVS
PLLGNVCFASPQYSICFTLGSFAKIYADTYGDINYTEFSKRLWGDIYFNPKTRKFTKKAP
TSNSQRSFVEFVLEPLYKILSQVVGDVDTSLPRVLDELGIHLSKEELKLNIKPLLRLVCN
RFFGEFTGFVDMCVQHIPSPQGGARTKIEHTYTGGLDSDLAEAMTECDPEGPLMCHTTKM
YSTEDGVQFHAFGRVLSGTIQAGQPVKVLGENYTLEDEEDSQICTVGRLWISVARYQIEV
NRVPAGNWVLIEGCDQPIVKTATITEPRGNEEAQIFRPLKFNTASVIKIAVEPVNPSELP
KMLDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADPVVT
FCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQITWNRKKLGEFFQTK
YDWDLLAARSIWAFGPDTTGPNILVDDTLPSEVDKALLGSVKDSIVQGFQWGTREGPLCD
EPIRNVKFKILDAVIAQEPLHRGGGQVIPTARRVVYSAFLMATPRLMEPYYFVEVQAPAD
CVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFALSVF
HHWQIVPGDPLDKSIVIRPLEPQPAPHLAREFMIKTRRRKGLSEDVSISKFFDDPMLLEL
AKQDVVLNYPM
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atggaagccgatctgtatgatgagtttggtaactacatcggtccagagctggattctgac
gatgatgaagatgaactggatgcagaggacagagatgttgatgagggtgatgaggatgat
gaagatgaacccgccgatgctgatgacgatgtcccaggtatggaggtcgtacttcacgag
gacaagaaatactatcctactgcagaagaggtgtatggaccagaggtggaaaccattgtc
caagaggaagacacacaacctcttacagagcccattattaagccagtaaggcaccggcag
tttaccctgatggagcaggagttacctgccaccgtgtatgatatggaattcctcgcagac
ctgatggacagttctgagctgatccgaaatgtcactctgtgcggacacctccatcatggc
aagacctgctttgtggactgcctgattgaacaaacacatccagaaatcaggaagagatat
gatgttgatctccgatacacagacacgctgttcacagaacaagagaggggcgttggcatc
aagagtacccccgtcacaatggtgttgcctgactccagaggcaaatcttatcttttcaac
gttatggatactccaggccacataaacttctctgatgaggtcacatcaagtatccggatc
tcggacggaattgtcctcttcatagatgcagcagaaggggtgatgttgaacacagagcgc
ctgattaaacatgctgtccaggagcgaatggccatcaccatctgcatcaacaaggtggac
aggctgattctggagctcaaattacctcccacagatgcttattataaacttcgccacatt
gtagacgaggtcaacggtttgctgaacacgtactccacagatgagaccatggtggtctct
cctctgcttggaaatgtgtgtttcgccagccctcagtacagcatctgcttcaccctgggc
tcttttgctaaaatctacgcagacacatacggagacatcaactataccgagttttccaag
aggctctggggtgacatttactttaaccctaaaacccgcaagtttaccaagaaagctccc
accagtaattcccagcgcagttttgtggaatttgtcctggaacctttgtataagattctc
tctcaggtggtgggggacgtggacacgtctctcccacgagttctagatgagctggggatc
catctctctaaagaggagctcaagctgaacatcaaacctttgcttaggttggtgtgtaac
cgcttctttggagaattcaccggctttgtggacatgtgtgtgcaacacatcccctcacca
caggggggtgctagaaccaagatagagcatacctatacaggagggctggactcggacctg
gcagaggcgatgacagagtgtgatcctgaaggtcctttgatgtgccacaccactaagatg
tacagcacagaggacggggttcagttccatgcatttggcagggtgctcagtgggaccatc
caggcagggcaacctgtcaaggttttaggagagaactacactctggaagatgaggaggac
tcacagatctgcactgttggccgtctttggatttcagttgccaggtaccaaattgaggta
aacagagttcctgctggaaactgggtcctcatcgaaggttgcgaccagcccattgtcaag
accgccacgatcactgagcccagagggaacgaggaggctcagattttcaggccattgaag
ttcaacacggcatcagttatcaaaattgccgtggagcctgtcaacccatcagagctccca
aagatgttggatggtctgaggaaggtcaacaagagttatccatcgctcaccacaaaggtg
gaagagtcaggagagcacgttatcttgggaacaggggagctttacttggactgtgtcatg
cacgacctgcgcaagatgtactctgaaattgacattaaagtcgccgaccccgttgtgacc
ttttgtgagacggttgtggagacgtcgtcactcaagtgctttgctgaaacgcccaacaaa
aagaataagatcaccatgattgcagagcccctggagaagggactggctgaggacattgag
aacgaagttgtgcagatcacatggaacaggaagaagctgggcgagtttttccagacaaag
tatgactgggatctgctggctgccaggtccatctgggcctttggaccagacaccacgggt
ccaaacatcctcgtggacgacacgctgccctctgaggtggacaaggcgctgctgggctcg
gtcaaagacagcatcgttcagggcttccagtggggcaccagggaggggcctctgtgcgac
gagccgatcaggaacgtcaagtttaagatcctggacgccgtcattgctcaggagcctctc
cacagaggcgggggccaggtcatacctacagccagaagagtggtgtactccgccttcctc
atggccactccaaggttgatggagccgtattactttgtggaagttcaggctccggctgat
tgtgtttctgccgtgtacaccgtgctggctcggagaaggggtcacgtcacccaggacgcg
cccattccaggctctcctctctacaccatcaaggccttcatccccgccatcgactcgttt
ggctttgagaccgacctccgcacacacacacagggacaggccttcgctctctctgtgttc
caccactggcagatcgttcccggtgaccctctggataaaagcatcgtgatcaggccgctg
gagccacaacccgccccccacctggccagagagttcatgatcaagacccggaggcgcaag
ggtctgagcgaggacgtcagcatcagcaagttcttcgacgatcctatgttgttggagttg
gccaaacaggacgtggtgctcaactaccccatgtga
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