Takifugu flavidus (sansaifugu): 130515755 Help Entry 130515755         CDS       T09160                                  Symbol traf6 Name (RefSeq) TNF receptor-associated factor 6   KO K03175   TNF receptor-associated factor 6 [EC:2.3.2.27] Organism tfs  Takifugu flavidus (sansaifugu) Pathway tfs04010   MAPK signaling pathway tfs04120   Ubiquitin mediated proteolysis tfs04140   Autophagy - animal tfs04144   Endocytosis tfs04620   Toll-like receptor signaling pathway tfs04621   NOD-like receptor signaling pathway tfs04622   RIG-I-like receptor signaling pathway tfs05132   Salmonella infection tfs05168   Herpes simplex virus 1 infection Brite KEGG Orthology (KO) [BR:tfs00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     130515755 (traf6)  09130 Environmental Information Processing   09132 Signal transduction    04010 MAPK signaling pathway     130515755 (traf6)  09140 Cellular Processes   09141 Transport and catabolism    04144 Endocytosis     130515755 (traf6)    04140 Autophagy - animal     130515755 (traf6)  09150 Organismal Systems   09151 Immune system    04620 Toll-like receptor signaling pathway     130515755 (traf6)    04621 NOD-like receptor signaling pathway     130515755 (traf6)    04622 RIG-I-like receptor signaling pathway     130515755 (traf6)  09160 Human Diseases   09172 Infectious disease: viral    05168 Herpes simplex virus 1 infection     130515755 (traf6)   09171 Infectious disease: bacterial    05132 Salmonella infection     130515755 (traf6)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:tfs04131]     130515755 (traf6)    04121 Ubiquitin system [BR:tfs04121]     130515755 (traf6) Enzymes [BR:tfs01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      130515755 (traf6) Membrane trafficking [BR:tfs04131]  Endocytosis   Clathrin-mediated endocytosis    Ubiquitin E3 ligases     130515755 (traf6) Ubiquitin system [BR:tfs04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    TRAF proteins     130515755 (traf6) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TRAF-mep_MATH MATH_2 zf-TRAF zf-C3HC4_2 zf-C3HC4 zf-RING_2 zf-C3HC4_3 TRAF6_Z2 zf-RING_UBOX zf-C3HC4_4 zf-RING_5 Sina_ZnF CEP104_ZnF RING_XB3-XBAT31 TRAF3_RING U-box DM zf-TRAF_2 HD-ZIP_N DUF7310 Motif Other DBs NCBI-GeneID:  130515755 NCBI-ProteinID:  XP_056872207 LinkDB All DBs Position 2:11426089..11430594 Genome browser AA seq 564 aa AA seqDB search MACFDSSKESLEDSFDGAAGGKLSGCALAMSEKERESLLNPSESPSTYMSGASSSFQDAT HQQGYDVEFDPPLESKYECPICLMALRNAIQTPCGHRFCKICIEKSIRDAGQRCPVDNEM LSKEQLFPDNFAKREILSLTVRCSNPGCTGKMELRHLEDHLAHCQFATVPCPHCQQSVRK TILEEHMTAECRRRPVSCPDCIETFVYEERERHEQQCPFASVMCPYCDMDLVRDQMESHC DTDCPIAPIACTFSLFGCKERMQRHDLARHMQDFTQMHMHYMADFLRGLNLNGTTPKPLG AIGHSISFEDHGASASSCDKGVSSSNCAPCQPNEETQRLREMDRRLVKQDHQLRELIILK ETQAGQLAELGRRVSMLEETVRELESQHCTGIFIWRLKDFSVLLRNQEAGLPVVEHSPAF YTGRPGYKLCLRLHLQSPNAQRCSNFISLFVHTMQGAFDGLLTWPFQGTIRLAILDQGPE GQHHVEVMETKPDLQAFQKPTIIRNPKGFGYVTFLHLQHLNQRAYVKDDILLIRCEVTPR FDNMFHRDGITVQPRGPEASMMRD NT seq 1695 nt NT seq  +upstreamnt  +downstreamnt atggcgtgctttgacagcagtaaggaaagtctggaggacagctttgatggggctgctggt ggaaagctctccggttgtgctttggctatgtcggaaaaagaacgggagtctcttcttaac ccatcagaaagccccagcacatatatgagtggtgcctcatctagttttcaggatgccact caccagcaaggctacgacgtggagtttgatccacccttagaaagcaaatatgagtgccct atctgtctaatggctttaaggaatgctattcaaaccccctgcggtcatcgattctgcaag atctgcattgagaagtccatccgtgatgcgggacaaagatgccctgtggacaatgaaatg ctgtcaaaggagcagctgtttcctgataactttgccaagcgggagattctttcactgact gttcgctgctccaaccctggctgtactgggaaaatggagctcaggcatttagaggatcat ttggcacattgtcagtttgcaactgtgccttgtccacactgccaacagtctgtgagaaag accattttggaggaacatatgactgctgagtgcagaaggagacctgtgtcatgtcctgac tgcatagaaacttttgtctacgaagagagagagcgccatgaacagcagtgtccttttgcc agcgtgatgtgcccgtactgtgacatggatctcgttagagaccagatggaatctcactgt gatactgattgccctatagcccccattgcctgtacttttagcttgtttggatgtaaggaa aggatgcagcgtcacgacctcgctcggcacatgcaggatttcacgcagatgcacatgcac tacatggcggattttctacgcggcctcaacctcaatggcacaacacccaaacccctgggt gcaataggacattctatttccttcgaggaccatggagcatcagcgtcatcctgtgacaaa ggagtgtcgagcagcaactgcgccccctgccagccaaatgaggagacgcagagactgagg gagatggatagacgattggtgaagcaagatcaccagctgcgtgagctcatcattttaaaa gaaacccaggctggtcagctcgcagagcttgggagaagagtgtccatgttggaggagacg gtgagggagctggagtcacagcactgtactgggatctttatctggcgcctcaaagatttt tctgtcctgctgcggaaccaagaagccggtctgcccgtagtggagcacagcccagctttc tacacaggccgtccaggctataagctgtgcctgcgattacacctgcagtctccaaatgcc cagcgctgttccaattttatctccctctttgttcacaccatgcaaggagcctttgatggg ctgctgacctggcccttccagggcaccatccgccttgctatcctcgaccaaggccctgag ggtcagcaccacgtcgaagtgatggagactaaaccagacctgcaggccttccagaagcca accatcattcgtaatcccaaagggtttggctacgtgacatttctgcacctacagcatctg aatcagagagcgtatgtcaaagatgatatcctgctcatccggtgcgaggttacgccacgc tttgataacatgtttcaccgcgatggaataactgtacagccaagaggacccgaggcctct atgatgagggactaa

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