Takifugu flavidus (sansaifugu): 130516152 Help Entry 130516152         CDS       T09160                                  Symbol thbs1b Name (RefSeq) thrombospondin-1   KO K16857   thrombospondin 1 Organism tfs  Takifugu flavidus (sansaifugu) Pathway tfs04115   p53 signaling pathway tfs04145   Phagosome tfs04148   Efferocytosis tfs04350   TGF-beta signaling pathway tfs04510   Focal adhesion tfs04512   ECM-receptor interaction tfs04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:tfs00001]  09130 Environmental Information Processing   09132 Signal transduction    04350 TGF-beta signaling pathway     130516152 (thbs1b)   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     130516152 (thbs1b)  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     130516152 (thbs1b)    04148 Efferocytosis     130516152 (thbs1b)   09143 Cell growth and death    04115 p53 signaling pathway     130516152 (thbs1b)   09144 Cellular community - eukaryotes    04510 Focal adhesion     130516152 (thbs1b)   09142 Cell motility    04820 Cytoskeleton in muscle cells     130516152 (thbs1b)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:tfs04131]     130516152 (thbs1b)   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:tfs00536]     130516152 (thbs1b) Membrane trafficking [BR:tfs04131]  Endocytosis   Phagocytosis    Opsonins     130516152 (thbs1b) Glycosaminoglycan binding proteins [BR:tfs00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    130516152 (thbs1b) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TSP_C TSP_3 TSP_1 TSP1_spondin VWC TSP1_CFP_C EGF_3 TSP1_ADAMTS Laminin_G_3 cEGF EGF TSP1_CCN Motif Other DBs NCBI-GeneID:  130516152 NCBI-ProteinID:  XP_056872966 LinkDB All DBs Position 19:complement(6754483..6764862) Genome browser AA seq 1169 aa AA seqDB search MKLTGIFLLLILWTCECTREAESRDDNSVYDLFELVQVPRKNHGVTLVKGDDPYSPAYKI LNPDLIPAVPDNAFSDLIDSIHAERGFILMLNFKQFKRTRGSLLTVEKKDGSGPVFEVIS NGKANTLDIVFSTENKQQVVSIEDVDLATSHWKNITLFVQEDQAQLYVGCEDVNTAELDA PIHSILTQETPASARLRIGKGAVNDRFMGVLQNVRFVFGTTLNAILRNKGCQNSVTSETM ILENLNGSSAIRTEYTGHKTKDLQMVCGFSCEDLISMFKELKSLGVVVKELSNELRQLTD ENKLIKNRIGIHNGVCIHNGIMHKNRDEWTVDDCTECTCQNSATVCRKISCPVISCTNAT IPDRECCPHCGTPSDSAEDSWSPWSEWTHCSASCGRGIQQRGRSCDRINNNCEGTSVQTR DCYLQECDKRFKQDGSWSHWSPWSSCSVTCGAGVITRIRLCNSPMPQFGGKSCTGEGRQT EKCQKSPCPINGNWGPWSPWDTCTLTCGGGVQIRKRLCNDPEPKHGGKECVGDAKDIQTC NNKSCPIDGCLSNPCFAGVKCTSFHDGSWKCGKCPVGYSGNGVKCKDIDECKEVPDTCFE FNGVHRCENTDPGYNCLPCPPRYSGPQPYGKGVEQAVAKKQVCTPRNPCLDGSHECNKNA RCNYLGHFADPMYRCECKPGYAGNGHICGEDTDLDGWPNSDLICVENATYHCKKDNCPNL PNSGQEDYDKDGIGDACDNDDDNDGIPDDRDNCPFVYNPRQYDYDRDDVGDRCDNCPYNS NPDQTDTDNNGEGDACAVDIDGDGILNEKDNCPYVYNVDQRDTDLDGVGDMCDNCPLEHN PDQVDSDDDRVGDKCDSNQDIDEDGHQNNLDNCPYIPNANQADHDKDGKGDACDHDDDND GIPDEKDNCRLAFNPDQLDSDGDGRGDVCKDDFDQDKVPDIYDVCPENVDISETDFRKFQ MVPLDPKGTSQIDPNWVVRHQGKELVQTVNCDPGIAVGYHEFNSVDFSGTFFINTERDDD YAGFVFGYQSSSRFYVVMWKQITQTYWSNKPTKAQGYSGLSIKVVNSTTGPGEHLRNALW HTGNTAGQVRTLWHDPKNVGWKDFTAYRWHLIHRPRTGLIRVLMYEGKKIMADSGNIYDK TYAGGRLGLFVFSQEMVYFSDLKYECRDA NT seq 3510 nt NT seq  +upstreamnt  +downstreamnt atgaagctgactgggatatttttgcttttaatactttggacctgcgagtgtacgagagag gcagagagccgtgatgacaatagtgtctatgacttgttcgagctcgtccaagtccccagg aagaaccacggggtcacgctggtcaaaggcgatgatccctacagccctgcctacaagatc ctcaacccggacctgatccctgcggtccccgataatgctttcagtgacctcatcgactcc attcacgccgaaagagggtttatcctgatgctcaatttcaagcagttcaagcgaaccagg ggaagccttctcaccgtggagaagaaggatggctccggacccgtgtttgaggtcatctcc aacggtaaagcgaacacgctggacatcgttttctccaccgagaacaagcagcaggtggtt tccatcgaagatgtggacctggcgacgagccactggaagaacatcacgctgttcgtgcag gaagaccaggcgcagctgtatgtgggatgcgaggacgtgaacacagccgagctggacgcg cccattcatagcatcctgacgcaggagaccccggccagtgcgcggctgaggatcggcaaa ggcgcagtgaatgacaggttcatgggcgtcctacaaaatgtgcgctttgtgtttggaacc acactgaatgccatcctccgtaacaaaggatgccaaaactctgttacaagtgaaactatg atcctggagaaccttaatggctcctcagccatcagaacagagtacactggacacaaaact aaagacctgcagatggtctgtggcttttcctgtgaggacctgatcagcatgttcaaggaa ctgaagagtctcggcgtagtcgtgaaggaactgtccaatgagctccgtcagctgacagat gagaacaagctgataaagaatcgcattggcatccacaacggcgtctgcatccataacgga atcatgcacaagaacagagacgagtggacggtagacgactgcactgagtgcacttgtcag aactctgctactgtgtgtcgcaagatctcctgtccggtgatctcctgtactaatgctact atacctgatcgggaatgctgcccgcactgtggaacaccgagcgactctgcagaggacagt tggtcaccatggtctgaatggacccattgttctgcgtcgtgtgggcggggcatccagcag cgcgggcgctcttgcgatcgtatcaataacaactgtgagggcacctcagtgcagacccga gactgctacctacaggagtgtgacaagcgattcaagcaagacggcagctggagtcactgg tcgccttggtcatcttgctctgtcacctgtggtgctggtgtcatcacccgtatccgcctg tgtaactcccccatgccccagtttggaggcaagagctgtactggagagggtcggcaaact gagaagtgtcagaagtctccatgcccaatcaatgggaactgggggccctggtcaccatgg gacacgtgcacactcacctgtgggggtggtgtccaaattcgaaagcgtctctgcaatgac cccgaaccgaaacatggtggaaaagagtgtgttggtgatgccaaagacatccagacttgc aataacaagtcctgccctattgatggatgcctgtctaacccctgctttgctggagtcaag tgcaccagttttcatgatggttcctggaagtgtggaaaatgccctgttggctacagtggt aatggagttaagtgtaaagacattgatgagtgtaaagaggtacctgatacttgcttcgag tttaatggtgtacaccgctgcgagaacacagatcctggttacaactgtctaccatgccct cctcgttactcaggaccccaaccatatggtaaaggtgttgagcaagctgttgcaaagaaa caggtctgcactcctcgtaatccctgcctcgacggaagccacgagtgcaataaaaatgcc cgctgtaactaccttggacactttgccgatcccatgtaccgttgcgaatgcaagcctggc tatgctggcaatggccatatctgtggagaggacacggatctagatggctggcccaattcg gacctgatttgtgtggagaacgccacctaccactgcaagaaggataactgccccaacctt cccaattcgggacaagaagattacgataaagatggtattggagatgcgtgtgacaatgat gatgacaatgacggcattccagatgacagggacaactgcccatttgtgtacaaccccaga cagtatgactatgaccgcgatgatgtgggtgaccgctgtgacaattgcccctacaacagt aacccagaccagacagatacagataataatggagagggagacgcctgtgctgtggacatt gatggagatggcatactgaatgagaaggacaactgtccctatgtgtacaatgttgaccaa agagacacagaccttgatggtgtaggagacatgtgtgacaactgtcctcttgaacataat cccgatcaggtggactcagatgacgaccgtgtaggagacaagtgtgacagcaaccaggac atcgatgaggacggacaccagaacaatctggacaattgcccatacatacctaacgccaac caggctgaccatgacaaggatggaaagggagacgcctgtgaccatgatgatgataatgat ggcatccctgatgaaaaggacaactgcaggctcgccttcaatccagaccagctggactct gatggcgatggtcgtggtgatgtctgcaaggatgattttgaccaagacaaagtgcccgac atctatgatgtgtgccctgaaaatgttgacattagtgagacagacttccgtaaattccag atggttcctttggatcccaagggcacatcgcagattgaccctaactgggttgttcgtcat caaggcaaagagctggttcagacagtcaactgtgaccctggcattgctgttggttaccat gaattcaattcagtggattttagcgggacgttcttcataaacactgagagggatgatgac tatgcaggttttgtgtttggctaccagtccagctccaggttttatgttgtgatgtggaag caaattacacagacatactggtcaaataaacccaccaaggcccaaggttattctggcttg tccatcaaagtggttaactctaccaccggcccaggggagcacctcagaaatgccctctgg cacacaggaaatactgcaggacaggttcgcactctctggcatgaccctaagaatgtagga tggaaggactttactgcctacagatggcatctgatccacagaccgagaactgggctcatt agggttttgatgtatgaaggcaagaaaatcatggctgattccggaaacatatatgacaag acctacgcaggaggcaggctaggtctttttgtcttctcacaagagatggtatacttttca gacctcaagtatgaatgcagagatgcctaa

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