Takifugu flavidus (sansaifugu): 130517346
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Entry
130517346 CDS
T09160
Name
(RefSeq) TNF receptor-associated factor 2-like
KO
K03173
TNF receptor-associated factor 2 [EC:
2.3.2.27
]
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs04010
MAPK signaling pathway
tfs04137
Mitophagy - animal
tfs04141
Protein processing in endoplasmic reticulum
tfs04210
Apoptosis
tfs04217
Necroptosis
tfs04621
NOD-like receptor signaling pathway
tfs04622
RIG-I-like receptor signaling pathway
tfs04920
Adipocytokine signaling pathway
tfs05132
Salmonella infection
tfs05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
130517346
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
130517346
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
130517346
09143 Cell growth and death
04210 Apoptosis
130517346
04217 Necroptosis
130517346
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
130517346
04622 RIG-I-like receptor signaling pathway
130517346
09152 Endocrine system
04920 Adipocytokine signaling pathway
130517346
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
130517346
09171 Infectious disease: bacterial
05132 Salmonella infection
130517346
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tfs03019
]
130517346
04121 Ubiquitin system [BR:
tfs04121
]
130517346
Enzymes [BR:
tfs01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130517346
Messenger RNA biogenesis [BR:
tfs03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
130517346
Ubiquitin system [BR:
tfs04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
130517346
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
TRAF_BIRC3_bd
zf-TRAF
TRAF2_zf
TRAF3_RING
zf-C3HC4
SlyX
zf-C3HC4_2
ATG16
zf-C3HC4_4
zf-RING_6
Nuf2_DHR10-like
Motif
Other DBs
NCBI-GeneID:
130517346
NCBI-ProteinID:
XP_056875129
LinkDB
All DBs
Position
20:3583084..3589941
Genome browser
AA seq
597 aa
AA seq
DB search
MATQEPSPPSSMESNKPGFPKKILGNKLEDKHLCNCCHNILRRPFQAQCGHRFCSYCFNR
TVSNGPQKCSACIKEDIFEDPTSILKQGCAFPDNAVRREVEHLPAACINENCTWKGTIKE
YELNHEGKCEFMIISCPSCKEHIRFNEQERHNERECPERTLNCKYCKEPFHFKNIKAHDE
ICPKYPMICEGCAKKKIPREKYVDHIKFCSKFRTPCRFHVVGCDMSVEKEKIHDHERAYA
YEHLNLLLHYIMGMKVSMEGLQPQGLEVAGQKLVELQQSLRELEARVSQLSTTSSGPPVQ
GAAATSSSSSSSGPPGPPVSAPLPPPPTLAPTLSVSTSFTPLPSSVGAALELQLHSEKTK
VAELGRRCTELEVKANTFENVVCVLNREVERFATTMEASNRQHKLDQDKIEALSNKVRQL
ERTVGLKDLTVAEMEGRLREMSATTFDGVFVWRISDFAKKRQDAIAGRAPAMFSPAFYTS
KYGYKMCLRIYLNGDGTGRGSHLSLFFVVMRGQSDALLKWPFNQKVTLMLLDQSNREHII
DAFRPDVTSSSFQRPVSEMNIASGCPLFCPLSKLDGKNSYIRDDTIFIKAIVDLTGL
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atggccacacaggagccgtcccctccttcgtccatggagagcaacaagcccggcttcccc
aagaagatcctgggcaacaagctggaggacaaacacctgtgcaactgctgccacaacata
ctcagacgaccgttccaggcccaatgtggacatcgcttctgctcctactgcttcaacaga
acagtgagtaatggaccccagaaatgcagtgcctgcattaaggaggatatttttgaggat
cctacatcgattttgaaacaaggatgtgcttttcccgacaacgccgttcgaagggaagtc
gaacaccttccggccgcgtgtatcaacgaaaactgcacctggaaaggaaccattaaagaa
tatgagctcaaccacgaggggaagtgcgagttcatgatcatctcttgtccctcctgcaaa
gaacacatccgcttcaacgagcaagagcggcataacgagcgcgagtgcccggagaggacg
ctcaactgcaaatactgcaaggaacccttccacttcaaaaacatcaaggcgcatgatgag
atctgtcccaagtacccgatgatctgcgaaggctgtgcaaaaaagaagatccccagggaa
aagtatgtggatcatatcaagttctgcagcaaattcagaacgccgtgtcgatttcacgtc
gtggggtgtgacatgtctgtggaaaaggaaaaaattcacgaccacgagcgcgcctacgcg
tacgagcacctcaacctgttgctgcattacatcatgggcatgaaagtgagcatggagggc
ctgcagccccaggggctggaagtagctgggcaaaaactggtagagctccagcagtccctc
cgggagcttgaggccagagtctcccagcttagcaccacctcctctgggcctcccgtgcag
ggagccgccgctacctcctcttcatcatccagctccggccctcccggtccgccggtctcg
gctccactccctcccccacccacactagctcccaccctgtctgtgtccacctccttcacg
ccccttcccagctcggtgggcgcggcgctggagctgcagctccacagcgagaagaccaag
gtggccgagctagggcgccggtgcacagagctggaggtcaaagccaacacctttgagaac
gtggtgtgtgtgctgaacagagaggtggagaggttcgccaccaccatggaagccagcaac
cgtcagcacaaactggaccaggacaagatcgaggctctgagcaacaaggttcgacagctg
gagaggacggtggggctgaaggacctcaccgtggctgagatggagggccggctgagggaa
atgtctgccacaacctttgacggcgtctttgtttggcggatctctgattttgccaagaag
aggcaagacgccatcgcgggtcgcgctcctgccatgttttcaccagccttctacaccagt
aagtacggctacaagatgtgcttgcggatctacctgaatggagacgggacggggcgcggc
agccacttgtccctgttctttgtggtcatgaggggacagagtgacgctctgctcaaatgg
ccgttcaaccagaaggtgaccctcatgctgttggaccagagcaacagggagcacatcatc
gacgcctttcgccccgacgtcacttcctcctcctttcagagacccgtgagcgagatgaac
atcgccagcggctgcccgctcttctgcccgctctctaagctggatgggaagaactcctac
atccgcgacgacaccattttcatcaaggccatcgtggacctcaccggcctctag
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