Takifugu flavidus (sansaifugu): 130517733
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Entry
130517733 CDS
T09160
Symbol
traf2b
Name
(RefSeq) TNF receptor-associated factor 2 isoform X1
KO
K03173
TNF receptor-associated factor 2 [EC:
2.3.2.27
]
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs04010
MAPK signaling pathway
tfs04137
Mitophagy - animal
tfs04141
Protein processing in endoplasmic reticulum
tfs04210
Apoptosis
tfs04217
Necroptosis
tfs04621
NOD-like receptor signaling pathway
tfs04622
RIG-I-like receptor signaling pathway
tfs04920
Adipocytokine signaling pathway
tfs05132
Salmonella infection
tfs05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
130517733 (traf2b)
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
130517733 (traf2b)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
130517733 (traf2b)
09143 Cell growth and death
04210 Apoptosis
130517733 (traf2b)
04217 Necroptosis
130517733 (traf2b)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
130517733 (traf2b)
04622 RIG-I-like receptor signaling pathway
130517733 (traf2b)
09152 Endocrine system
04920 Adipocytokine signaling pathway
130517733 (traf2b)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
130517733 (traf2b)
09171 Infectious disease: bacterial
05132 Salmonella infection
130517733 (traf2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tfs03019
]
130517733 (traf2b)
04121 Ubiquitin system [BR:
tfs04121
]
130517733 (traf2b)
Enzymes [BR:
tfs01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130517733 (traf2b)
Messenger RNA biogenesis [BR:
tfs03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
130517733 (traf2b)
Ubiquitin system [BR:
tfs04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
130517733 (traf2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
TRAF_BIRC3_bd
zf-TRAF
TRAF2_zf
TRAFD1-XIAF1_ZnF
Paramyxo_NS_C
zf-ACC
Motif
Other DBs
NCBI-GeneID:
130517733
NCBI-ProteinID:
XP_056875788
LinkDB
All DBs
Position
20:1610630..1622996
Genome browser
AA seq
557 aa
AA seq
DB search
MSAVSPGAEEACPGSVWSPLLHPLLQGAHQVDWRSSDHPQPRAMQTSSLSDAYTLMKHAS
AHPVGSFLLNSEKISASNVQLLYSNSSFHDWTLRLNSGPKPCEACRQEEIYEEPISVLNS
NEVFPDNAAGREIASLPARCLNQGCSWTGSIKQYEAQHEGRCELEQIKCDACQASVLRAE
IDRHNERECEARTLNCKYCKLTFHFKDIKAHDDICLKFPLPCKDCGKKKIPREKFNEHIR
SCAKSKSACPFSEVGCKSVVENGKLREHEHSSTVEHLHLLLPMVLSLTRTRAEASESGEW
QEDSGLGLYRAPEEGVNVGAGAAASVHPVDLEKKVTALENIICVLNREVERSALKVEAFA
HQHCLDQEKIENLVSKVGQLERAIAMRDLQLSETEQMVRELQSCTYDGIFVWKISEFSRR
RQEAVAVRMPTMFSPAFYSSKYGYKMCLRLYLNGDGTGRGTHLSLFFVVMRGKCDALLKW
PFSQKVTLMLLDQNNREHIIDAFRPDVTSSSFQRPISEMNIASGCPLFCPLAKLAGKSPY
LKDDTIFIKAIVDLTGL
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcagtgtctccaggtgctgaggaagcctgtccaggctcagtgtggtcaccgctt
ctgcatccattgcttcaaggagctcaccaggtagactggaggtcctcggaccacccacag
cctcgtgcaatgcaaacctcttccctgtccgatgcttatacactaatgaaacacgcttcc
gcacacccagtgggctcatttctgctcaactctgagaaaatctcggcctccaacgttcag
ttgctttattccaactcatccttccatgactggactctaagattgaattctgggccaaaa
ccatgtgaagcctgccgccaagaggagatatacgaagagcccatttccgttctaaatagt
aacgaggtatttccagacaacgccgctggacgagagatagcaagcctccctgccaggtgc
ttgaaccagggctgcagttggaccggctctataaagcagtatgaggctcagcacgaaggc
cgctgcgaattggagcagattaagtgcgacgcctgccaagcctccgtcctccgtgcggag
atcgacagacataacgagagagaatgtgaagcccggacgctcaactgcaaatactgcaaa
ctcaccttccattttaaagacatcaaggcccacgatgacatctgtttgaagttcccctta
ccctgcaaggactgtgggaaaaagaagatccccagagaaaagttcaacgagcacatccgg
tcctgcgccaagtccaaaagtgcctgtcccttcagcgaagtgggctgcaaatctgtggtg
gagaacggaaagctcagggagcacgagcacagcagcaccgtggaacacctgcacctgctg
ctgcccatggtgctgtccttgacccggacgcgggcggaggcttccgaatccggggagtgg
caggaggattctggtctgggcctgtaccgggctcctgaggagggagttaatgtgggcgcc
ggagctgcagcctccgtgcaccctgtggacttagaaaaaaaggtgacggctctagaaaac
atcatctgcgtcctgaaccgagaggtggagcgcagcgcgttgaaagtggaggctttcgca
caccagcattgtttagaccaggaaaagatcgagaacctggtgagcaaagtgggtcagctg
gaacgggcgatcgccatgagagacctgcagctgtctgagaccgaacagatggtgcgagag
ctccagtcctgcacctacgatgggatattcgtctggaaaatctccgaattctcacgtcgc
aggcaggaagccgtggccgtccgcatgcctacgatgttctcgccagcattttactccagt
aaatatggctacaaaatgtgcttgaggctgtacttgaacggagatgggacggggcgaggg
acccacctctcactgttctttgtggtcatgaggggcaagtgtgacgcgctgctcaaatgg
ccgttcagtcagaaggtgaccctgatgctcttggaccagaacaacagggaacacatcatc
gacgcctttcgccctgatgtgacctccagctcctttcagcggcccatcagtgagatgaac
atcgccagcggctgcccgctcttctgcccgctggctaaactggccggcaagagcccgtat
ctgaaggacgataccattttcatcaaagctatcgtagacctgacaggcttatag
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