Takifugu flavidus (sansaifugu): 130518961
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Entry
130518961 CDS
T09160
Symbol
cacna2d1a
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-1a isoform X1
KO
K04858
voltage-dependent calcium channel alpha-2/delta-1
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs04010
MAPK signaling pathway
tfs04260
Cardiac muscle contraction
tfs04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
130518961 (cacna2d1a)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
130518961 (cacna2d1a)
04261 Adrenergic signaling in cardiomyocytes
130518961 (cacna2d1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tfs04040
]
130518961 (cacna2d1a)
Ion channels [BR:
tfs04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
130518961 (cacna2d1a)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
VWA
VWA_2
dCache_1
MCP-like_PDC_1
Cache_3-Cache_2
DUF2201
Motif
Other DBs
NCBI-GeneID:
130518961
NCBI-ProteinID:
XP_056877918
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Position
22:5033265..5076591
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AA seq
1083 aa
AA seq
DB search
MDYPAFLLLLLSSVSSVSVGQFPTTQTIKDWAEQMQKELITLIDEASGMQHLVQMYHKHS
PHFTVETNDAQQLVAAAAGNIEKLLAKRSEALKRLAAEAEKFQMEHDWREDSEAEKIVYY
NAKEDFNQTDRKKNRYVPDDFEIDDDFKRLVSYNTTAVHIPTDIYEGSTIILNELNWTEA
LEEVFRKNKEDDPSLLWQVFGSATGLARYYPASPWMDISNSANKIDLYDVRRRPWYIQGA
ASPKDMLILVDASGSVSGLTLKLIRTSVSEMLETLSDDDYVNVVYFNDKAMYASCFENLV
QANVRNKRMLKKAVQNITAKGTTNYKGGFELAFEQLAQMNVSRANCNKIIMLFTDGGEEK
AEEIFKRYNPNQAVRIFTFSVGKHNYDKGPIQWMACNNKGYYYEIPSIGAIRINTQEYLD
VLGRPMVKDHRKAKKVQWTNVYLDALQLGLVITGTLPVFNKTNTGTKKAPKYQNQLILGV
MAVDVSLEDIKRLTPHFTFGPNGYYFAMDPNGYVLLHPNLQPMTAKFNEPVTLDFLDAEL
ENAVKVEIRRKMIDGLTGNYSISTLVKSQDERYIDLGQRTYTFAPVKGTDYSLALVLPQY
SKNYIKAKIGDTITQAKCKCLSESLLADKFDEYGYTFIAPRMYCKDLKPPEKNQNNTEFL
IEFNKYIDNETPNHPSCNVELVNRMLLDAGITSELIKIWKKNEPQNVVMARFVATDGGIT
RVYPKSAGLSWEENAETYESSFYKRSLDNNLYIFTPTPYSRENSSEESVLVSRVVNVNIG
DSILKPAVVGLKLDISAWMVSFINTTQRMNCIDEICGCQRNHPYVDCVLLDDGGFLVMSN
KDEDLSKIGRFFGTIDPILMRNLVNESLFTSKKTFDYQSLCDPQKRSKAAAGLRSVYVPT
VADILNVGWWATAATWSILQQLLVSITFPNFLDAAEMEDNVPDAMRKAVCITEQTQYYFE
NNHPSFRGNIDCENCTRMYHAEKLPKTNLVFIISDAKLTCSSCDSKPLIQDEQQSDGPDP
CEVARSPRYRKGPDICFDSTENDEAMCRQSAGSSLAASLLMLLLPLFMCCLGRTTLTVAE
RPA
NT seq
3252 nt
NT seq
+upstream
nt +downstream
nt
atggattatcccgcgttcctacttttgctgctgtcgagcgtctcctcggtgtcggtcgga
caattcccgaccacgcagacaataaaggactgggcggagcagatgcagaaagagctgatc
acgctaatcgacgaggccagcggcatgcagcacctggtacagatgtatcataaacacagt
cctcacttcaccgtggagaccaacgacgcgcagcagctggtggcagcggcggcggggaac
atcgagaagctgctggcgaaacgctccgaagccctgaagaggctggcagcagaggcggaa
aagtttcaaatggagcacgattggagggaggacagcgaggctgagaagatagtttactac
aatgccaaagaggactttaatcagacagacaggaagaagaaccgctacgtgcccgatgac
ttcgagatcgacgacgacttcaagcgactcgtctcctacaacaccaccgccgtccacatc
ccgacggacatatacgaaggctccaccatcatcttgaacgagttaaactggacggaggcc
ttggaggaggttttccgtaaaaacaaagaggacgatccgtcgctcctctggcaggtgttt
ggatccgccaccggattggcccggtactacccagcttctccctggatggacatcagcaac
tctgccaataagatcgacctctacgacgtgcgcagacgaccgtggtacattcagggggca
gcgtcacccaaggacatgctaatcctggtggacgcgagtggcagcgtctcaggcctcacc
ctcaaactcatccggacctccgtcagcgagatgctggagaccctctctgacgacgactac
gtcaacgtggtctatttcaacgacaaggccatgtacgcctcctgtttcgagaatctggtg
caggccaacgtgcgcaacaagaggatgctgaagaaagcggtgcagaacatcaccgccaag
ggcaccaccaactacaaaggcggcttcgagctggccttcgagcagctcgcgcagatgaat
gtatcaagggccaactgtaataagatcatcatgctcttcaccgacggcggagaggagaaa
gcagaggagatcttcaagagatacaaccccaatcaggcggtgcggatcttcaccttctcc
gtgggcaagcacaactacgacaaagggccgatccagtggatggcctgcaacaacaaaggg
tattactacgagatcccttccattggcgccatcaggatcaacacccaggagtacctggac
gttttgggccgccccatggtgaaggaccacaggaaggccaagaaggttcagtggaccaac
gtctacctggacgcgctgcaactgggcctggtgatcactggaacgctgcccgtcttcaac
aagacaaacacaggcaccaagaaagctcccaagtaccagaaccagctcatcctgggggtt
atggccgtagacgtgtccctggaagacatcaagaggctgacgccgcacttcacctttgga
ccaaacggctactacttcgccatggaccccaacggatacgtgctgctgcaccccaacctc
cagccgatgaccgctaaatttaacgaacccgtaacgctcgacttcctggacgcagagctg
gagaacgccgtcaaagttgagataaggagaaagatgatcgacgggttgacggggaattac
tccatatccaccctcgtgaaatcgcaggatgagcgctacatcgatttaggccagaggacg
tacacgtttgcaccggtgaaggggaccgattacagcctggccctcgtccttccccagtac
agtaagaattacatcaaggccaaaatcggcgacaccatcacccaggcgaaatgtaagtgc
ctttctgagagcctgttggcagataagtttgatgaatacggctatacgttcatcgcgccg
aggatgtactgtaaggacctgaagccgcccgaaaagaaccagaacaacacggagttcctt
atagaattcaacaaatacatcgataatgagacgccaaaccacccgtcatgtaatgtggaa
ctggtgaaccggatgctcctggacgctggcatcacctcagaactgatcaagatctggaaa
aagaatgagccccaaaatgtcgtcatggccagattcgttgccaccgacggagggatcact
cgggtctaccccaaaagcgccggactgtcctgggaggaaaatgccgagacctacgagtca
agtttctacaagcgaagcttggacaacaacctgtacatcttcactccaactccgtactcc
agggagaactcgagcgaggagtcggttctggtgagccgagtggttaacgtcaacattggt
gacagcatacttaaaccggccgtggtcgggctgaagctggatatcagcgcctggatggtg
agcttcatcaacaccactcagaggatgaactgcattgatgagatctgtggatgtcagaga
aaccacccgtacgtagactgtgtcctgctggatgatgggggcttcctggtgatgtctaac
aaagatgaagacctcagtaagattggccgcttctttggcaccatcgaccccatcctgatg
agaaacctggtcaatgagtcgctcttcacctccaagaagacgttcgactatcagtccctc
tgcgacccccagaagaggagcaaggcagcagcaggactgcgatccgtctacgtgcccacc
gtcgcagacattttaaacgtaggctggtgggccaccgcggcgacctggtcaatattgcaa
cagttgctggtcagcatcacgttccctaatttcctggacgcagctgagatggaagacaac
gtgccagacgccatgcgaaaagcagtctgcatcacggaacaaacccagtactactttgag
aacaatcatccgtccttcaggggcaacatcgactgtgagaactgcaccaggatgtaccac
gccgaaaagctgcccaagacgaacctggtcttcatcatctctgatgcgaaactcacctgt
tcgtcctgcgactccaagccgctgatacaggacgagcagcagtctgatggtccggatccc
tgcgaggtggctcgcagccctcgctacaggaagggtcctgacatctgctttgacagcacg
gagaacgatgaggccatgtgccggcagagcgcaggctcctcattggctgcctctctgctc
atgttactgctgccactgttcatgtgctgtctcgggaggacgaccctgactgtggcggag
cgtccggcctga
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