Takifugu flavidus (sansaifugu): 130519233
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Entry
130519233 CDS
T09160
Symbol
irf5
Name
(RefSeq) interferon regulatory factor 5 isoform X1
KO
K09446
interferon regulatory factor 5
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
130519233 (irf5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tfs03000
]
130519233 (irf5)
Transcription factors [BR:
tfs03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
130519233 (irf5)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
130519233
NCBI-ProteinID:
XP_056878444
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All DBs
Position
22:complement(231986..235275)
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AA seq
471 aa
AA seq
DB search
MSFQPRRIRLKPWLLAQVNSGRYPGLQWVSQDHRLFQIPWKHATRHTPASEEEVTIFKAW
ALETGKYQEGVDEPDPAKWKANLRCALNKSREFQLKYDGTKETPVHPYKIYEVCEQPGNA
DVGEEEDEEMPNLMHLTIGSASNSAYPAVPDVSRISLGTDGSFGSLRVTSDLPSQMETDS
SFVPSIEPPNGLQDFSVLPAPASSALPDPLELGTMGDIQNLVHPQNQQTCKYDLLSSIPL
TDLDLKFQYRGRMMGSQNVSNPQGCRLYYGHMEPTPEQVDLFGPVTLQQVQFPGTSDIQN
HKQRQYTETVLGALERGLILEIWEQDIYAMRLCQSKVFWSGPGVPEQGPPNPMEREERVK
VFSLNHFLEGLIRFQKGDAPNPPPFEIYFCFGEDWPDRRPKEKKLIVVQVVPVVARILTE
MFSGELNWSTDSVHLRISNPDIKDQTVEQFKELQRLMQSQNITGPWTLNIP
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgagcttccagccacggaggatccgcctgaaaccctggttactggctcaggtgaacagt
ggccggtatcctgggctgcagtgggtcagtcaggaccaccgactcttccagatcccctgg
aaacacgcgacgcggcacacgccagcatcagaggaggaggtcaccatcttcaaggcgtgg
gctctggagacgggcaagtaccaggaaggtgtggatgaacccgacccggccaagtggaag
gcgaacctccgctgtgctctgaacaagagccgagagtttcagctgaaatacgacggaacc
aaagagacgccggtccacccgtacaagatctacgaggtctgcgagcagcccgggaacgcg
gatgttggtgaggaggaagacgaagagatgccaaatctgatgcacctcacgatcggctcc
gcctctaacagcgcctacccagctgtgcccgatgtcagtcgcatcagcctgggcaccgat
ggctcctttggatccctcagagtgacctctgacctcccgtcccagatggagaccgacagc
agctttgttccttccatagaaccccccaacggcctccaggacttcagtgttctgccggct
cctgcctcctctgcccttcctgacccattagaattgggcaccatgggggacatccagaac
ctggttcaccctcagaaccagcaaacctgcaaatatgacctgctgagcagcatcccactt
acagatctagacctgaagttccagtaccggggcaggatgatgggctctcagaatgtcagt
aaccctcagggttgcagactctactacggacacatggaacccaccccggagcaggtggac
ctgtttggacccgtcaccctgcagcaggtgcagtttcctggaacatctgacattcagaac
cacaagcagcggcagtacacagagaccgtgctgggggcgctggagcgcggtctgatcctg
gagatctgggagcaggacatctacgccatgcgcctctgccagtctaaggtgttctggtct
ggacccggcgttccagaacagggcccacccaatcccatggagcgcgaggagcgggtcaaa
gtcttcagcctcaaccactttctagaaggactcatcaggttccagaagggcgacgctcca
aacccgccgcccttcgagatctacttctgcttcggggaggactggcccgacaggaggccc
aaagagaagaagctcatcgtggtccaggtggttccggtggtggctcggatcctgaccgag
atgttctcaggagaactcaactggtccacagacagcgtccacctgcggatctcaaacccc
gacatcaaggaccagacggtggagcagttcaaggagctgcagcggctcatgcagagccag
aacatcacgggaccctggaccctgaacatcccctga
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