Takifugu flavidus (sansaifugu): 130519764
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Entry
130519764 CDS
T09160
Symbol
scn4ab
Name
(RefSeq) sodium channel protein type 4 subunit alpha B isoform X1
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
tfs
Takifugu flavidus (sansaifugu)
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tfs04040
]
130519764 (scn4ab)
Ion channels [BR:
tfs04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
130519764 (scn4ab)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
IQ
Motif
Other DBs
NCBI-GeneID:
130519764
NCBI-ProteinID:
XP_056879307
LinkDB
All DBs
Position
Unknown
AA seq
1719 aa
AA seq
DB search
MRTLLPPVGSEVFRRFTQSSLNEIQQKQQIREEERKRTNAQVSEELPEPASDLEAGKPLP
FIYGEPPHELLNVPLEDIDPFYQSQKTFIVLSKGNIIYRFNAESSLYLLSPFNALRIVAI
KILIHSLFSLFIMATILTNCAFMTLSDPPAWSKTMEYVFTFIYTFEATIKILSRGFCVGK
FTFLKDPWNWLDFMVISMAYLTELVDLGNVSVLRTFRVLRALKTITVIPGLKTIVGALIQ
SVRKLADAMVLTVFCLSVFALIGLQLFMGNLRQKCVLIPQWLYGNLTFDINSTNGYYGND
THDNGTKSKHLEFEFERHINNPDNYYYLTGQGDPLLCGNSSDAGVCPESYVCLKVGANPN
YGYTSYDSFGWAFLALFRLMTQDFWENLFQLTLRTAGKTYMIFFVVVIFLGSFYLINLIL
AVVAMAYAEQNEATLAEAKEKEEEYIHILEALKKREEEQAARKEPHSTVEDFEDDHRLCP
PCWYAFANIFLKWDCCGCWRHLKECLYAIVMDPFVDLGITICIILNTVFMAMEHYPMSAD
FEELLSVGNLVFTGIFTGEMVLKILAMDPYFYFQVGWNIFDSIIVTISLVELGLANVQGL
SVLRSFRLMRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKN
YKDCVCRISEDCVLPRWHMNDFFHAFLIIFRVLCGEWIESMWDCMEVSGQTMCLIVFMMV
LVIGNLVVLNLFLALLLSSFSGDNLTTQDDEGENNLQIAINRINRAMSWTKTYILLYVYT
LTESNLNQHFAVSDDEEQRRVKDILALTSVSSDKLVSHHCGNDFFRVPIAEAESDSDDSD
YDEDKDSQCDESSVCSSVQKPEVQEEEMDENCVAKTPTDCWTKKCYSRCPFLDIDTSQGR
GKIWCNIRRTCFSIVENNYFESFIVFMILLSSGALAFEDIYLEKHQLIKSILEYADKVFT
YVFVMEMVLKWFAYGFKSYFSNAWCWLDFLIVDVSLVSLTANILGYSELGAIKSLRTLRA
LRPLRALSRFEGMRVVVNALVGAVPSIFNVLLVCLIFWLIFSIMGVNLFAGKFSYCFNET
SQEIIDTKVVDNKTECIALIEANFTEVRWKNVKVNYDNVGIGYLSLLQVATFKGWTDIMY
AAVDSRDVESQPIYEVNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKAKLGGQDIF
MTEEQKKYYNAMKKLGSKKPQKPVPRPENPFQGLVFDLVTKQIFDVFIMVLICLNMVTMM
VETDEQSDKKEEVLYWINVVFILIFTTECTLKIIALRRHYFSIGWNIFDFVVVILSILGL
LLADIIEKYFVSPTLFRVIRLARIGRVLRLIRGAKGIRTLLFALMMSLPALFNIGLLLFL
IMFIFSIFGMSNFAYVKKEALIDDMFNFETFGNSMICLFMITTSAGWDGLLSPIMNTPPD
CDPNVENPGTTVRGNCGSPAIGIAFFSTYIIMSFLVVVNMYIAIILENFNVATEESSDPL
CEDDFEMFYETWEKFDPDASQFIQYSKLSDFCDTLKEPLRIPQPNTIKLISMDLPLVPGD
RIHCMDILLALTAEVLGDSDEMDTLKATMEEKFMANNPSKVSYEPISSTLLRKEEEVAAT
VIQRAYRKYLLLRTVRLASFMYREKTEGRGKEKAPETTGLLCKQFSQLYGFNKETDEPLQ
SKANRLGQVELQSEVLLHAVPPLRSSEFLQERDQRETSV
NT seq
5160 nt
NT seq
+upstream
nt +downstream
nt
atgagaactctactgccccctgttggttcagaggtcttcaggcgcttcacacagtcctca
cttaatgaaatccaacaaaagcaacaaatcagagaggaagaaaggaaaagaacaaatgca
caggtatcagaggaactcccagagccagccagtgacctggaagctgggaagccactccca
ttcatttatggtgaaccaccccatgaacttctcaatgtacctctagaggacatagatccc
ttctaccaatcacagaagacattcatcgtgttaagtaaaggaaacatcatctacagattt
aatgctgagtcatctctgtacctgcttagtccatttaacgctttgcgaatagttgccatc
aagattcttattcattctttattcagtttgttcatcatggcaacaattctgaccaactgt
gcgttcatgacactgagtgatcctccggcatggagcaaaactatggagtatgtgtttaca
ttcatctacacatttgaagccaccataaaaattctgtcaaggggcttttgtgtaggaaaa
ttcacctttctgaaagacccctggaactggctggacttcatggtcataagtatggcatat
ttaactgagttggtagatttaggaaacgtttctgtcttgaggactttcagggttcttcga
gctttgaagaccattacagtcattccaggtctgaagacaatcgtcggagctctcatccaa
tcagtgaggaagctggctgatgccatggtcctgactgtgttttgtctcagtgtctttgcc
ttgattggtctacagctcttcatgggaaacctacggcaaaaatgtgttctaatcccacaa
tggctgtatggtaacctcacttttgacatcaattctaccaatggttactatggtaatgat
acccatgacaatggtacaaaaagcaaacacttggagtttgagtttgaaaggcacatcaac
aacccagataactattactatctgactggtcaaggagatcctctgctgtgtggaaacagt
tctgatgctggggtctgcccagagagttacgtttgtctgaaagttggcgcaaatccaaac
tatggctacacgagttacgactcctttggttgggcgttcttggctcttttccggctgatg
actcaggacttctgggaaaatcttttccagctgacactgcgaacagctgggaaaacctac
atgatcttctttgtagtggtcatctttcttggttcattttacctgattaacctgatcctg
gctgtggttgccatggcatatgctgagcagaatgaggccactttggctgaggccaaagaa
aaagaggaagaatacattcacattctggaagcactgaagaagagggaggaagagcaggca
gccaggaaagaaccacacagtactgtggaagattttgaggatgaccacagactatgtcct
ccatgttggtatgcctttgcaaacatcttcctaaagtgggattgttgtggctgttggcga
catttgaaagagtgtctctatgccattgtcatggacccatttgtagatctaggcatcacc
atctgtatcatccttaatactgtcttcatggccatggagcattatccaatgtctgcagac
tttgaggagcttctgagtgttggaaatttggtcttcacaggtatcttcacaggtgagatg
gttcttaaaattctggcaatggacccatacttctacttccaggtgggttggaacattttt
gacagtatcatcgttaccataagtctggtggagctgggactggcgaatgttcagggcttg
tctgtgctgcgctccttcagattgatgcgcgtgtttaagcttgccaaatcatggccaacc
ctcaacatgttaattaagatcattggaaactctgtcggtgctttggggaacctgactctg
gtcttagcaatcatcgtcttcatctttgctgtggttgggatgcaactctttggaaagaac
tacaaagactgcgtttgtcgtatttcagaagactgtgtgctccctcgctggcacatgaat
gactttttccatgcattcctcatcatctttagagtcctgtgtggagagtggattgagtcc
atgtgggactgcatggaagtgtcaggtcagactatgtgtctgattgtcttcatgatggtc
cttgtcattggaaacctagtggtcctgaacctgttcctggccttattgctgagctcattc
agtggtgataatcttactactcaagatgatgaaggagaaaataatttgcaaattgctata
aaccggatcaacagagctatgtcctggacaaagacttatattctgctatacgtctacact
ttaactgagagtaatcttaatcaacattttgctgtgtctgatgatgaagaacaaagaaga
gtaaaagacattttagcattgacctctgtgtcctctgacaagttggtgtcgcatcactgt
ggcaatgacttcttcagagtccccattgcagaggctgagtctgactctgatgattctgat
tatgatgaggacaaggactctcaatgtgatgagtcatcagtttgcagctctgtgcagaaa
cccgaagttcaggaggaggaaatggatgaaaactgtgttgcaaaaacacctacggactgc
tggactaaaaagtgttatagtcgttgtccattcttggacatagacacatcccagggcaga
ggaaagatctggtgcaacatcagaaggacctgcttttccattgtggaaaacaactatttt
gagtccttcatagtcttcatgatcttgctgagcagcggtgctctggcttttgaggatatc
tacctggagaagcatcaactcataaagtctatccttgagtatgcagacaaggtgttcact
tacgtattcgtgatggagatggttctcaagtggtttgcctatggattcaagtcttacttc
agcaatgcctggtgctggcttgatttcctcattgtagatgtatctttggtttctctgaca
gcgaacatcctgggttactctgagctgggtgccatcaagtctctcaggactctaagggct
ctgaggccccttagggccctatctcgctttgagggaatgagggtggtggtcaatgccttg
gttggagcagtaccctccatttttaatgttttattggtgtgtctaatcttttggctgatc
ttcagcatcatgggagtgaatctgtttgcgggaaagttttcttactgttttaatgagact
tctcaagaaataattgatacaaaagttgttgacaacaagacggaatgcattgctctgatc
gaggcaaactttactgaggtccgctggaagaatgtgaaggtcaactatgacaatgttggg
attgggtacctgtctctgctgcaagtggccacatttaaaggctggacggacataatgtat
gcagcggtggattccagagatgtggaatcacagccaatatatgaagttaatctctacatg
tacctttactttgtcatcttcatcatctttggctccttctttaccttgaacctcttcatt
ggagttatcatcgacaacttcaatcaacaaaaagcaaagttaggaggacaagacattttt
atgacagaagaacaaaaaaaatattacaatgccatgaagaaattgggctctaagaaacct
cagaaaccagttccccgacctgagaatccatttcaaggtctggtgtttgacctggttacc
aaacaaatttttgatgttttcatcatggtgttgatctgcctcaacatggtgaccatgatg
gtagagacagatgagcagagtgacaagaaagaagaggtcctgtactggatcaatgtggtc
ttcatcctcatctttaccacggagtgtacactcaagataattgcactccgtcgacactat
ttctccattggctggaacatcttcgactttgtggttgtcatcctctctattctaggcctc
ctccttgcagacatcatagagaaatactttgtttctcccacactgtttcgagtgattcga
ttagctcgtattggccgagtgcttcgtctcatccgtggagccaaagggattcggacgctg
ctatttgccctcatgatgtcactccctgccctttttaacattggtctccttctcttcctc
atcatgttcatcttctctatctttggcatgtctaactttgcatatgtgaagaaggaggcc
ctgattgatgatatgtttaactttgaaacgtttgggaacagcatgatctgtttgtttatg
atcaccacctcagctggatgggatggtctgctgagtcccatcatgaacacccccccagat
tgtgaccccaacgtagaaaacccaggaacaacagttagagggaactgtggcagcccagct
attggcattgccttcttctccacttacatcatcatgtcattcctggtcgtggtcaacatg
tacatagctatcatcttggaaaatttcaatgtggctacagaggagagcagtgatccactg
tgtgaagatgattttgagatgttttatgaaacttgggaaaagtttgaccctgatgcttca
cagtttatacagtacagtaaactttcagatttctgcgacacactaaaggaacctctgaga
attcctcagccaaataccatcaaattaattagcatggatctccctctcgtacctggagat
aggatccactgtatggacattttgcttgcactaacggcagaggttttgggtgattcagat
gagatggataccctcaaagccaccatggaggagaagtttatggccaacaatccttccaag
gtttcatatgaaccaatcagcagcaccctgctcaggaaagaagaagaagtggcagcaaca
gttatccaaagagcatataggaaatatctcctgctgcgaacagtcagactggcgtccttc
atgtaccgagagaagacagaaggccgggggaaggaaaaagcgcctgaaaccacgggactt
ctgtgtaaacaattcagtcagttgtatggatttaacaaagagactgatgagccactgcaa
agcaaagctaataggctgggccaggtggagcttcagagcgaggtgctcctccacgctgtt
cctccactcagatcctctgagttcctccaggaaagagaccaaagggagacttcagtctga
DBGET
integrated database retrieval system
