Takifugu flavidus (sansaifugu): 130522992
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Entry
130522992 CDS
T09160
Name
(RefSeq) LOW QUALITY PROTEIN: zinc finger protein GLI2-like
KO
K16798
zinc finger protein GLI2
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
130522992
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tfs03000
]
130522992
Transcription factors [BR:
tfs03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
130522992
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_15
zf-C2H2
zf-H2C2_2
FOXP-CC
Zap1_zf1
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
130522992
NCBI-ProteinID:
XP_056883905
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Position
3:11156794..11192300
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AA seq
1122 aa
AA seq
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METPAAQAAEKKDKMEGNVFSALGKKPSETRAPHHLFPTFHTPIPIDMRHHEGRYHYEPH
ALHAMHGPAALAGSPVISDISLVRLSPAAVPAGDSPFSPPHPYVSPHMEHYLRSVHGSPT
LSMISAARGLSPAELAHEHLKERGLFGLPPPPPGTSPAEFYHLMASHRSPYGDLLMQGXG
APPGSHLSDYITPIDVSRFSSPRLTPRLSRKRALSISPLSDASIDLQTMIRTSPSSLVAY
INNSRSSSAASSSYGHLSVGGLSPSFPFPHPMAYQQLLSQQRGLSAFGHTSPLIQPPPTF
SAHQLGLGLSSLPESNLPAKHLSGDSAVSSTVDPLVTKRSKVKTEAEGLRLSSPCSPNHH
DGSLDLKDEGDRDDCKQELEAVYETNCHWEGCSKEYDTQEQLVHHINNDHIHGEKKEFVC
RWEECSREQKPFKAQYMLVVHMRRHTGEKPHKCTFEGCSKAYSRLENLKTHLRSHTGEKP
YVCEHEGCNKAFSNASDRAKHQNRTHSNEKPYVCKIPGCTKRYTDPSSLRKHVKTVHGPE
AHVTKKQRGDLLPRPPGPRDNSENDEGNRERLQRDNNMLESSSPRGAEDYLHIKSIKMEN
SVMYQPSPGGQSSCSSEPSPLGSAPNNDSGVEMAANSGGSLGDLSTLDDLHFVEALSCVG
SAGGVTVAGPHFLKQLSTCQRLEHLKRETLKTVRDSCHWTGEPTAPVLGTKLPPIPATGS
LLEKTHVPVPLPGSCLVDLNSDKTLLGNLSERRDSTSSTLSSVYTLSRRSSGISPCYSSR
RSSQASQFGTNRPNNLSSADSYDPISADISRRSSQVSQFGESSRGTERYGGPPSPLSLTP
AQHYHLKAKYAAATGAAPPTPLPHMDQTCPRPRTPLYDCTQEFAARSLMPHEVSASMSRR
ASDPVKRLLVTPLNQPQLQRYNSLGTLSRTVEPRPPSLADRQHLPQLRHTHPNSGMFRYS
LQPLSISEHAAVGVTNGVTKENPAQFQRNSEAANRVPTNQDQFPTATKFQQPLQQRRMAI
RNANLPLTTSNTSPAQQRWLCPLLARESQANILVQSNQVSLRPISTNQHYPAPQVAGNMA
ELSQIRTLDRITTISTPTSRQFRTWLTPYSRSSGRCHMSMTG
NT seq
3369 nt
NT seq
+upstream
nt +downstream
nt
atggagacccccgcggcgcaggctgcagagaaaaaagacaaaatggaaggcaacgtgttt
tctgcccttggaaagaagccttcagagacgagagccccccaccatctcttccccaccttc
cacacgccgatccccattgacatgcgacatcacgaggggagataccactacgagcctcac
gcgctgcacgccatgcacgggcctgcagctctggccggcagtcccgtcatctccgacatc
tcgctggttcgcctctcgcccgccgccgtgcccgccggcgactcgcccttcagcccgcct
cacccgtacgtgagcccccacatggagcactacctgcgctctgtgcacggcagccccacc
ctgtccatgatctcagcggcccgaggactcagcccggcggagctggcccatgaacacctg
aaagaacggggcttgttcggactccctcctcccccgccagggaccagcccggctgagttt
taccacctgatggccagccaccggagcccgtatggtgacttgctcatgcaggggnngggg
gcccccccggggtcccacctgtctgactacatcacacccatagacgtctcccgcttctcc
agccccagattgacgccccgactgagcaggaagagagctctgtccatctcgcctctgtcg
gacgctagcatcgacctgcagacgatgatccgcacctcgcccagttcactggtcgcctac
atcaacaactcgcggtccagttcagctgccagcagttcttatggacacctgtcggttgga
ggactcagtccatctttccccttcccccaccccatggcctaccagcagctgctctctcag
cagcgagggctcagcgcctttggccacacctcacctcttatccagcctccacccaccttc
agtgcccaccagctgggcctcggactctcctcgctgcctgagagcaaccttccagcgaag
cacctgagtggcgactcggcggtcagcagcacagttgaccccctcgtcaccaaaaggtca
aaggtcaagactgaagcagaggggttgaggctgtcttctccttgttctccgaaccatcac
gacggctcgttggacctgaaggacgagggggaccgagacgattgtaagcaggagctggag
gccgtttatgagaccaactgccactgggagggctgcagcaaagagtatgacacgcaggag
cagctggtgcaccacatcaataatgaccacatccacggggagaagaaggagttcgtgtgc
cgctgggaggagtgttcgcgggaacagaaacccttcaaagctcagtacatgctggtggtt
cacatgcgccggcacacgggggagaaaccacacaagtgcacgtttgagggctgctccaag
gcctactcccgcctggagaacctgaagactcacctgcgctcacacaccggagagaaaccg
tacgtatgcgagcacgagggctgcaacaaagccttctcgaacgcctcggaccgagccaaa
caccagaatcggacgcattccaacgagaaaccgtacgtttgcaagatccccgggtgtacg
aagcgctacacggatccaagctcgctcagaaagcacgtgaagacggtgcacggcccagag
gcgcacgtcaccaagaagcaacgcggtgacctcctgccgcggcccccggggcccagggac
aacagcgagaatgacgaggggaacagggaaaggctccagagggacaacaacatgttggag
agcagctcccccagaggagcagaggactacctgcacataaagtccatcaagatggagaac
tctgtgatgtatcagcccagccctggcggtcagtcatcatgtagcagcgaaccatcacca
cttggcagtgcacccaacaatgacagtggagtagagatggcggcgaacagtgggggaagc
ctgggggacctcagcaccctggacgatttacacttcgtggaggccctgagctgtgtaggg
tctgctggcggagtcacggtggcaggaccccacttcctaaagcagctcagcacctgccag
cggttggagcatctgaagagggagacgctgaagacggtgagggactcgtgtcactggaca
ggcgagccaaccgccccggttcttggcaccaaactcccaccaattccagctactgggtcc
ctcctggagaaaacacacgttccggtgccccttcctggttcctgcttggttgatctgaac
tctgataaaactctattgggaaacctttcagaacgccgcgacagcacttccagtaccctc
agctctgtttatacccttagccgccgctcctcaggcatctccccatgctactcaagcaga
cgctcgagccaagcctcccagtttggtacaaaccgccccaacaacctcagctcagctgac
tcctatgatcccatctctgccgacatctcgcgtcgctccagccaggttagccaatttggg
gaaagtagtagaggaactgaaaggtacggtggcccacccagcccccttagcctgactcca
gctcagcattatcacctcaaagcaaaatatgcggctgccacaggagccgcaccacctaca
cctcttccacacatggaccaaacatgtccaaggccccgaacacccttatacgattgtacc
caggaatttgcagcacggagtctgatgccccatgaggtctcagctagcatgtctcgcaga
gccagcgaccctgtgaaacgcctgcttgtcactcctctcaaccagccccaactgcagcgc
tacaacagccttggaaccctcagtagaacggtggagccgcgcccaccttccctagcagat
cgacagcacttgcctcagcttcggcacacgcatccaaacagtggtatgttccgctacagc
ctacagcctctcagcatttcggagcatgcggctgtgggggtaacgaatggcgtcacgaag
gaaaatccagcgcagttccaacgaaacagtgaggccgccaacagagtcccaaccaaccag
gatcagttcccgacagcgactaaattccagcagccattgcagcagagacggatggctatc
aggaatgctaacctccccttgaccacatccaacacgagtccagcgcagcaaaggtggttg
tgtccacttctggcgagggaaagtcaggccaacattctggtccaatctaatcaggtttct
ttgagacccatcagtaccaaccagcattatcccgctccacaggttgcagggaatatggca
gagctctcgcaaatcaggactttggatcgtatcacaacaatctcgactccaaccagcaga
caattcagaacctggttaacaccctacagcagaagttctggcagatgtcacatgtcaatg
acaggatga
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integrated database retrieval system
