Takifugu flavidus (sansaifugu): 130523830
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Entry
130523830 CDS
T09160
Symbol
si:ch1073-335m2.2
Name
(RefSeq) msx2-interacting protein
KO
K25100
Msx2-interacting protein
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
130523830 (si:ch1073-335m2.2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tfs03036
]
130523830 (si:ch1073-335m2.2)
Chromosome and associated proteins [BR:
tfs03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
130523830 (si:ch1073-335m2.2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
SPOC
RRM_PARP14_3
RRM_5
RRM_YTH1
RRM_7
Motif
Other DBs
NCBI-GeneID:
130523830
NCBI-ProteinID:
XP_056885378
LinkDB
All DBs
Position
4:complement(10142743..10158343)
Genome browser
AA seq
3242 aa
AA seq
DB search
MVRETRHLWVGNLPEHVREEKIVEHFKRYGRVESVKVLRKRGSEGGVAAFVDFVDIKSAQ
KAHNAVNKMGDRDLRTDYNEPGSVPSAVRGLEDTSPSSSRDVTGFSRGTVGSVFGPPVSL
HTREGRYERRIDGSSESRERAYDHSPYGHHERSGTFDRGRHYNADYYRDRSLFAAAGPGS
SAIGGTFEASDPHFDSRIRDPFALTNSARRDLYRDDRGRHIDRTYHHRRSRSSHSSQSRH
PSPQRNTGQTSKTPHSPKRAPLSPGRGTRSHSRSRSSSSDSVSSTSSTGSGSDSNSSSSD
GSRARSVQSSAAHAPTQSSIALDSDEPRRSFGIKVQNLPVRSTDTSLKDGLFHEFKKHGK
VTSVQIHGASEDRYGLVFFRQQEDQEKALTVSKGKLFFGMLIEVTAWNGPETESENEFRP
LDGRIDEFHPKATRTLFIGNLEKTTSYQQLLDIFQRFGEIVDIDIKKVNGVPQYAFVQYS
DIASVCKAIKKMDGEYLGSNRLKLGFGKSMPTTCVWLDGLAPSITEQYLTRHFCRHGHVV
KVVFDRLKGMALILYNNTDFAQAAVRETKGWKIGGNKIKVDFASQESQMAFYRSMQTSGQ
DIRDFYEIPPERRDDRRPPYHEFAAERAYYENIRTPGLYPEEARREYAARSRDRFPELEH
YQGDHFDPRYHDDPRDYRDYRDPFEQDIRKYTYIQRERERERERFEADRSRWSPSHSRRT
VTPSVSPSPSERAPRDSERRVYSQSERSGSVSSMSSPHFDKSEKTLPEHSSKSEKASQID
RPAGAEKTKRAKRKEKGDKDKAEKSKSRKAKGQSPTNSLPESELDPGFEGGLGRVRGSEP
EANERQKSKGDSDTGTPSSAPHHESVKSEVSKSENSDFVEKNRVKKHLKSDPGNDGKESS
VESDRLAARKRRFADSSGRTIRQKRSRHEEEEPIQSSDLGTGPTHLKESDVDKHKESQRR
EIRVKSEKSGTKKDCQDDLRGQKDKVDAPLEPLDSKRHPGPTSSRKYSHEGITEQSNVGE
QEHHSSFKMGSQNAADTDKKAKTKEDHVDIDLSQSYRKQMEQNRRLNQQKQQLESDKSDK
PGSPQGSDAEDLEHRSLVHEVGKPPEDVTDNFPSHKLKKLDQFDPDMGTKRERVYRSFRQ
KNEDTEWNNTTSPGHQQIPQHNDEDLVEPSHKELPRCEEKTHPDLELLVKRTHSTQVNKP
NTPLLSAEEEQQKRWESRVKQDLLPDLTFSRTLSKSLQNHKRMDYGVWHDLEPGEVRSDP
EEDAKSHSAVPSTSVPLSERPRVDRFSDPKLAHLERNKFYSFALEQTITPDTKALLERAK
SLSSSREDNWSFLDYDSHFASLRNRKDTEKVESAPRPTPSWYMKKKKIRSESEDKLDDRK
EEPKPEEPERRELFASRFLHSAVFELDSRRLQHLERKHEEHEHPPNQQPGQQGAVDGELD
TGPVVLFHSRFLELTRLQQQKNKTQQTPPETKGDPVDLGEKAEQINSTQEPQPPTTQPPK
IVESVRVPEPKPLSPAEEVISEPQLASISVTQPVIEEIASPEEKSAAANPVPAPDQPPSL
LDEVKEDETVASVLQQPTELPSVSENEPLAAADLSDSDDKDRFSPPEGDLQIVTEDEKSP
STDKLCSRDSHEFLSSSETELDLEATQPEVPEVNIQKPPVVTEDLDVAKTELPSTCKATT
EPEEEKTLQITKVQMSLENAVDKEESVAPPQKDQKSKEVKNQPKKSKPSPIQVTPVPVLS
ASSTEKQATRKSERIDKEKLKRGSSPRAELRSAGKSPVHGLDSDTSEQQSIPLGRARRRN
VRSVYATPVEDDAPVRSGKDALESPRPARKRTDKSATQQNPEHDAPAPAPTKRGRPPKNR
KPCEDSSAVKVEKPKLDNKDTDSNESENGEQIPRMSKGKSSLHGTKSCSTQVAAVCESGS
MKKGVKMTEPEDYDQEMDFTDEYSRALQDSSSSCKEDSALKVDHKEERDKQGRDPGRDED
NLREKVREGKSNGKETDSPVDEKSILEKDRSVKGKAKLTRTPKSPVLKDLKITLNVTEVK
DLLQMELGNQEDLYKKMGPSDSNSNIPANREALCNVKENAALEKKEVSENPKIFISQEQE
LEQAVENIAKLTEPTFPSELPAQSIPPPEMKTDPEEEKPSNPASETELMAAIDSITSEES
VPVNQVPPLNEDLGSEPELQDLIRPSKEEKASTTPQAVQEESVFQVTPKKGSKGRPKTPK
RSKVQKQVRKDSKEEQLLGEELATPLVDNTVSTAKSAPEATPSATVTTVITPTSWKAEPE
PPVAKPSDSKTELGPPSDEHFQNPKSVNPQSQSPKCPKPPPVPSECIAISPSPVASRANI
RPIQPVHHRNPTSPPDWHHPKETGVSASPVMILASKENQSLPPEAEHMDMDHSTSDLRQI
LMKHKNMSLPASSSVASNLGMRDHNPTDCNIPDKPSIPEARIPPHPAPAIVRSPASLPSP
ETKSVISVIASTGTSVISRVCNPPEPEDKLNSNIANVPCLDMPLPKPTYRPGKDDPVSYH
GSSICEDGGSAARFIVDNSSLGTGSCPGLRVNTSEGVVVLSHSGQKTEGPQRISAKISQI
PQATAGDIESQQLVPIPQIKQEMYGHSHSGLQKGSSSQSDHGHPAKMPPNMPPIKQENTV
LEKMESAYQSGPQGVVKRLSQTNPQSVSYHQEYMSLKHQKKLDGADSHGADAAKPSWTSA
ISPAISPHLPSPPGNHGGFLAGSGDRAPSHIGGVKQEPRSPRKSGHPHSFAKVSSPIGSS
SPKAIPVMLTSGLPAMQQYMSGVHHPEQSVIMPPHSVPGGLGRMSPHCATQSIPVGHLVQ
GDLRVNTPPLSVMSYGMHTDSLGPPWSGPLQQRPNSPQAVGRDKVLKVNTGSMRSHEGEQ
EEQRRVHQSSVRQSSSQLKPENMQSDPRGPLRNSVQLESYMMQRDMCMLLHQQGDRLATD
PLSGHMQDTLPSSSAPSSLPLSLSPRAHVLAKAVSEKDMAKPLEAKRAHSPLSKEGMMIR
QSGQAMASPQRVPLMTAGPSGSFPEYSGVYSNPRNIHPQIPEMTVGLNQPPMSVTTTVNT
EHQLKPDTKGTQPVEMVQLLTKYPIVWQGLLALKNDTAAVQLHFVCGNKALAHRSLPLQE
GGTLLRIVQRMRLEASQLESVARRMTGDSDFCLLLALPCGRDQDDVLNQTQALKAAFINY
LQTKLAAGIINIPNPGSNQPAYVLHIFPPCEFSESHLSQLAPDLLSRISSISPHLMIVIT
SV
NT seq
9729 nt
NT seq
+upstream
nt +downstream
nt
atggttcgggaaaccagacacctttgggtgggaaatttacccgaacatgtccgagaggag
aaaattgtggagcattttaaaaggtatgggcgtgtggaaagtgttaaagtgctacggaag
cgagggtcagagggtggtgttgcagcctttgtggattttgtggatattaaaagtgcacag
aaggctcacaatgctgtcaacaagatgggagaccgggatctacggaccgactacaatgaa
cctgggtcagttcccagcgctgttcggggccttgaagacacctcaccgtctagcagtcga
gacgttacaggattctctagaggaacagttgggtcagtgtttggtccacctgtgtccctt
cacaccagagaaggacgttatgaaaggagaatagatgggagctcagaaagccgcgaacgt
gcgtatgatcacagcccatatggacaccacgaacgcagtggcacatttgacagagggcgt
cattataacgctgattattacagagatcgctccctgtttgctgctgccggcccagggagc
agtgctattgggggaacgtttgaggcatcagatccacattttgactctagaatccgagac
ccctttgctctcactaattccgcacggcgtgacctgtacagagatgaccgaggacggcac
attgatagaacctaccatcaccgccgtagccgctcgtctcattcctcacagtccagacac
ccttcgccgcaaaggaacacgggacaaacttcaaaaactcctcattcccctaaaagagcg
ccactgtcccctggaagggggacgcgatctcattccaggagccgctcttcaagttctgac
tctgtcagcagcacgagcagcacgggcagtggcagcgattcaaacagcagctccagtgat
ggatcgcgcgctcgctccgttcagtcttcagcagctcacgcacctactcagtcatctatt
gccctcgactctgatgagcctcgaaggagctttgggattaaagtacaaaacctaccggtg
cgctcaacagacacgagtttaaaagacgggctttttcatgaattcaagaaacatgggaaa
gtgacctcggtgcagattcacggagcttcagaggaccgatatggtttggtgttttttcgg
cagcaggaggatcaagagaaagccctcacggtgtctaaaggaaagctattctttgggatg
cttattgaagtcactgcctggaacggccccgaaacggagagtgaaaatgaattcagaccc
ttggatgggcggatcgatgagttccatccaaaagccacacggacgctgttcataggcaac
ctggagaagaccaccagttaccaacaactgcttgacatttttcaaagatttggagaaatt
gtggacattgacatcaagaaagtcaatggagttcctcagtatgcctttgtgcaatattct
gatattgccagtgtctgcaaagccattaagaagatggatggagaatatttagggagcaac
aggctgaagctcggctttggaaagagcatgcctacaacatgtgtctggttggatggtttg
gctcccagtattacggagcagtacctcacccgacatttctgtcgacacggacatgtggtg
aaggtcgtgttcgatcgactgaaagggatggctctcatcttatataacaacacagacttt
gctcaggcagctgtgagggagaccaaaggttggaaaattggtggtaataaaatcaaggtg
gattttgccagtcaagagagtcagatggcattctacagatctatgcagacatctggtcaa
gatattagagacttctatgaaattccccctgagagacgagatgaccgcagacctccatac
catgagtttgcagcagaaagggcctactatgagaatataagaacccctggcctctatcca
gaagaagccagaagagagtacgctgctcgcagcagagatcgatttcctgaacttgaacac
tatcagggggatcacttcgacccacgatatcacgatgacccaagagattacagagactac
agagacccgtttgagcaagacattcgaaaatacacgtatatacaacgagagagagagcgg
gagcgagaacgatttgaggctgatcgcagtcgctggagcccatcccattctaggagaact
gttactccatctgtgtcaccatcgccgtccgagcgcgcgccaagagactcagaacgaaga
gtttacagccagtccgagcgaagcggcagcgtgagctccatgtcatcgccgcactttgac
aaatctgagaagaccttgcctgaacattcctcaaaaagtgaaaaggccagccagatcgat
cgacctgccggcgctgagaaaaccaaacgtgctaaacgaaaagaaaagggtgacaaagac
aaagctgagaagagtaaatcaagaaaggccaaagggcaatccccaaccaactctctccct
gaatcagagctagacccaggatttgaaggaggattgggaagagtgaggggatcagaaccg
gaagcaaatgaaaggcagaagtccaaaggggatagcgatactggaaccccatcatcggca
ccgcatcacgagtccgtaaaaagcgaagttagcaaaagtgagaattccgacttcgttgaa
aagaatcgtgtcaagaaacacctcaagtctgatcctggaaacgatgggaaagagtcatct
gtggaatcggatcgcctcgcagccagaaaaagacgttttgccgattccagtgggagaacc
attcgtcagaaaaggagcaggcacgaggaggaagaaccgatccagtcttctgacttgggt
accggtcccacacatttgaaggagtcggacgtggacaaacacaaagagtcgcaacgcagg
gaaattagagtcaaaagtgaaaaaagtggcaccaagaaggactgtcaagatgatctaagg
ggccaaaaagataaagtcgatgcacccttggaacccttggactcaaaacggcatccaggg
cctacttcatccaggaagtattcacatgaggggatcacagaacaaagcaatgttggagaa
caagaacaccactcttcttttaaaatggggtcccagaatgctgctgacacggataaaaag
gctaaaaccaaggaggaccatgttgatattgacctctctcagagttatcgcaagcagatg
gagcagaatcggcggttgaaccaacagaagcagcagctggagtctgacaaaagtgacaaa
ccaggaagtcctcagggtagtgacgcggaggacttggaacaccgaagtctagtgcatgaa
gtcggcaaacctcccgaagatgtcacggataatttcccctctcacaaattaaagaaactt
gaccaatttgaccctgatatggggactaaaagggaacgcgtctacagaagcttcagacaa
aaaaacgaagatacggaatggaacaataccacctctccgggccatcagcagatccctcaa
cataacgatgaggacttagtggagccctctcataaagaattgcctagatgtgaggagaaa
actcacccagatcttgagcttttggtcaaaaggacacacagcacgcaagtaaacaaacca
aacactcctttacttagtgcagaagaagagcaacagaaaaggtgggagagtagagttaaa
caagacttgttgcccgacttgaccttttccagaacactcagtaaaagccttcaaaatcac
aagcgtatggattatggcgtctggcatgacttggagcccggcgaagtccgatctgacccc
gaggaagatgccaaatctcactctgcagtcccatcgacgtctgtgccactctcagagagg
ccgagggtcgacaggttttcagacccaaagcttgcacatctcgaaagaaacaagttttac
tcctttgcactcgaacagaccatcacgcctgacacaaaagctctgcttgaacgtgcaaaa
tccctttcatcttctagagaggacaactggtcctttttggactacgattctcactttgca
agtttacgcaacagaaaggatactgaaaaggtagaatcggcgccacgaccgacaccctcc
tggtacatgaaaaagaaaaagatccgaagtgagtccgaagacaaacttgatgacaggaaa
gaagaacccaaaccagaggagccagaacgcagggaactatttgcatctcgcttccttcat
agtgccgtttttgagctggattctagacgacttcagcacctggagcgtaaacacgaagaa
cacgagcacccacccaatcaacagcctgggcagcagggagcggtagatggagagctcgat
acggggccggttgttctttttcatagtcgattcttggaacttaccagattgcaacaacag
aagaataaaactcagcagactccgccagaaacaaaaggagaccccgttgatttgggcgag
aaagcagagcaaatcaactctacgcaagagccacagccaccgactacgcagcccccgaaa
attgtagaatctgtcagagtgccagaaccgaaacccctcagtcctgctgaagaggtcatt
tctgaaccacagcttgcatctatttcagtcacccaacctgtgatcgaagagattgcatca
ccggaagagaaaagtgctgccgccaaccccgtacctgcccctgatcagcctccgtctctg
ctggatgaggtgaaagaagatgaaactgtggcctctgtgctccaacaaccaaccgagttg
ccatcggtttctgaaaatgagccactggcagcagctgatctctccgactcggatgacaaa
gacaggttttctcctcctgaaggcgatttgcaaattgtcaccgaagatgaaaagtcgcct
tctacagacaaactatgcagccgtgattctcatgagtttcttagcagttcggaaacggag
ctggatcttgaagccacacagcccgaagtgcccgaagtcaacattcagaagccacctgtt
gttacggaggacttggatgtagccaagacggagctcccatcaacatgtaaagcgacaaca
gaacccgaggaagagaaaacacttcaaattaccaaagtgcaaatgtctctcgaaaatgca
gtagacaaagaggagtctgtcgccccgccccagaaggaccaaaaatcgaaagaagtgaaa
aaccaaccaaaaaagagcaaaccgtctcccattcaagtcactccggttccagtcttgtct
gcatcgagtacagagaaacaagcaacgcgtaagagcgagcgcatcgacaaggagaagtta
aaacgcggctcgtccccaagagccgagttgaggtccgcgggtaaatctcccgtgcacgga
ttagactctgacacatcggagcagcagagcatcccgctgggaagagcaagacggagaaat
gtcaggtctgtgtatgcgacccccgttgaagacgatgcaccggttcgctctggaaaggat
gctctagagtccccgcggcctgcacgcaaacgcacagacaaaagtgcaacgcagcaaaac
cccgagcacgatgcgcctgctcctgctcccacgaaacgcggccgccccccaaagaatcgc
aaaccgtgtgaagatagctcagcagttaaagtagaaaaacccaaactggacaataaagac
acagactccaacgaatcagaaaatggtgaacaaattccaaggatgtcaaaaggaaaatca
tcccttcacggaacaaagagctgttcgactcaggtcgcagcagtgtgtgaatctggatca
atgaagaaaggagtcaaaatgacggaaccggaggactacgaccaggaaatggatttcaca
gatgagtattccagggctttgcaggattcatcgagttcatgcaaagaagattcggcactc
aaagttgaccacaaagaggagagagacaaacaaggaagggacccgggaagagacgaggac
aatctccgggaaaaggttcgtgagggtaaatcaaacgggaaagaaacggattctcctgta
gatgaaaagtccatcttggaaaaagacagaagtgtcaaaggaaaggctaaattaacaagg
actccgaaatctcctgtcctcaaagacctcaaaattactctaaatgtcacagaggtgaaa
gacctccttcagatggaacttggtaatcaagaggatttgtacaaaaaaatgggacccagc
gacagtaattcaaatattcctgctaatagagaagccttgtgtaatgtaaaggaaaatgcc
gctttggaaaagaaagaggtgtcggaaaatccaaaaatcttcatttctcaggagcaagag
ttggagcaggctgtggagaacatagcgaaactcacagaaccaacatttccttcagagctc
ccggcacaatccatcccaccccctgaaatgaagactgacccagaagaggaaaagccttca
aatcccgccagtgaaaccgaactcatggctgctattgactcaataacttcagaggaatct
gttcctgtaaaccaagtcccccctctgaacgaggatttagggtcagaacccgagttgcaa
gacttgattcggccttccaaggaagaaaaagcttcaacgactccacaagctgtacaagaa
gagtctgtgtttcaggtcacccctaaaaagggatccaaaggaagaccaaaaacgcccaaa
cgctctaaagttcaaaaacaagtaagaaaggattcaaaagaggaacaattattaggtgag
gagttggctacgcctttagtagacaacacagtttccaccgccaagagtgctcctgaagcc
acgccatcggccacggtcactacggttatcactcctacttcttggaaggcagaacctgag
cctccagtcgctaaaccctcggatagcaagacagagttggggccgccgtctgacgaacac
tttcaaaatccaaaatctgtcaacccccagtctcagagcccgaaatgccccaaaccgcca
ccggtgccatccgagtgcatcgccatttctccatctccagtagccagcagggcaaatatc
agacccattcaaccagtgcaccacagaaatcccacctctccaccagactggcaccatcct
aaggaaactggcgtttctgcttcgcctgttatgatcttggcttccaaggaaaaccagtcc
ttacccccagaagctgaacacatggatatggatcacagcacaagtgatttaagacagatt
cttatgaaacacaaaaatatgtcactgccagcaagtagctctgttgctagtaatctcggt
atgagagatcacaaccctactgattgcaacattccagataaaccatcaatacccgaggcc
agaattccaccgcatccagctccggctattgtccggtcaccagcctctctcccttctcca
gagaccaagtctgtcatctccgtcattgcatctacgggaacctctgtcatcagccgcgtt
tgcaatcctcccgaacccgaggacaagttaaactccaacattgccaatgttccctgtttg
gacatgcctttgcccaaacccacctatcggcccgggaaagacgatcccgtgtcgtatcac
ggctcatctatttgtgaggacgggggaagtgctgctcgcttcatcgttgataactcctcg
cttggtacaggatcctgcccagggctcagggtcaacacgtccgaaggggttgtggtcttg
agccactcgggccagaaaacggagggaccacaaaggattagcgccaaaatcagtcagatt
cctcaagcgactgctggcgatattgaatctcaacagctggttcccattccccagataaaa
caggaaatgtacggtcattcccactcagggcttcagaagggatcttcatcacagtcggac
catggtcatcctgccaaaatgcccccaaacatgcccccaattaaacaagaaaacacagtt
ttggaaaaaatggagtctgcctaccaaagcgggccccaaggtgttgtgaagcgtctgtcg
cagactaacccgcagtcggtgagttaccaccaggagtacatgtcgctcaagcatcagaag
aaattggacggcgctgattcccacggcgccgatgcagcaaaaccgtcgtggacctctgcc
ataagtcctgccataagccctcatttgccctcccctcccggcaaccacggaggcttcctc
gcaggatcaggtgacagagctccttcgcatattggtggagtcaaacaagaaccacggtct
ccccgcaagtcaggccacccgcactcgtttgctaaagtgtcctcccccattggctcctcc
tcgccaaaggctattccagtcatgttgaccagcggccttcctgccatgcaacaatacatg
tcgggcgtccatcacccagaacagtcggtcatcatgccaccccacagtgtgcccggaggc
ctggggcgcatgtctcctcactgtgccacccagtccattccagtaggacatcttgtccaa
ggagatctaagggtgaatactccacctctctctgtcatgagctatgggatgcatactgac
tcacttggccccccttggtctggccccctgcagcagcggcccaactctccccaggctgtt
ggcagagacaaagtcctgaaggtgaacaccggttctatgcggagtcacgagggagagcaa
gaagaacaaagacgtgtccaccagtcttctgttagacaatcctcctctcagctaaaacca
gagaacatgcagtcggaccctcgtggaccgctgcgaaatagcgtccagctggaatcgtac
atgatgcagagagacatgtgcatgctcttgcaccagcagggagaccgtttagccaccgac
cccctttctgggcacatgcaagacaccctcccatcctcctcggcaccttccagtctaccc
ctctccttgtccccaagggcacatgtgttagctaaagcagtttcagagaaggacatggcg
aagccgttggaggccaagagggcgcactctcctctctccaaagaaggaatgatgatccgg
cagtcgggacaggcaatggcgtctccccaacgggttccgctgatgacagcaggacctagt
ggctcgttcccagaatactcgggggtgtattcgaaccccagaaacatccaccctcagata
ccagagatgacggtgggacttaatcagcccccaatgagtgttacgacaaccgtgaacaca
gagcatcagctcaaacccgacaccaaggggacgcagccggtggagatggtgcagttgctc
acaaaatacccgatcgtgtggcaaggattgttggcgctgaagaacgacacggccgcagta
cagttgcattttgtttgtggcaacaaagctttggctcatcggtccctgcccctacaagag
gggggcacgttacttagaattgttcagagaatgagactagaggcgtcacaactggagagt
gtagcccgaagaatgacgggggacagcgacttctgtctcctcctggctctgccttgtgga
cgagatcaagacgatgtcctcaaccaaactcaagctcttaaggctgcctttattaactac
ttgcagacaaagttggctgctggtatcatcaatatccccaacccaggttccaatcagcct
gcctacgtgctacatatcttcccaccatgtgagttttcggaaagccacttatcccagctg
gcccctgatcttctcagcaggatctcgagcatctctccacacctcatgattgtcatcacc
tctgtatag
DBGET
integrated database retrieval system