KEGG   Takifugu flavidus (sansaifugu): 130523967
Entry
130523967         CDS       T09160                                 
Symbol
snrpb
Name
(RefSeq) small nuclear ribonucleoprotein-associated proteins B and B' isoform X1
  KO
K11086  small nuclear ribonucleoprotein B and B'
Organism
tfs  Takifugu flavidus (sansaifugu)
Pathway
tfs03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tfs00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    130523967 (snrpb)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tfs03019]
    130523967 (snrpb)
   03041 Spliceosome [BR:tfs03041]
    130523967 (snrpb)
   03032 DNA replication proteins [BR:tfs03032]
    130523967 (snrpb)
Messenger RNA biogenesis [BR:tfs03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     130523967 (snrpb)
Spliceosome [BR:tfs03041]
 Complex A
  U1 snRNP components
   Sm proteins
    130523967 (snrpb)
  U2 snRNP components
    130523967 (snrpb)
 Complex B
  U1 snRNP components
    130523967 (snrpb)
  U4/U6.U5 tri-snRNP components
    130523967 (snrpb)
 Complex C
  U2 snRNP components
    130523967 (snrpb)
DNA replication proteins [BR:tfs03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     130523967 (snrpb)
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 130523967
NCBI-ProteinID: XP_056885604
LinkDB
Position
4:complement(77077..80595)
AA seq 242 aa
MSQFQTVGKSSKMLQHIDFRMRCILQDGRIFIGTFKAFDKHMNLILCDCDEFRKIKPKNS
KQPEREEKRVLGLVLLRGENLVSMTVEGPPPKDTGIARVPLAGVAGGPGVGRAAGRGVPA
GAPMPQAPAGLAGPVRGVGGPSQQVMTPQGRGTVAAAATGASIAGAPTQYPPGRGAPPPM
GRGAPPPGMMGPPPGMRPPMGPPMGMPPGRGAPMGMPPPGMRPPPPGMRGPPPPGMRPPP
RP
NT seq 729 nt   +upstreamnt  +downstreamnt
atgtcacaatttcagacggtggggaaaagcagtaagatgctgcagcacatcgacttccgg
atgaggtgcatcctgcaggatggaaggattttcattggaaccttcaaggcctttgacaaa
cacatgaacctcatcctgtgcgactgtgatgaattccggaagatcaaaccaaagaactca
aagcagccagaacgtgaagagaagagagttctgggattggttctgctaagaggagaaaat
ctggtttccatgacggtggagggtccaccccctaaagataccggtattgctcgggttcca
ttggcaggtgttgcgggaggtccaggtgtgggccgagctgcgggtaggggtgttcctgca
ggagcgcccatgcctcaggccccagctggtctggcggggcctgtccgaggtgtgggcggg
ccatcacagcaggtcatgaccccacagggcagaggaactgttgcagcagctgccacgggg
gccagcatcgctggggctccaacacagtatccacctggacgaggagctccacctccaatg
ggccgaggagctccacccccaggtatgatgggaccacctcctggcatgcggcctccgatg
ggtcctcccatgggaatgccccctggtcgaggagcgccgatgggaatgcctcctccgggc
atgaggcctccacctcctggcatgagaggaccacccccgcctgggatgagaccgcctcct
cgaccctga

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