Takifugu flavidus (sansaifugu): 130526503
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Entry
130526503 CDS
T09160
Name
(RefSeq) TNF receptor-associated factor 2-like isoform X1
KO
K03173
TNF receptor-associated factor 2 [EC:
2.3.2.27
]
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs04010
MAPK signaling pathway
tfs04137
Mitophagy - animal
tfs04141
Protein processing in endoplasmic reticulum
tfs04210
Apoptosis
tfs04217
Necroptosis
tfs04621
NOD-like receptor signaling pathway
tfs04622
RIG-I-like receptor signaling pathway
tfs04920
Adipocytokine signaling pathway
tfs05132
Salmonella infection
tfs05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
130526503
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
130526503
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
130526503
09143 Cell growth and death
04210 Apoptosis
130526503
04217 Necroptosis
130526503
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
130526503
04622 RIG-I-like receptor signaling pathway
130526503
09152 Endocrine system
04920 Adipocytokine signaling pathway
130526503
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
130526503
09171 Infectious disease: bacterial
05132 Salmonella infection
130526503
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tfs03019
]
130526503
04121 Ubiquitin system [BR:
tfs04121
]
130526503
Enzymes [BR:
tfs01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130526503
Messenger RNA biogenesis [BR:
tfs03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
130526503
Ubiquitin system [BR:
tfs04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
130526503
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
TRAF_BIRC3_bd
zf-TRAF
TRAF2_zf
zf-C3HC4
TRAF3_RING
zf-C3HC4_2
zf-RING_4
Sina_ZnF
Tropomyosin
zf-C3HC4_4
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
130526503
NCBI-ProteinID:
XP_056890230
LinkDB
All DBs
Position
5:14652435..14675389
Genome browser
AA seq
568 aa
AA seq
DB search
MASQEPSPPSSLEGNKPGFPKKILANNLENKHLCKSCQKVLRRPLQAQCGHRFCSFCFHK
IVSAGPQTCSACISEDLFEEPASILKLGGAFPDNAARREVEALAAVCPNEGCIWTGTIKE
FEARHEDSCDFMIILCPSCKELMRVNEQERHNERECPERTLNCKYCKDPFQLKNIKAHDE
ICPKYPMICEGCSKKKIPREKYVDHIKYCSKFKSPCRFHVVGCNTSVEKEKIHDHERQCS
YEHLNLLLHFIMGIKISLESLQPQSLDVASHKLLELHQSLRDLELKMSQISGSGLTIAQG
VCAPSVATSFTPLPSSVRAALELQLQSEKTKVAELSRRCQDLELKVRTFENIVCVLNREV
ERSCTTMEAYNRQHRLDQDKIEILNNKVRQLERTVSLRDLSIVEIDEKMRELSAATYDGV
FVWKISDFTKKRQDAVAGRAPAMFSSAFYTSKYGYKMCLRIYLNGDGTGRGTHLSLFFVV
MRGHSDALLKWPFNQKVTLMLLDQNNREHIIDAFRPDISSSSFQRPVSDMNIASGCPLFC
PLPKLDCKNSYIRDDTIFIKVIVDLTGL
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atggcttcacaggagccgtctccaccgtcttccctcgagggcaacaaaccaggattcccg
aagaaaattctggcaaacaacctggaaaacaaacacttgtgtaaatcgtgccagaaggtc
ctcagaaggccgttacaagctcagtgtggacaccgtttctgctccttctgttttcacaaa
atagtgagtgcgggaccacagacatgcagtgcatgtataagtgaagatctgtttgaggaa
cctgcctctattctcaagttaggtggtgctttccctgacaatgcagcccggagggaagtg
gaggccttggctgctgtctgtcccaatgaaggatgcatatggacaggaactatcaaagaa
tttgaggctaggcatgaggacagctgtgacttcatgattatcttgtgtccttcctgtaaa
gagcttatgagagtcaatgaacaggagcgtcacaatgaaagagaatgtccggagcggact
ctcaactgcaagtactgcaaagaccccttccagttaaagaacatcaaggctcatgatgaa
atttgtccaaagtatccaatgatatgtgaaggttgttcaaagaaaaagatcccaagggaa
aagtatgtggatcatattaagtactgcagtaaatttaaatcaccatgcagatttcatgtt
gttggctgcaacacatcagttgaaaaagagaaaatccatgaccatgagcgacagtgttcc
tatgagcatttaaatcttctgctgcatttcatcatgggcatcaagatcagcctggagagc
ttgcagcctcagagtctggatgtggccagtcacaagttgttggagcttcatcagtccctc
agggatcttgaacttaagatgagccagatcagcggtagtggtctgaccattgcacagggt
gtttgcgccccatctgtagcgacctctttcacaccattacctagtagcgtaagagctgct
ctggagttacagttacaaagcgagaagactaaggtggctgagctgagccggcgctgccag
gacctcgagttaaaagtgagaactttcgaaaacatcgtgtgtgtcctcaacagggaggtg
gagcgctcatgcaccaccatggaagcatacaaccgccagcatcgactggaccaggacaag
attgaaatcctaaacaacaaggtccgtcagcttgagaggactgtgagtctgagagactta
tccatcgtggagattgatgagaaaatgagggagttgtctgctgccacatatgatggtgtt
tttgtctggaagatttcagatttcactaagaagaggcaagatgctgtggctggtcgtgct
cctgccatgttttcatccgcattttatacaagtaaatatggctataagatgtgcctgcgg
atctacctgaatggtgatggcacaggccgtgggacccacttatctctattttttgtggtc
atgagaggccacagcgacgccctccttaaatggcctttcaaccaaaaggtcaccctaatg
ctgcttgaccagaacaacagggagcacataatcgatgctttccggcccgacatctcctcc
tcgtcctttcagaggccagtcagtgacatgaatattgccagcggttgccccctcttctgt
cctctccctaagctggactgtaaaaactcctacatacgtgatgacaccatcttcatcaag
gtcatcgtggatctcactggcctctag
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integrated database retrieval system
