Takifugu flavidus (sansaifugu): 130526781
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Entry
130526781 CDS
T09160
Symbol
ldlrb
Name
(RefSeq) low-density lipoprotein receptor
KO
K12473
low-density lipoprotein receptor
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs03272
Virion - Hepatitis viruses
tfs04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
130526781 (ldlrb)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
130526781 (ldlrb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tfs04131
]
130526781 (ldlrb)
Membrane trafficking [BR:
tfs04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
130526781 (ldlrb)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
SGL
Vgb_lyase
Motif
Other DBs
NCBI-GeneID:
130526781
NCBI-ProteinID:
XP_056890671
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All DBs
Position
6:300858..310471
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AA seq
856 aa
AA seq
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MLGPRRRLAGLSCCCLLMLMFFSPAADAAFICGSTQFKCGNGRCVTSRWICDGTDDCGDG
TDELQETCASKTCLPSEYNCGAPLNQCIPGGWHCDDKADCGNGADERNCTAKECKDNEFQ
CANGHCVSASFVCDKDNDCSDGSDEASCPKPTCSSRSFQCNNSVCVPAQWRCDGDSDCAD
GSDEWPQNCDGRQKKPASRCSPHEFQCADGECIHGSWRCDGGTDCKDHSDEVNCSRSRCP
GDQFQCFDGTCIAGTLQCDGKHDCSDLSDELGCHIARACEGPAMFKCNSGECISMEKVCN
KQRDCVDNSDEPDEECDRNECQTNNGGCSHYCSDLKLGFNCSCPAGYSLKMDKKTCEDID
ECAEPDTCSQVCINLVGSYKCDCMGGYQIDPLTKTCKAESGVVPMLYFTNKHDVRRMTLD
RSEYVRLIPQLKNVVALDIDMPNKTIFWSDLSLKKIYSSKIDTAGNSSHHTVVIDSGIGA
PEGLAVDWIHGNIYWIDSALRTISVATTDGSRRKTLITENLEKPRAIVVDPINNFMFWTD
WGQQAKIEKCGLNGMDRIALVTDNIVWPNGITLDVSNHRLYWVDSKLHTLSSIDVNGGTR
HSVLFSEEHLSHPISLTVFQNQVFWTDMDHRTVMSANRLTGRDIRTLAAELDQPEDIILF
HDLKQPTGTNWCSQGNGLNGGCEFLCLPAPLINQRSAKFTCACPDDMFLGSGMRECVKSP
VAPPDASKTEAPLQPNAPTTKAPFATTARTPPQTGPTRQAAATAQGNKLAAVPGEAPSSH
PVALYVVLPMMVTALVAFGAVLVWRHWRLKNTNTIHFDNPVYQKTTEDELHIYRNGSDGY
IYPERQMLSTDDIDVA
NT seq
2571 nt
NT seq
+upstream
nt +downstream
nt
atgttgggaccgcggaggagactcgccgggctctcgtgctgctgtctgctgatgctgatg
ttcttctctcccgcagcagacgccgccttcatttgcggctccactcagtttaagtgtgga
aatgggaggtgcgtcaccagcaggtggatttgtgatggaacggacgactgtggggatgga
actgatgaactccaggagacctgcgcgtctaaaacctgtctgccgtccgagtacaactgt
ggcgctccgctgaaccagtgcatcccaggagggtggcactgcgacgacaaggccgactgt
ggcaacggggccgacgagagaaactgcactgccaaggaatgcaaggacaacgagtttcag
tgtgccaacggccactgtgtctccgcctcctttgtctgcgacaaggacaacgactgttcc
gacggctcggacgaggcctcctgccccaaacccacctgcagcagccgctccttccagtgc
aacaactccgtgtgtgttccggcccagtggcgctgcgacggcgacagcgactgcgccgac
ggctccgacgagtggccacaaaattgcgacgggcgccagaagaagccggccagtcgctgc
agcccccacgagttccagtgtgcggatggggagtgcatccacggcagctggaggtgcgat
ggaggcacggactgcaaggaccactcggacgaagtcaattgcagtcgttccagatgtcct
ggggatcagttccagtgtttcgatggcacctgtatcgccggcaccctccagtgtgacggg
aaacacgactgctctgacctcagcgatgagctcggctgccacatagccagagcatgcgaa
ggccccgccatgtttaagtgtaactcgggggagtgtatcagcatggagaaagtgtgcaac
aaacagagagactgcgtggacaattctgatgagcctgatgaagaatgtgatcgtaatgag
tgccagaccaacaacggcggctgctcacattactgcagcgatctgaagcttggcttcaac
tgctcctgtcccgctggatacagcctgaagatggacaagaaaacctgtgaagacattgac
gaatgtgcggagccagacacctgcagtcaggtctgcatcaacctagtgggcagctacaag
tgtgactgcatgggggggtaccagattgaccctctgaccaagacctgcaaggctgagtca
ggtgttgtgccgatgctgtatttcacaaacaaacacgatgtgaggaggatgactttggac
cgcagcgagtacgtccgtctaatccctcagctgaaaaacgtggtggctctggacatcgac
atgcccaacaaaacaatcttctggtctgatctgtctctgaagaagatttacagctccaag
atagacacggctggaaactcctcacaccacaccgtagtcattgacagtggcatcggggct
cccgagggcctggcagtggactggatccatggcaacatctactggattgacagcgcttta
cggaccatctctgtggccacgacggacggcagcaggagaaagacgctgatcacggaaaac
ctggagaagccgcgagccattgtggtcgacccgatcaataactttatgttctggaccgac
tggggccagcaggcaaaaatagagaagtgtggcttgaacggaatggatcgcatcgccttg
gtgactgacaacattgtgtggcccaacggcatcaccctcgacgtgagcaaccaccgtctg
tactgggtggactctaagctgcacacgttgtccagcatcgacgtgaacggagggacacga
cacagcgttctgttcagtgaggagcatctgtcgcatcccatctccctgaccgtgttccag
aatcaagtgttttggaccgacatggaccacagaactgttatgagtgccaaccgcctcaca
ggaagagacatcagaacgttggcagcggagcttgaccagccggaggacatcattctcttc
cacgacctcaaacagccaacgggaacaaactggtgcagccagggtaacggcctgaacggc
ggctgtgagttcctgtgcctccccgcccccctgatcaaccagcggtctgccaagttcacc
tgcgcctgtccggacgacatgttcctgggctccggtatgagggagtgtgtgaagagtccc
gtcgctcctccggacgccagcaaaacggaggcgccgctccaacccaacgctccgacgacc
aaggcgccctttgccaccactgctagaacccccccccaaactggccccacccgtcaggct
gctgccacggctcaaggaaacaaattggcagctgtgcccggagaagcgccgtcctcccac
ccggtcgctctctacgttgtgttgccaatgatggtcacggctctggtggcgttcggagcg
gtactggtgtggagacactggcggctgaagaacaccaacaccatccacttcgataatccc
gtgtaccagaagaccacagaggatgagctccacatctacaggaacggctcggacggctac
atttatcccgagaggcagatgttgagcacggacgacatcgatgttgcttga
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