Takifugu flavidus (sansaifugu): 130526981
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Entry
130526981 CDS
T09160
Symbol
kdm2aa
Name
(RefSeq) lysine (K)-specific demethylase 2Aa isoform X1
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
130526981 (kdm2aa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tfs03000
]
130526981 (kdm2aa)
04121 Ubiquitin system [BR:
tfs04121
]
130526981 (kdm2aa)
03036 Chromosome and associated proteins [BR:
tfs03036
]
130526981 (kdm2aa)
Enzymes [BR:
tfs01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
130526981 (kdm2aa)
Transcription factors [BR:
tfs03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
130526981 (kdm2aa)
Ubiquitin system [BR:
tfs04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
130526981 (kdm2aa)
Chromosome and associated proteins [BR:
tfs03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
130526981 (kdm2aa)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
130526981 (kdm2aa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
F-box-like
JmjC
JHD
F-box
Cupin_8
PHD
C1_1
Roughex
LRR_At1g61320_AtMIF1
LRR_4
Motif
Other DBs
NCBI-GeneID:
130526981
NCBI-ProteinID:
XP_056890967
LinkDB
All DBs
Position
6:10578593..10591043
Genome browser
AA seq
1335 aa
AA seq
DB search
MDDSKPRYSKRLRAGTRRHYHDDGISDEEIDGRRTFDLEEKVSSQRFRSDLVNHMEGKDF
TYEFIQRNGLREPIIFEKPDGLGIKMPDPDFNVNDVKMFVGSRRMIDVMDVSTQKGTEMS
MAQWTRYYETPLSQREKLYNVISLEFSHTKLENLVRRPTTVDLIDWVDNMWPRHLKERQR
DSTNSITDMQYPKVQKYCLMSVEGCYTDFHIDFGGTSVWYHILRGSKIFWLIPPTPQNLE
LYENWVLSGKQGDVFLGDRVSDCQRIELKQGYTFIIPSGWIHAVYTPVDSMVFGGNFLHS
FNIPTQLNICNIEDRTRVPTKFRYPFYYEMCWYVLERYVFSLTKTSYLTPEFQKHSLGIG
LKKPSNLANEKGIVDDEESSEGEEEEEQEELSDKPAVKVHLTPLELEGLWNLLGKLEDLP
SNKKCIPSGIHNSQALVSHIKALLKEHANDNPKLSYTGNPIITWPKRVGVCEKAPERLLP
SWYQPPPPPPPPPPRPKPATISIIPRPQKPASSMSVLRRRRVRCKRCEACMRPECGECNF
CRDMKKFGGPGKLKQTCVLRQCLSPGLPLSAVCEVCKEPNQEESGDTSLTLMECSNCAQI
VHPACLTVQGEGLINKDLPSCWECPKCVQGVTDHESSGSDESMAAGHQQHIPPYGPLVLR
LGPGQPGGSQLDGEVVHCGFFPPPPPPLPYCSSSSSSSASLLLVAAPLPSQPISSRLCKG
DRGDGLSLKRKSSALLDARMAKIYRQQRHSRDEDDSASDDEDSVSQRRRMALHVRGGAHS
SRRGFGANRRGLLRGGSSHRGSRGALMRHGSSSAFKLKRGMAMRESGRRGRGVRLRGGSR
MQRRGEESDESEDEEDDDDEEEEIDSDDGGKDRYRRRRRRRTDDLDDDGDDDEEEEDDDE
SEGQEFDPEDEMDMVEDDDEEMDEDEEGLWDSDREPPVLLMSDLNDDLLSGSYLTVTLQR
PDKAKKQTGSIVPKLEAAMGPRMPAGGSGPQLGFIQRKTALSKHGPARFSDGPTDGLTPR
GPGRPRGCHGDRGRKDFSASSSEEEESVAPSLSLLSLPSFKDVGNDSGGEKEVWVSVFTY
LNRAELLACMTVCKAWYKWSCDKRLWSHIDVSRCSPLSNQALAGIIKRQPYSLDLSWTPL
AKRQLNCLLTRLPGLRELRVAGLAWSCLSALVSPTLPCLQLLDLRWCEGIKDAQIKDLIM
PPDSESSRSRLRNLVTLRLSGLDISESILKLLQRHMTQLERLELSHCKNITDSSVALLAA
PGTNTRNNLTELTLAGCGELTDYCLSYMKRLSSLTLLDLRGCRNVSRRACDAFIADLSHI
TLYCMMEEKLIQRID
NT seq
4008 nt
NT seq
+upstream
nt +downstream
nt
atggacgattcaaagccacgttacagcaagaggctgcgggctgggacccggcgacattac
cacgatgatggcatctcggatgaagagattgacggcaggaggacgtttgacctggaggag
aaagtcagcagtcagaggttccgttctgatctggtcaatcacatggagggaaaagatttt
acgtatgagttcatccagagaaatgggctgagggaaccaatcatcttcgagaaacccgat
ggattgggaatcaagatgcctgatcctgacttcaacgtgaacgatgtcaagatgtttgtc
gggagcagaagaatgatagatgtgatggatgtcagcactcaaaaggggacggagatgtcc
atggctcagtggacacgttactatgagacgcctctctctcagagagagaagctctataat
gtcatcagcctggagttcagccatacaaagttggagaatctagtccggaggccgaccacc
gtcgatctcatagactgggttgacaacatgtggcctcgacacctgaaagagagacagagg
gactcgaccaactctatcactgacatgcagtatcccaaagtacaaaagtactgcctgatg
agtgtggagggctgctatactgatttccacatcgactttggtggaacttcagtgtggtac
cacatattgagaggaagcaagatattctggttgatcccacccacacctcagaacttggag
ctctatgagaactgggtcctctctgggaagcagggagacgttttcctgggagaccgagtg
tctgactgccagaggatcgaactaaagcagggctacaccttcatcatcccctcaggttgg
attcacgccgtttacacccctgtggattccatggtgtttggaggaaacttcctgcacagt
tttaatattccaacgcagctgaacatctgcaacatcgaagatagaacgcgggttccaact
aagttccgttaccccttctattatgaaatgtgctggtatgtgttggagcgatatgtcttc
agcctcaccaagacttcttacctcacaccagagtttcagaaacactctttaggcattggt
ctgaagaaaccatccaatttagccaatgagaaggggatagtggatgatgaagagtccagt
gaaggagaagaagaagaagaacaagaagaactttctgacaaaccagcagttaaagttcat
ttaacacccctggagttggaaggcctctggaacctgttgggtaaactggaggatttgcct
tccaacaagaaatgcattccatcaggaatacacaactcccaagcactcgtctcacatatt
aaggctcttttgaaggaacacgctaacgacaatcccaaactgtcctacacaggaaacccc
atcatcacgtggccaaagcgagtaggtgtttgtgagaaagcacctgagagactgctgccc
tcgtggtaccagcctccaccaccaccgccccctcctcctcctcgtcctaaaccggccacc
atatcgatcatcccacggccacagaagccagcttcctccatgtctgtactgcggcggcgc
agagtcaggtgtaagcggtgcgaagcctgcatgaggccagagtgtggagagtgtaacttc
tgcagagatatgaagaagtttggtgggccggggaaactaaagcagacctgcgtgctgcga
cagtgtctttctcccggtctaccactgtctgccgtttgtgaagtctgcaaagagcccaat
caagaggaaagtggagacacatcactcacactgatggagtgttccaactgtgcacagatt
gtccatccagcctgtctcacggttcagggtgaaggcctgataaataaagatcttcctagt
tgttgggaatgtccaaagtgtgtccaaggtgttactgaccatgagtcatcaggcagtgat
gagtctatggctgcaggccaccagcagcacatccctccttatggccccctggtcctcagg
ctgggaccggggcaacctgggggctcccaactagatggggaggtggtccactgtggtttc
ttccctcctcctcctcctcctcttccttactgctcttcctcctcctcctcctcagcgtca
ctactattggtggcggcccctctgccttctcagccaatcagctcgagactgtgtaagggg
gacagaggtgacggcctgtcactaaagaggaagtcctccgctctgctggatgctcgtatg
gcaaagatttatcgtcaacagagacacagccgtgacgaagatgattctgccagtgatgat
gaggattcagtttcccagaggaggagaatggcgcttcatgtccgtggtggggctcactct
tccagaagggggtttggagccaacaggaggggcttgctacgaggaggttcttcccacaga
ggaagcaggggagctctcatgagacatggatcttcctcagccttcaagttgaagagaggg
atggccatgagggagagtggacggagagggaggggggttcggctccgaggtggctccagg
atgcagagaagaggggaggaatctgatgagtcggaggatgaggaagacgatgatgacgaa
gaggaagagattgacagtgacgatggtggtaaagatcgatatcggcgacgcagaagacgg
aggaccgatgacctggatgacgacggtgatgacgacgaggaagaagaggacgacgacgag
agcgaggggcaggagtttgaccctgaagatgagatggacatggtggaagatgatgatgag
gagatggatgaagacgaagaaggcctctgggattcagaccgagaacctcctgtcctgttg
atgtctgatctgaacgatgacctgctgagtggttcttacctcactgttactctgcagcgg
cccgacaaggccaagaagcagaccggctccatagttccaaaactggaggcagcaatgggt
ccaaggatgcctgcagggggttctggtccacagcttggtttcattcagaggaagacagct
ctgtccaaacatggaccagccaggtttagtgatggtccgactgatggcctgacgccaaga
ggacctggcaggccacgtggctgtcatggcgacagaggccgaaaggatttctcggcatcc
tcgtcagaggaagaggaaagtgtcgcgccgtcactgtctctgctgtcgttgccctcgttc
aaggatgtgggtaatgacagtggaggcgaaaaggaagtgtgggtttctgttttcacctac
ctgaacagagccgagctgctggcgtgcatgactgtatgtaaggcttggtacaagtggagc
tgtgacaagcgcctgtggagccacatcgatgtgagtcgctgtagtccactcagcaaccaa
gccctggcaggcataatcaagcgccagccctactccctggacctgtcctggaccccactg
gcaaagaggcaactcaactgtttacttactcggctgcctggtctaagggagctcagagtg
gccggtctggcctggtcttgtctgtcggctctcgtctctccaaccctgccctgtctgcag
cttctggacctgcgctggtgcgaaggcattaaagacgcacagattaaggatctgataatg
cctccagattccgagtcatcccgtagccgacttagaaatttggtgacactgcgtctgtct
ggtttggacatcagtgagtccatccttaagctattgcaacgccacatgacgcaactggag
aggttggagctgtctcactgtaaaaatatcaccgactcatccgtcgcccttctggcagcc
ccggggacaaacacccgcaacaacctgactgaactcacactggccgggtgcggcgagctg
acggactactgcctttcatacatgaagcgcctgtcttctttgactctgttagacctgcgt
ggatgcaggaacgtcagcagacgagcgtgcgacgccttcattgccgatttgtcccacatc
accctctactgcatgatggaagagaagctgatccagcgaatagactga
DBGET
integrated database retrieval system
