Takifugu flavidus (sansaifugu): 130527853
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Entry
130527853 CDS
T09160
Symbol
nthl1
Name
(RefSeq) endonuclease III-like protein 1 isoform X1
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
130527853 (nthl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tfs03400
]
130527853 (nthl1)
Enzymes [BR:
tfs01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
130527853 (nthl1)
DNA repair and recombination proteins [BR:
tfs03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
130527853 (nthl1)
Prokaryotic type
130527853 (nthl1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
MMTV_SAg
RecR_HhH
Motif
Other DBs
NCBI-GeneID:
130527853
NCBI-ProteinID:
XP_056892617
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All DBs
Position
6:12533433..12536057
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AA seq
436 aa
AA seq
DB search
MTSHYFAQSRSVVTRRGAQNAAHKPGTSLKSKLTIKPEKDDLVSSSAVVKLEEEEAKISG
GGCGLHRTCLVVHLSITVYNSGMYTRSISTFCLANLHCKHVLCFASGADSGNALKPETDA
PTLSSHSRRRRQLKVEYDKDGSMPRLKTEHWEPPRWKTQLENIRAMRSGRDAPVDNMGAD
KCHDADAPAHVKRFQVLVSLMLSSQTKDQVTSAAMQKLRAHGCTVENILATNDETLGQLI
YPVGFWRNKVKYLKLTSAMLQKEFGGDIPDSVEGLVRLPGVGPKMAHLAMDIAWDQVSGI
GVDTHVHRISNRLGWLKKPTKTPEETRKSLEEWLPRELWSEINWLLVGFGQQVCLPVSPL
CSVCLNQHDCPSAHKNSPVRRPKVRSPRSQSPTSPFKTKAEPEPAGKYGGRTRAKKEPSP
APLSPAPQRRRPKRQK
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgacgtctcattatttcgcgcaaagcagatctgttgtcactcgaagaggggctcaaaat
gctgcccataaacctggaacctcgctcaagtccaaactcaccattaagcccgagaaagac
gatctggtttcttcttctgcggtagtgaaactggaggaggaggaggcgaagatctcaggt
ggaggctgtggcctccatagaacttgtctggttgtccatttgtcaatcactgtatataac
agtggaatgtataccagatcgataagcactttttgtcttgcaaatctgcactgtaaacat
gtgttgtgctttgcttctggtgctgattcaggtaatgcactgaaaccagaaacggacgct
ccaaccctgtcctcgcacagtcgcaggaggagacagctgaaagtggaatatgacaaagat
gggagcatgccacggctaaagacggagcactgggaacctccacgctggaagacacaacta
gaaaacattcgagccatgagaagcggccgtgatgcccctgtagataacatgggagcagat
aaatgccacgatgcagacgctcctgcacatgtcaagcgtttccaggtcttggtctctcta
atgttgtccagtcaaactaaagaccaggtgacatcggcagctatgcagaaactccgagct
catggctgcacggtggaaaatattcttgccactaatgacgaaacacttggacaactcatt
taccctgttggcttttggaggaataaagtgaagtacctgaagctgacatcagcaatgctg
cagaaagaatttggaggggacatcccagacagtgtggaagggctggtccggcttccagga
gtggggcccaagatggctcatttggccatggacatcgcctgggaccaggtgtctggcatt
ggcgtggacacgcatgttcatcgcatctccaaccgactcggctggctcaagaaaccaaca
aagactccggaggaaacgcggaaatctctggaagagtggctccccagggagctgtggagc
gaaatcaactggctgctcgtgggtttcggacaacaggtctgtcttcctgtcagccctctg
tgctctgtgtgtctcaaccagcacgactgcccttccgcccacaaaaactcacctgtaagg
aggcctaaagtcagatccccccggtcccagagtccgacatcaccatttaaaacaaaagct
gaacctgaaccagctgggaaatacggtggaagaacgagggcaaaaaaagagccatcgcca
gcccctctttcccccgctcctcagaggaggaggccaaaaaggcaaaaatag
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