Takifugu flavidus (sansaifugu): 130530016
Help
Entry
130530016 CDS
T09160
Symbol
plxnd1
Name
(RefSeq) LOW QUALITY PROTEIN: plexin-D1
KO
K06822
plexin D
Organism
tfs
Takifugu flavidus (sansaifugu)
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
130530016 (plxnd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plexin_cytopl
Plexin_RBD
TIG
Sema
PSI
PSI_PlexinA-B
TIG_plexin
Motif
Other DBs
NCBI-GeneID:
130530016
NCBI-ProteinID:
XP_056896805
LinkDB
All DBs
Position
8:11526593..11580257
Genome browser
AA seq
1902 aa
AA seq
DB search
MPPSIEIAVLILGVLVLEARRSASALHIQQAFPSPTQTNNFAVDPNSRKVYLATVNTIYQ
LNGTLSAEVEMRTGPVEDNLLCHAPQLPQAPCEHPKSLTDNYNKLLELDREQGVVVVCGS
VYQGFCELRKMENISQIAVEFPPQGEKTVFPSMLNIAANHPNASTVGLIFKSGGNTRLLV
GATYTGAGTQFFPKNHSKEDLRFENTPEIAIRSLNVKDLPRLFTYDINPSEDNVFKIKQE
VKSKNKLNFVHAFTQKTYSYIAFNNDAKMGHKESQPNSILARICLDTENPRKPSGPESRK
LTESYIQMPLQCGFNGNIYNRLLSVYPADIPTEDGREPESHLFGVFSKGDRKSALCAFKF
SDIEEEIRQGREKCSNSPSSDVQVLDSVIQGSGAACVQKGKLTLQLEQLNCGAAHLQHPL
ALRRPLRALPLVEYPALTSVSVDCVHNHTVVFLGTSNGRLRKLTFLANMTLANQWTLKLP
ASEAVHHLMTFDPSDSNYLYLMTSHHMLRVKVAQCDQWRSCGDCLGARDAHCGWCTLENR
CSIQKECALGLLARSWISMGEGPQQCPSMTLTPPEISVSADIKDVGILINGSVPDLLGSR
VECEYGPGVSTSATVHLDSGPAQIQTCPLLPRENYQSILPDTDHQAVSVAIKVNGTSVVS
GSFIIYDCERTGAIHPKTSCVSCLSARWKCYWDQENHLCVSNKDESNLHLIESATSCPSL
LASEVPPAPSGTAQDFTLSLRNVQEGEELECDFGTEQRYEATWVNSSVVKCSGITLFTYH
RSQIYHLNLRRKRFYSGRGEDVFVDSPQPVKVEVYNCKVGSSDCSQCWGREDQGHLCGWC
ENSCKPRDDCQPIVEQCPSPEIHKIFPLRGPVEGGTLLTVQGRNLGRRAEAVKVSIGDVP
CSLLPDRYTVSLELVCITGWSADEKTDIVQVDVEQSGTGTSKESFSYLLPKLLYMEPNKG
YHAGGTXVTITGEHLDIGSQVRVMVNSTHECVITEKTDNVIECTMPAVTQAHVSSVSVCV
EFENLPCQRDDLSTTYTYKKNPTIFFIEPTKSYLSGGRTITVTGQGFDLVQSAVMQVEGI
GQTMCSVISNSTIHCPSHSSSESQQTSVRFFLNGVLYTDESSSSSDSEEEEDEEGEDGDP
NKDHFLLEYVEDPQFFTANKEKLIKHHPGEPLTLIINKGPSDLDLVPEEYSVMIGSYPCN
ISFHNDQLFHCTINGLLGSSERELPVTVQVGNFRHIIAKVQLGGSELAIVVSIVVCCVLL
LLCTVALVVYCTKSRRAERYWQKTLLQMEEMESQIREEIRKGFAELQTDMTDLTKELNRS
QGIPFLEYKQFVTRTFFPKMCSDYEKSLVLHAYENDGMGPRALPETHPLLQDWQATNTTK
PNVEEGITLFSTLLNNKHFLVTFVHALEQQKDFAVRDRCSLASLLTIALHGKLEYYTSIM
KDLLVDLIDASASKNPKLMLRRTESVVEKMLTNWMSICMYSYLKETVGEPFFLLLCAIKQ
QINKGSIDAITGKARYTLNEEWLLRENVEARPQNINVSFQGCGMDSLSVRVMHTDTICQV
KEKTIEAFYKNLPFSQWPRAEDVDLEWLDSGGNSKLLQDLDNSSVMEDGRKKLNTVFHYQ
IPEGASLAMSLKDKKENTLGRVKDLDTEKYVHLVLPHDELMETRKSHRHSHRKKVLPEIY
LTRLLSTKGTLQKFLDDLFQAILSIPPDRPPLAVKYFFDFLEEQADKRGITDPDTLHIWK
TNSLPLRFWVNILKNPQFVFDIEKTDHMDACLSVIAQAFIDACSISDLQLGKDSPTNKLL
YAKEIPEYKKRVQLYYQQIQEMSPLSEQEMNAHLAEESRKYRNEFNTNLALTEIYKYAKR
YRNQVVSALESNPTARRTQLHHKFEQVIALVEDNIYECCSEA
NT seq
5709 nt
NT seq
+upstream
nt +downstream
nt
atgcctccttcgatagagatagctgttctgatcctcggcgtcttggttttggaggcgcgc
aggagtgccagcgcgctgcacatccaacaggctttcccgtctccaactcagaccaataat
tttgccgtggacccgaattctaggaaggtctacctggccaccgtcaacaccatctaccag
ctgaacggcaccttgagtgcggaggtggagatgaggaccgggccggtggaggacaacctg
ttgtgccatgcgccacagctgcctcaagctccgtgcgagcatcccaaatccctcacggac
aattacaacaagctcctggagctggacagagagcaaggggtcgtggtggtgtgtggctcc
gtgtaccaaggcttctgtgagctccggaaaatggagaacatttcgcagatagcggtggag
tttccaccccagggtgagaaaacagttttccccagcatgctcaatattgctgccaatcac
ccgaatgcatccacggtggggctcatcttcaagagcggaggaaacacccggcttctcgtc
ggggccacttacacaggggcgggtacccaatttttcccaaagaaccacagcaaggaggat
ctgcgctttgagaacactccggagatcgcgatccgctccctgaacgtcaaggatttaccc
cgacttttcacctatgacatcaacccttccgaggataacgtgtttaagatcaaacaggag
gttaaaagcaaaaacaagctgaacttcgtgcacgccttcacccagaagacttattcttat
atcgcctttaataatgacgccaaaatgggccacaaggagagtcagcccaacagcatcctc
gccaggatctgtctggataccgagaacccccggaaaccttcgggaccggagagcaggaag
ctcacggaatcctacatccagatgcccctgcagtgtggatttaacggtaatatttacaac
cggcttctgtccgtgtaccccgcggatatcccgacagaagacgggagagagcccgagtcg
catctgttcggagtcttttccaagggggacagaaagtccgccctgtgcgccttcaagttc
agtgacatcgaagaggagatccgccagggccgcgagaagtgctccaattctcccagcagc
gatgttcaggtgctggacagcgttatccagggctccggggccgcctgtgtgcagaagggg
aaactgacgttgcagctcgagcagctgaactgcggtgctgcccacctgcagcatcctctg
gccttacggaggcctttgagggccctccctctggtggagtacccggctctcacgtccgtc
tccgtggactgcgttcacaatcacactgtggttttcctgggaaccagtaatggccgactt
cgtaagctcaccttcttggcgaacatgaccttggccaaccagtggacgctcaagctgcca
gccagtgaggcggtccaccacctcatgacctttgaccccagtgacagcaactacctttat
ctcatgacctctcaccatatgctgagggtgaaagtggcccagtgtgaccagtggaggagc
tgcggtgactgtctgggagccagggatgcccactgtggctggtgtaccctggagaatcga
tgctccatccagaaggagtgtgccctggggctgctggcaaggtcctggatcagcatgggt
gaaggcccccagcagtgtccgtccatgacgctgactccaccagagatcagcgtctccgca
gacattaaggatgttggcattttgataaacggcagcgttcctgatctgctgggctcccgg
gtggagtgcgagtacgggccgggtgtttctacatctgccaccgtgcacctggactccggc
ccagctcagatccagacctgtcccctgctccctcgagagaattaccaatcaatccttccc
gacacggatcatcaggcggtttcagtggcgataaaagtgaatggcacgtctgtggtatct
gggagcttcatcatctacgactgtgagcggacaggagcgatacaccccaagacatcatgc
gtgagctgcctgagcgccagatggaagtgttactgggaccaagaaaaccatctctgtgtc
tctaataaagacgaatcaaacctccacctgatagagagcgccacttcctgccccagcctg
ctggcctcagaggttcctccggcaccatcaggaacggcgcaggacttcactctatccctc
aggaacgtccaggagggggaggagctggagtgcgactttgggaccgagcagcgatacgag
gccacgtgggtgaacagctccgttgtcaagtgcagcggaataacactcttcacatatcac
aggagtcagatttaccacctcaacctgaggaggaagcgattctacagcggacgtggcgag
gatgtatttgtcgacagccctcaacccgtgaaagtggaggtctacaactgtaaagttggc
agttcagactgttcccaatgctggggcagggaggatcagggacacctctgtggctggtgt
gaaaacagctgtaagccacgggacgactgccagccgatcgtggagcagtgtccgtccccc
gagatccataagattttccctctgaggggtccggtcgaaggaggcaccctactgacagta
caaggcagaaacctgggccggagggcagaagcagtaaaggtctccattggagacgtgccg
tgttcgctgctgcctgatcgttacaccgtctccctggagctggtgtgcatcaccgggtgg
tctgcagacgaaaagacggatattgtccaagtggacgtggaacagagcgggacggggaca
tcgaaggagagcttctcctacttactcccaaagctgctgtacatggagcctaacaaaggt
tatcatgctggaggaactnaagtgaccatcactggggagcacttggatattggctctcag
gtcagggtcatggtcaacagcacacacgagtgtgtcattacagagaaaacagataatgtc
attgaatgcaccatgccggcagtcacgcaagcccatgtctcctctgtgagtgtgtgtgtg
gagtttgaaaacctcccctgccaaagagatgatcttagcaccacctacacctacaagaag
aaccccaccatcttcttcatcgaacccaccaagagctacctcagtggtggccggaccatc
accgtgacggggcagggattcgatctggtgcagagcgccgtcatgcaggtggagggaatc
ggacaaacgatgtgcagcgtgatctccaactccaccatccattgtccgtcccactcttcc
agcgagtcccagcagacctcggtgcggttcttcctgaacggggtcctctacacagacgag
agctcctcgtcttcggacagcgaggaagaggaagatgaagaaggagaagatggcgaccct
aataaggatcacttcctgctggaatatgtggaggaccctcagtttttcactgccaacaag
gagaagctgattaaacatcaccctggagagccactgactctcattatcaacaaagggccg
agcgatctggacctggtaccagaagaatactcggtgatgattggctcgtatccctgtaac
atcagctttcataatgaccagctgttccactgcactatcaatggactgctgggctccagc
gagagagagctgccagtcaccgtccaagtggggaactttcgtcacatcattgccaaagtg
cagctcgggggcagtgaactagccatcgtggtgtccattgtggtgtgctgcgtgctgctg
ttgctgtgcactgtggctcttgttgtgtactgcacaaagagccgaagggcggaacgctac
tggcagaaaacgctgcttcagatggaggagatggagtcccagatcagagaggagatccgt
aaaggctttgcagagctgcagacggacatgactgacctgaccaaggagctgaatcgcagc
cagggcatcccctttttagagtacaaacaatttgtcactcgcacattcttccctaagatg
tgttctgattatgagaagagtctggtcctgcacgcctacgagaacgatggcatgggtcct
cgagccttgccagagacacacccgctgctacaggactggcaggccaccaacacaacaaag
cccaacgttgaggagggaatcactctgttctccactcttctcaacaacaagcacttcctg
gtcacgttcgtccacgccctggagcagcagaaggacttcgctgtacgggacagatgcagc
ctggcatccctgctgacgatcgccctccatgggaagttggaatactacaccagcataatg
aaagacctgctggtggacctgattgacgcgtcggcttccaagaaccccaaactgatgttg
cgtcggactgagtctgtagtggagaagatgctgacaaactggatgtctatctgcatgtac
agctacctcaaggaaactgtgggcgagcctttcttccttctgctgtgtgcaatcaagcag
cagatcaacaagggctccatcgatgccattacgggaaaggcgcgctacacactcaatgag
gagtggctgcttcgtgagaatgttgaggctaggccacagaacatcaacgtgtccttccag
ggctgtggcatggactccctgtctgtcagagtcatgcacactgacacaatctgccaggtg
aaggagaaaaccatagaggccttttataaaaatctgcctttctctcagtggccccgagca
gaagatgtagacctggagtggcttgactcaggtggcaacagcaagcttctgcaagacctg
gataactcctcagtgatggaagacggcaggaagaagctcaacacagtcttccattaccag
atcccggagggggcatcgctggctatgagcttgaaagacaagaaagagaacaccctgggg
agagttaaagatctggatacagagaagtatgtgcacctggttttacctcacgatgagtta
atggagacgaggaagtctcacaggcacagccaccgcaagaaggtcctgcccgaaatctac
ctgacacgtctgctgtcaaccaagggaactcttcagaagttcttggatgacctctttcag
gccatcctcagcatccctccggaccgccctcccctggctgtcaaatacttctttgacttc
ctggaggagcaggcagacaaacggggcatcacagacccagacaccctgcacatctggaag
accaacagtttacctctacgattctgggtgaacatcctgaagaacccccagtttgtattc
gacatagagaagacggatcacatggacgcctgcctttctgtcatcgcccaggccttcatc
gacgcctgttccatctctgacctgcagcttggcaaggactccccgacaaacaagctgctt
tatgctaaggagatccccgagtacaagaagagagtgcagttgtactaccagcagatacag
gaaatgtctcctctcagcgagcaggagatgaacgctcaccttgccgaggagtcacggaaa
tacagaaatgaattcaacaccaacctggccttgacggaaatctacaaatatgccaaaaga
tacagaaaccaggtggtgagtgctctggagtcaaaccccactgcacggcgcactcagctg
caccacaagttcgagcaggtcattgctcttgtggaggacaacatctacgagtgctgcagc
gaggcctga
DBGET
integrated database retrieval system
