Takifugu flavidus (sansaifugu): 130530588
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Entry
130530588 CDS
T09160
Name
(RefSeq) plakophilin-1 isoform X1
KO
K10387
plakophilin 1
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs04382
Cornified envelope formation
tfs04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
130530588
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
130530588
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tfs04812
]
130530588
Cytoskeleton proteins [BR:
tfs04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
130530588
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
HEAT
HEAT_MROH2B_C
Atx10homo_assoc
WHD_PriA
Motif
Other DBs
NCBI-GeneID:
130530588
NCBI-ProteinID:
XP_056897874
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All DBs
Position
8:complement(9375785..9385636)
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AA seq
727 aa
AA seq
DB search
MMAAEPFKSARINNSGEDTSLALPSDNNLRTGHQRVRDQVHSIKRSKSKPSGNGGMSPVS
PTGLSSQTWTGNEFNSFKYSPTKANGTLSRIASTTSAGSKSRHHSLISSSWREKHSSTSG
IRDHICIWPISPNGVKPSVSDPTLAPSFPAVSLPEVRAKGQSVKAQQSKYGQVNRHSSYT
ISNGSHTTTTKTHTVKSPTTQYQSEGKMGTIKVSQSEKPTVGSGTTTGVDLTLKEAVEYL
SHAEENYQQCGATFIHHASFKEEQAKQQVLNLGGIPVLVSLLRSPHPGVSQASAGALRNL
VFKHQCNKLEVQHCGGIAKALQLLKETNSTETQKQITGLLWNMSSSDELKEELIATALPA
LTENVVVPFTCWSDSTNNNNIHPDVFYNATGCLRNLSCGKLKARQAMRDCRGLIDSLMSY
IQSCVAEEDPDDKDMKINLPVSSFCFHQSVENCVCILHNLTYQLESECPQCFQKYRPKTD
SESDAQKSPIGCFSPKSAKAQKEFSFDLTQMPEESTSSGVNWLCHPTAMQSYLSLLGLSQ
KDATLEASCGVLQNLTASKDVGSSAMSQILVQKLGALAHISPLLKSPNPSLQKNAVSLLG
NMARTSCLQTTMAKQVLPDLTSLLSLSTREMGNSDDAIASVCGAARTLMLADTELSKKIV
TKELVSGLADLSENGSFPKGSKAASLLLYSLWNDKNLQAAVKKLGIGKSLFINDNTTAVH
RSMQVID
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgatggccgcggagccgttcaagtccgcgcggatcaacaacagcggcgaggacacgtcg
ctcgcgctgccctcggacaacaacctgcgcacgggacatcagcgcgtgagggatcaggtg
cacagcatcaaaaggagcaagtccaaaccgagcgggaacggcgggatgtcgcctgtgtca
ccgaccggactcagttcccagacttggacaggaaatgaattcaactcatttaaatactct
ccaactaaggcaaatggaaccttgagccgtatcgcctccaccacttcagcaggcagcaaa
tcgagacatcacagtctaatcagcagttcctggagagaaaaacattccagcacttcaggc
atacgggaccatatttgtatttggcccattagtcccaatggagtgaaaccaagtgtcagt
gaccctaccttggctccttcgtttcctgctgtttctttgcctgaagtgcgagccaaaggg
cagagcgttaaagcccagcagtctaagtatggtcaagttaatcgacacagtagctacacc
atcagcaatggatctcacacaaccaccacaaagacgcacactgtcaagtctcctaccacc
cagtatcaaagcgagggcaagatgggcaccatcaaagtgtctcagtccgagaagccaaca
gtggggagcggtaccacaaccggtgtagacctgaccttgaaagaggctgttgagtaccta
tctcatgctgaagagaactaccaacagtgcggagccaccttcatccatcatgcttctttt
aaagaggagcaggccaaacagcaggttttgaatttgggaggcatccctgttcttgtgtct
ctgctgcggagtcctcaccctggggtgagccaggcctctgctggggccttgaggaacctg
gtgttcaagcaccaatgtaacaagctggaggttcagcactgtggtggtatagctaaagcc
ctacaactactgaaagagacaaattccactgagacccagaaacagatcactggcctgctg
tggaacatgtcgtcttctgatgagctcaaagaggaacttatagcgacagcgcttcccgcc
ctgaccgaaaacgtggtggtgccatttacctgctggtcagacagtaccaacaacaacaac
atacaccctgatgtcttctacaatgccacagggtgcctgcggaacctgagctgtggcaaa
ctgaaagccagacaggccatgagagattgccgtggcctcatcgactccctcatgagttac
atccagtcctgcgttgcagaggaagaccccgatgacaaggatatgaaaataaatcttccg
gtctcttccttttgtttccaccagtctgtggaaaactgtgtatgcattcttcataacctg
acgtaccagctggagtctgagtgtccccagtgtttccagaagtaccgaccaaagactgat
tccgaatccgatgcgcagaaaagccccatcggttgcttcagtccaaaaagcgccaaggct
cagaaagagttttcctttgacctgacccagatgccagaagaaagtacatcatctggtgtg
aactggttgtgccacccaacggcgatgcagtcctacctgagtctgctcggcttgtcccag
aaagatgcgaccctggaagcttcctgcggtgtcctgcagaacctcactgccagcaaggat
gtgggatccagcgccatgtcccagattttggttcaaaagttgggggctctggctcacatt
tcacctcttctaaagtctcctaaccccagcctgcagaagaatgctgtgtcgttgctgggt
aacatggctcgaaccagctgtcttcagaccacaatggcgaagcaggtactgcctgatctc
accagcctgctctccctgagcactcgggagatgggaaactctgacgatgccatagcatca
gtgtgcggcgctgcacgaactctgatgttggccgacactgagctcagcaagaagatagtt
acaaaagagctggtgtcagggctggctgacctcagtgagaatggttccttcccaaaaggc
agcaaagcagcgtccctgctcctctacagcttgtggaatgataagaatttacaagctgct
gtaaaaaagctggggattgggaaatcacttttcatcaatgacaacacaacagccgtccac
agatcgatgcaagttatcgattga
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