KEGG   Takifugu flavidus (sansaifugu): 130531204
Entry
130531204         CDS       T09160                                 
Name
(RefSeq) breast cancer type 1 susceptibility protein homolog isoform X1
  KO
K10605  breast cancer type 1 susceptibility protein [EC:2.3.2.27]
Organism
tfs  Takifugu flavidus (sansaifugu)
Pathway
tfs03440  Homologous recombination
tfs03460  Fanconi anemia pathway
tfs04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:tfs00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    130531204
  09124 Replication and repair
   03440 Homologous recombination
    130531204
   03460 Fanconi anemia pathway
    130531204
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:tfs01009]
    130531204
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tfs04121]
    130531204
   03036 Chromosome and associated proteins [BR:tfs03036]
    130531204
   03400 DNA repair and recombination proteins [BR:tfs03400]
    130531204
Enzymes [BR:tfs01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     130531204
Protein phosphatases and associated proteins [BR:tfs01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     130531204
Ubiquitin system [BR:tfs04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    130531204
  Multi subunit type E3
   BRCC complex
    130531204
Chromosome and associated proteins [BR:tfs03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     130531204
DNA repair and recombination proteins [BR:tfs03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    BRCA1-core complex
     130531204
    BRCA1-A complex
     130531204
    BRCA1-B complex
     130531204
    BRCA1-C complex
     130531204
    BRCA complex
     130531204
   FA (Fanconi anemia) pathway
    Downstream FA components
     130531204
SSDB
Motif
Pfam: BRCT zf-C3HC4 BRCT_2 zf-C3HC4_4 zf-C3HC4_2 RING_XB3-XBAT31 RTT107_BRCT_5 zf-C3HC4_3 zf-RING_2 zf-RING_UBOX zf-Nse zf-RING_6 zf-RING_5 zf-RING_4 zf-MIZ zf-ANAPC11 TRAF3_RING PTCB-BRCT YicC-like_C zf-RING_10 Sina_RING RING_ZNF598
Other DBs
NCBI-GeneID: 130531204
NCBI-ProteinID: XP_056899061
LinkDB
Position
1:23196411..23212966
AA seq 1315 aa
MLNKGEEDFSCGKTEACHFWNCTLHLRENKDIKIITMEAAKAADVKKGISVLWESLQCPI
CLDILTAPVSTKCDHQFCKFCISKLLSNTKQNKANCPVCKSKITKRSLQESPKFQRLVTG
LQGMILAYENDTGTNYFTGLSRQTQQPHVADIKNAQHHKEQSDENASRMEDDNEDLPKSY
SSTRAAQDGFARLMGLEDTSPLTTEIDGLDSGLGEAPPTCDKKMYSPRKLEKVSFQPALI
PDKDEHPHLQTPSKKKHKKVLEPDKILDQKQKKSLEKVAEWLMKVPSEQSLELENLDEDG
DDSDSCSSTSTIDLGLLHCESNPMRARGKALEDQVFGAIYKRQRRGKGIVKPIEAALEMV
CLNHSDKNTSEDKSREDKEEVHSIRAQEQNTSSNILKEEIAVLEDCGGIVEPTHMSENDQ
NNKDEVPHLVSDIGQQQPETIAKRTRSSLQQVDCDLLKCTQKKPEDSGKKKIAQRGSKGI
KSEKSKSARMSKPLVLVTVEKLDTSPKIRPQSEKVEVHIENYPSSGDQEVPLGRCTRKSR
RLQVFTKEDDKKETSRFNVPEKQHNSKYPNFECEILDNIKSQNCKYQTQQANRNGCIYNQ
GIQEIENMDSGERASSLRSEEDTKTSLSEVQNTEILSETPRCVAVFPSCAELAPAEPTNQ
PPNTVQLVTELAEKEREQQNDSEQDTEQLVRSFKATKRKSFHLGTGPNMKRSHLLVHENT
QSPGTEENENYYESLPKQVQPVMAKITNSQVLIDSQNMSGSDLISPSCSPSLTRKALGLQ
SRCSVEVGNCVLGNSASSPLSPNNESKHVVQSSSPLILTKGNSTICFATEKPSQISESKT
DFIMMKETRGNTSLHSFNGSTAEELLDAQSSLTPDGLGMPVPEVTYSQGSRELSRCRKRT
KSQKLDSSSDCTEEEFPCFSKILNKTAPPGANPPASPSLDCVNSSQASVDLFDMPNECAI
NNVESSQFSSEVLVTQQKIEMKKELVRLEKLMALVTEVLHEKETSPAKNIQNKTNLSSKI
TGSDADKLRPNVQDEDFNQETFPEEALEPNTRYSDAPPSGSKHSRTTEMNSRTSNTVGLS
SAAKTDGSPSAGHEDKENNKPEGDRSQAKMLLVTSGLGASEQITVKKFAKRIGAVVVSQV
TPEVTHIVMHTDEQLVCERTLKYFLGIAGRKWVVSFQWISECFKQKKLLNESSFEVRGDV
VNGSNHQGPMKARTTGDNNLLMKDFNICFQGPFTDMTTAEMELMVELCGATVVKDPLLLH
SKPTHHQLIIVQSGSESYKSLSRKATVVTRGWLLDTVATYTIQNFRTYRADLRAA
NT seq 3948 nt   +upstreamnt  +downstreamnt
atgttgaataaaggagaagaagattttagttgcgggaaaactgaagcttgtcatttctgg
aattgtacgcttcatctacgagaaaataaggacattaaaataatcaccatggaagcagca
aaagccgcagatgttaagaaagggatttcagtgctttgggagagtctacagtgtccaata
tgcttggatatattgactgcacctgtatctaccaagtgtgaccatcaattttgcaaattc
tgtatctcgaaacttttaagcaacaccaaacaaaacaaggctaactgtccagtatgcaaa
tccaagataaccaaaaggagcttacaagagagccctaagtttcaaagacttgtcacagga
ttacagggaatgattctggcatatgaaaatgacacaggcacaaactattttactgggctg
tccaggcaaacacagcaaccacatgttgcagatatcaaaaatgctcaacatcataaggaa
caatcagatgaaaatgcttcccgtatggaagatgataatgaagatcttccaaagtcttat
tcttcaactagagcagcccaggatggatttgcaaggcttatgggcctagaagacacaagt
cctctgactacagaaatcgatggcctggacagtggtcttggagaggccccgccaacttgt
gacaaaaaaatgtacagcccaagaaagttggagaaggtttcctttcagccagcattaatt
ccagataaggatgaacacccacatttacaaacaccttcaaagaagaagcataaaaaggtt
ttagagcctgataagattctcgatcagaaacagaagaaaagtctagagaaagttgcagag
tggctcatgaaagttccatccgagcaaagcctggaattggagaacctggatgaagatggc
gatgactctgacagctgctcatccacctcaacaatagatcttgggctactccactgtgaa
tcaaatcctatgagagctcgtggaaaagccctggaagatcaggtgtttggggcgatttat
aaaagacagcgaagagggaagggaatcgtaaaaccgatagaagcggcactcgaaatggtt
tgtttaaatcattctgacaaaaatacctctgaagataaaagcagagaagataaggaagag
gtgcactcgataagagcgcaagaacaaaacaccagtagcaacatattaaaagaagagatt
gcagtcttggaggattgtggaggaatcgttgagccaactcacatgtcagaaaatgatcaa
aacaacaaagatgaagtacctcatctagtttctgatattggacaacagcaaccagaaacc
attgcaaagagaacacggtcttctctgcagcaagtcgactgtgatttgttgaagtgcaca
caaaaaaagccagaagatagtgggaaaaagaaaatcgcccagagaggaagtaaaggcatc
aagtctgaaaaatcaaagtctgccagaatgtcaaaaccgcttgttttggttacggttgaa
aagctagacactagtcccaagattagaccgcagtcagaaaaagttgaagttcacattgaa
aactatcccagcagtggtgaccaagaagttcctttagggagatgtaccaggaaaagtaga
agacttcaggtcttcactaaggaagatgacaagaaagaaacatcaagattcaatgtccca
gaaaaacaacacaattcaaaataccccaactttgaatgtgaaatactggataatatcaaa
tcacaaaattgtaaataccaaacacaacaagcaaacagaaatggatgtatttataatcaa
ggtatccaagaaatagaaaacatggattctggtgagagagcatcttctttgagatcagaa
gaagatactaaaacttctctttctgaagtccaaaatactgaaattttgtctgaaactcct
cgctgcgtcgctgtgttcccaagttgtgctgaactagctccggcagaaccaactaatcaa
cccccaaatactgtccagttggtgactgaactcgctgaaaaggaacgcgagcaacagaac
gatagtgagcaggacacagaacagttggtcaggagctttaaagctactaaaagaaaatct
ttccatctcggtactggtccaaatatgaaaaggagccatttattagttcatgaaaacacc
caaagtccaggaactgaagagaatgaaaattattatgaatctttgccaaaacaagtgcag
ccagtgatggctaaaataaccaacagtcaggttttaattgacagtcaaaacatgtctggt
agtgacttgatctcaccgtcctgctcacccagcctgacgagaaaagccttgggccttcaa
agtagatgttcagtggaagttggaaattgtgtcctcggtaatagtgccagtagccccctt
tctcctaataacgaatcgaagcatgtagtacaaagttcctctcctctcatactaacaaag
ggaaactcgacaatctgctttgcaactgaaaaaccttctcaaatttcagagagcaaaact
gattttataatgatgaaggagacacgaggtaatacttcactgcacagttttaatggcagc
actgctgaggaacttttagatgcacagtcgtcattaaccccggatggcctgggaatgcca
gtcccagaggtgacatacagccaagggagcagagagctcagcaggtgcaggaaaaggaca
aagtctcagaagctggactcttcatcagattgtacagaagaggaatttccatgtttttca
aaaatcctcaacaaaactgccccccctggtgctaatcctccagcaagtcccagccttgat
tgtgttaattccagccaagcatctgtggacttgtttgacatgccaaatgagtgtgccata
aataatgtcgagtcatctcaattttcaagcgaggtccttgttacgcagcaaaaaatagag
atgaagaaggagctggtgaggttggaaaagttgatggcactggtgacagaggtgctacac
gagaaggaaaccagcccagcaaaaaacatccagaataaaaccaacctgagcagcaaaata
acaggctcagatgctgacaaactgcgcccgaatgtccaggatgaagattttaaccaagaa
acattcccagaagaagcactagaacccaacacaagatattctgatgcgcctccttctggt
tccaagcacagcaggacgacagagatgaactccagaacatccaacacagttgggttaagt
tcagctgcaaagactgatggttccccatcagccggccacgaagacaaagaaaataacaag
cctgagggagacagaagccaagccaagatgctcctggtgacgtctggactgggcgccagt
gaacagataacagtgaaaaagttcgctaagcggattggcgccgttgtggtctcccaggtg
acaccagaggtgactcacattgtcatgcacacagatgaacaactggtgtgtgagcgcaca
ctgaagtactttcttggaattgcgggccggaagtgggtggtgagcttccaatggatttcg
gagtgcttcaaacaaaagaaacttttaaatgagagttcctttgaagtgagaggtgacgta
gttaatggatccaaccaccagggcccaatgaaagctcgaacaacaggagacaacaatttg
ctgatgaaagacttcaatatctgttttcaggggccttttacagacatgaccacagctgaa
atggagttgatggttgagctgtgtggagcgactgttgtcaaagatccacttctgctccac
agtaaaccgactcatcatcagctgatcatcgttcagtccggatcagaatcctacaagagc
ctctctagaaaggctacagttgtgactcgggggtggctgttggacaccgtggcaacctac
accatccaaaacttcaggacctacagagctgacctgagagcagcctga

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