Takifugu flavidus (sansaifugu): 130531302
Help
Entry
130531302 CDS
T09160
Symbol
pdgfrb
Name
(RefSeq) platelet-derived growth factor receptor beta isoform X1
KO
K05089
platelet-derived growth factor receptor beta [EC:
2.7.10.1
]
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs04010
MAPK signaling pathway
tfs04020
Calcium signaling pathway
tfs04510
Focal adhesion
tfs04540
Gap junction
tfs04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
130531302 (pdgfrb)
04020 Calcium signaling pathway
130531302 (pdgfrb)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
130531302 (pdgfrb)
04540 Gap junction
130531302 (pdgfrb)
09142 Cell motility
04810 Regulation of actin cytoskeleton
130531302 (pdgfrb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
tfs01001
]
130531302 (pdgfrb)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
tfs04090
]
130531302 (pdgfrb)
Enzymes [BR:
tfs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
130531302 (pdgfrb)
Protein kinases [BR:
tfs01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
130531302 (pdgfrb)
CD molecules [BR:
tfs04090
]
Proteins
130531302 (pdgfrb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
Ig_2
ig
V-set
C2-set_2
Ig_6
PKD
Motif
Other DBs
NCBI-GeneID:
130531302
NCBI-ProteinID:
XP_056899225
LinkDB
All DBs
Position
9:42210..63328
Genome browser
AA seq
1129 aa
AA seq
DB search
MFRRLGREVHRLLPPVDLCLSFLAGSSMLRASAMRAAVLHLTVALAALLSSCTTVSCLKI
VPEEKQLILAEGSSLSLTCAGSSETTWDLKSDDVPFFQMKAESSGLNYKIVQSNSTASVL
TLWHVDWKNTGVYQCREQLTGEIKEVAVFVPDPEVWFIESSHGMVTKTSGESTVPCVVTN
PNIMVTLYDKDTDLPVNGVYVPSEGFKAYLDYRTYVCRGELNGVVKESQAFNVYSIHVPE
DIDAYVNASQTVLKQGEPLTVNCTVQGVELVLFSWDIPNRDIVKHKPETVVLSATTMRSC
LVFPHATVAHSGTYVCHAHESTQDQKAFASVNITVLERGFVAVKSTQKQNITAELQENVE
LRVEIEAYPPPQIRWKKDGAPVRGDKTIIIRQEHEIRYVTILTLVRVRTEQKGLYTALIT
NEDDVKEVTFALEVQVLARIKDLTDHHLPGKKQLVTCVAEGVPTPTIQWYSCDSMLKCNN
QTSLWQQLKADPELLSIHTSVTEARRTNQVQSQVTFFKPQHTTVRCETTNQEGLIDFRDV
KLVSSSLFSQVVLLAVVLTLVPIIIMSIIILIAVWKKKPRYEIRWKVIESVSQDGHEYIY
VDPIHLPYDLAWEMPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSSIKVAVKMLKATAR
RSETQALMSELKIMSHLGPHLNIVNLLAACTKHGPLYLVTEYCRYGDLVDYLHRNKHTFL
QYYLDKNQDDGSLISGGSTPLSQRKGYVSFGSESDGGYMDMSKDEPAVYVPMQEQMDTIK
YADIQPSPYESPYQQDLYQEQGGGRVDLVISDSPALTYDDLLGFSYQVAKGMEFLASKNC
VHRDLAARNVLICEGKLVKICDFGLARDIMHDSNYISKGSTFLPLKWMAPESIFHNLYTT
LSDVWSYGILLWEIFTLGGTPYPDLPMNELFYSALKRGYRMAKPAHASDEVYEIMKRCWD
ETFEKRPDFSFLVHCVGDMLTDSYKKKYSQVNETFLKSDHPAVARTKPRLSSPFPIANPA
FGSPSLVGLSDFPDPYNQNTRHFRNEAEVQEGVTSFNEYIIPIPDPKPEEAFTDVPSESP
ESSLALEEETDSVHDSTDTLPEEDRLEETSERDALLGSSGTPEVEDSFL
NT seq
3390 nt
NT seq
+upstream
nt +downstream
nt
atgttcagaagattagggagagaagttcaccggctgctgccaccagtcgacctttgtttg
agctttttagcaggatccagcatgctgagggcttccgctatgagagcagctgtgctccac
ctgacagtcgcacttgcagctcttctgtcctcctgcaccactgtcagctgtctgaagatc
gtacctgaagagaaacagctcatcctggctgagggatcatccctgtccctcacctgcgcc
ggctcatcagagaccacctgggacttgaagagcgacgatgtgccgttcttccaaatgaag
gcagagagcagtggcctgaactacaaaattgtgcagagcaacagcacagccagcgttctg
acattatggcacgtggactggaagaacacgggggtttatcagtgcagagagcagctcact
ggagaaattaaagaagtggctgtttttgttccggaccctgaagtgtggttcattgaaagc
tcccacggcatggtcacgaagaccagcggtgaaagcacggtcccctgcgtggtcactaat
ccaaacatcatggtcaccctttatgacaaggacaccgatttgcccgtcaacggggtttat
gttcctagtgagggcttcaaggcatatctggactacaggacctatgtgtgtcggggagag
ctgaacggggtggtgaaagagtcccaggccttcaacgtctacagcattcacgtcccagag
gacatcgacgcctacgtgaatgcctcccagaccgtcctgaagcaaggcgaaccgctgaca
gtgaactgcacagtgcaaggagtggagctggtgcttttttcctgggatatccccaacaga
gacattgttaagcataagccggagaccgtggtcctctctgccacaaccatgcgctcctgc
ctggtctttcctcatgctacggtggcccacagtggaacctacgtctgccatgctcatgag
agcacccaggaccagaaggcctttgccagtgtcaacatcactgttctggagagaggcttt
gtggctgtgaaatctactcaaaaacaaaacatcaccgctgaactgcaggaaaacgttgag
ctgagagtggaaatcgaagcctaccctccccctcagatccgctggaagaaagacggtgcc
ccggtcaggggagacaaaaccatcataatcagacaagagcatgaaatcaggtatgtgacc
attctgaccctggtgagggtgaggacagagcaaaagggtctctacacggccctcatcaca
aatgaagatgatgtgaaggaggtgacctttgccctggaagtacaagttctcgctcggatt
aaagacctgacggaccaccacctccctgggaagaagcagttggtgacgtgtgtggccgag
ggggtcccgacccccaccatccagtggtacagctgcgacagcatgctgaagtgcaacaac
cagacgagcttgtggcagcagctcaaagcagatccagagctgctgagcatccacaccagc
gtcaccgaggcgcgtcggaccaaccaggtacagagccaagtgaccttctttaaaccccag
cacaccaccgtccgctgcgagactaccaaccaagaaggactcatcgacttcagggatgtc
aaactggtgtccagctctctgttctcccaggtggtgttgttggctgttgtcctgacgtta
gtgcccatcatcatcatgtccatcatcatcctcatcgctgtgtggaagaagaagccgcgc
tatgagatcagatggaaggtgatcgagtcggtgagccaggacggccacgagtacatctac
gtggaccccatccacctgccctatgacctggcctgggaaatgccacgagacaacctggtt
ctgggtcgcacgctcggatcaggagcctttggcagggtggtcgaggccaccgcgcacgga
ctctcgcattcccaatccagcattaaagtggcagtgaaaatgctgaaggctacggcccgg
aggagcgagacccaggctctgatgtcagaactgaagatcatgagtcacctggggcctcac
ctcaacattgtcaacttactggcagcttgcaccaaacatggacctctgtatctcgtcact
gagtattgtcgctatggtgacctggtggactacctgcacaggaacaagcacacctttttg
cagtactacctggacaaaaaccaagatgacggcagtctaatctcaggagggagtactccc
ctcagccagaggaaaggctatgtgtcttttggaagcgagagtgatggaggatacatggac
atgagtaaagacgagcctgcagtttacgttcccatgcaggagcagatggacaccatcaag
tatgcagacatccaaccgtctccgtacgagtcgccctaccagcaggacctctaccaagag
caaggtgggggcagggtggacctggtcatcagcgactctcctgctctgacttacgacgac
cttctgggcttcagctaccaggtggccaaagggatggagttccttgcctccaagaactgc
gtccatcgagacctcgcggcaagaaatgtgttgatctgtgagggcaaacttgtgaagatc
tgtgactttggcctggccagagacatcatgcatgactccaactacatctcaaaaggcagc
acattcctgcctttgaaatggatggcaccagaaagcatcttccataacctgtacacaacc
ctgagtgatgtgtggtcatacggcattcttctttgggagattttcacactgggaggaacg
ccgtacccggatctacccatgaatgagctgttctacagcgcgctgaagcgaggctaccga
atggccaagcccgctcacgcctctgacgaagtgtatgagatcatgaagaggtgctgggac
gagacgtttgagaagaggcccgacttttcctttctggttcactgtgtgggggatatgctg
acagacagctataaaaagaaatacagccaagtcaatgaaaccttcctgaagagcgaccac
cccgcagtggcacgcaccaaacctcgactctcctcgccttttccgatcgccaacccggcg
ttcggttccccttccctggtcggactctccgacttcccggatccttacaaccagaacacc
aggcacttcagaaacgaggcagaggttcaggagggggtgacctcctttaacgagtacatc
attcccatcccagaccccaaaccggaggaagctttcaccgacgtgccctcagaaagccct
gaaagctctttggctctggaggaggagaccgactctgtgcacgactccactgacacgctg
ccggaggaggacaggctggaggagaccagcgagagggacgcgctgctgggatcatctggg
acacctgaggttgaagacagcttcctgtag
DBGET
integrated database retrieval system
