KEGG   Takifugu flavidus (sansaifugu): 130533648
Entry
130533648         CDS       T09160                                 
Symbol
slit1a
Name
(RefSeq) slit homolog 1a isoform X1
  KO
K06838  slit 1
Organism
tfs  Takifugu flavidus (sansaifugu)
Brite
KEGG Orthology (KO) [BR:tfs00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:tfs00536]
    130533648 (slit1a)
Glycosaminoglycan binding proteins [BR:tfs00536]
 Heparan sulfate / Heparin
  Axon guidance molecules
   130533648 (slit1a)
SSDB
Motif
Pfam: LRR_8 LRR_4 LRR_5 EGF Laminin_G_2 LRRNT Laminin_G_1 hEGF LRR_1 LRRCT EGF_TEN LRR_9 LRR_14 LRR_EndoS EGF_Teneurin EGF_DL_JAG JAG1-like_EGF2 LRR_NXF1-5 Laminin_G_3 DUF5052
Other DBs
NCBI-GeneID: 130533648
NCBI-ProteinID: XP_056903209
LinkDB
Position
11:14105059..14169669
AA seq 1546 aa
MPLRGNRFGAFLCRQAGRPLWMWLVMLSALLMGNAGACPALCTCSGTTVDCHGLGLRTMP
RNIPRNAERLELNGNNLTRITKSDFAGLKYIRVLQLMENQITVIERGAFDDMKELERLRL
NRNQLQQLPELLFQKNPALSRLDLSENFIQSIPRKAFRGATDIKNLQLDKNHIGCIEDGA
FRAMRGLEVLTLNNNNISSIPVSSFNHMPKLRTFRLHSNNLHCDCHLAWLAQWLRQRPTV
GLFTQCTSPAELRGLNVAEVQKHEFSCSGHQESFATQACSVGGGSCPAMCTCSNNIVDCR
GKGLTAIPANLPESMAEIRLEQNGIKSVPPGAFSPYKKLRRIDLSNNQISEIAPDAFQGL
RSLNSLVLYGNKITDLPKGVFDGLYALQLLLLNANKIHCVRANAFQDLQNLSLLSLYDNK
IQTLAKGTFTSLRAIQTLHLAQNPFICDCNLKWLADYLRSNPIETSGARCASPRRLANKR
IGQIKSKKFRCSAKEQYFIPGTEDTRLSNACNSDPVCPPKCRCESNVVDCSNLKLTKIPE
HIPSSTNELRLNNNDITTLEASGAFKSLSQLKKINLSNNKITEIEDGAFEGASSVIELHL
TANQIDSVRSSMFRGLEGLRMLMLRNNKISCVHNDSFTGLHNVRLLSLYDNQLTTITPGA
FDTLQALSTLNLLANTFNCDCRLAWLGDWLRSRKIVTGNPRCQRPGFLKEIPLQDVALPD
FRCDEGQEELSCVPRPQCPSECTCLETVVRCSNKHLHALPKGIPRNVTELYLDGNQFSIV
PKELSGFKYLQLVDLSNNRINSLTNSSFSNMSQLTTLILSYNSLRCIPKMAFGGLHSLRL
LSLHGNEISELPDGIFNDVTSLSHLAIGANPLYCDCRLRWLSDWVKTGYKEPGIARCAGP
QGMEGKLLLTTPAKKFECTGDVDPEVLAKCNPCLSSPCLNQGVCHSDLMEIYRCSCPPGF
KGKNCETALNACVSSPCANGGTCRVEAEGDYTCKCPLGFEGPTCQTNTDECEDHDCENGA
TCIDGVNNYTCFCPPYYTGEMCEEMEDVCAPGRSPCKHQSTCLIAPTGPKCVCAPGYVGD
DCSVDYNDCEDHRCQNGAHCVDELNGYSCVCRQGYSGQLCEVPPSPLSLCELADCQNSAP
CVERGGRALCQCPPEFGGPRCEKLVSVNFVDRDSYLLLSDLKNWPQANITLQVSTAEDNG
ILLYNGDNDHIAVELYQGHVKVSYDPGSQPGHAIYSTETINDGQFHTVELVTFDQMVNLS
IDGGLPTTMDSFGAVRTLNGEAPLYVGGRGPLQNTPPSSAGMPVDVHAGTFRLWQIQNGS
SFHGCIQNLYINNELQDFTKTQMKPGVVPGCEPCKKIYCVHGICQPDGIQGPVCHCQPGW
SGPHCDEPAANPCQGSKCVHGRCIPLDSQSYRCECDEGYRGALCNQEGELFNPCRRLSCK
HGRCQISDTGDAFCNCESGYTGELCDAESECRGEPMRDFYQVQRGYAICQTTRMVSWVEC
SGVCDKGACCASQRMKRRKYTFECSDGTSFSEEVEKTIKCGCVGCM
NT seq 4641 nt   +upstreamnt  +downstreamnt
atgcccttgagagggaaccgtttcggggcattcctgtgcaggcaggctggacggccactc
tggatgtggctggtgatgctctctgctttgctcatggggaacgccggcgcctgcccagcc
ctgtgtacctgcagcggcaccacagtggactgccacggactgggtctcaggaccatgcca
aggaatatcccccggaatgctgagagactggagctgaatgggaataacctcacacgcatc
accaagagcgacttcgccggactcaagtacatccgagtcctgcagctgatggagaatcag
attaccgtgatcgaacgtggggcttttgacgacatgaaggagctggagagactgcggctg
aaccgtaatcaactgcagcagcttcccgagttgctgttccagaagaaccctgcgctgtct
cgactggacttgagtgagaacttcatccagtccatcccgagaaaagccttcagaggagca
acagacatcaaaaacctccagctggataaaaaccacatcggctgcatcgaggacggagcc
ttcagagcgatgagaggcctggaagtgctaacgctgaacaacaacaacatcagcagcatc
cctgtttccagcttcaaccacatgcccaaactacgaaccttccgcctccattccaacaac
ctgcactgcgactgtcacctggcctggttggcgcagtggctccggcagcggcccacggtg
gggctcttcacccagtgcacgtcccccgctgagctcagaggcctcaatgtggccgaggtg
cagaaacacgaattcagctgctcaggccaccaggagtctttcgccacgcaggcgtgcagc
gtcggcgggggctcttgccccgccatgtgcacgtgcagcaacaacatcgtggactgcaga
gggaagggactcacggccattccagccaacctgccagagagcatggctgagatacgtctg
gagcagaacgggattaagtctgttcctcccggagctttctctccctacaagaagctgcgt
aggatagacctgagcaacaaccagatctcagagatagctccggatgccttccaggggctg
cgctccctcaactcccttgtgctgtatggaaacaagatcaccgacttgccgaagggggtt
ttcgacggcctctatgccctgcaactactgctgctgaatgccaataagatccactgcgtc
cgtgccaacgccttccaggacctgcagaacctctctctgctgtcgctgtacgacaacaag
atccaaaccctggccaagggcaccttcacctcccttcgagctatacagacccttcatctg
gctcagaacccatttatctgtgactgtaacctgaagtggctggccgactacctgcgctcc
aaccccatcgagaccagcggcgcccgctgcgccagccctcgtcgccttgccaacaaacgc
atcgggcagatcaagagcaagaaattccgttgttctgccaaagagcagtacttcatccca
ggtaccgaggacacccgcctgagtaacgcctgtaacagtgacccggtgtgtccacctaaa
tgccgctgtgagtccaatgtagtggactgttccaacctgaagctcaccaagatcccagag
cacattccttcatccaccaatgagctccgcctcaacaacaatgacatcaccaccctggag
gccagtggagcctttaagagcctttcccagctaaagaaaattaacctgagcaacaacaag
atcacggagattgaagacggggcctttgaaggagcctcgtccgtcattgagctacacctc
acagccaatcagatcgactcggtccgaagcagcatgttccgcgggctggaagggctgcgt
atgctgatgctgagaaacaacaagatcagctgcgtccataacgacagtttcacagggttg
cacaacgtccggctgctgtcgctgtacgacaaccagctgaccaccatcactcccggagcc
ttcgacactcttcaggccctctccaccctcaacctgttggcgaacaccttcaattgcgac
tgccgcctggcctggctcggcgattggctgaggagccggaagatcgtgacgggcaaccca
cgctgccagcgtcccggtttcctgaaggagatcccgctgcaggacgtggctctgccggac
ttccgctgcgatgagggccaagaggagttaagctgtgtccccagaccccagtgtcccagt
gaatgcacttgcctggagaccgtggtgcggtgcagtaacaagcaccttcacgcgctgccc
aaaggcatccccagaaacgtgactgagctgtatctggatggaaaccagttcagcattgtg
ccgaaggaactgtctggcttcaaatacctgcagctggtagatctgagcaacaataggatc
aactccctgaccaactcgtccttctctaacatgagccagctcaccactctaatcctgagc
tacaattccctgcgctgcatccccaaaatggccttcggtggtctccactcgctgcgtctg
ctgtccctccatggcaacgaaatctccgagcttcccgacggcatcttcaatgacgtgacc
tcactttcccatttggccattggtgccaaccccctgtactgcgactgccgtttgcgctgg
ctgtctgactgggtaaagactggctacaaagagcccggcattgcccgctgtgctggccca
cagggcatggagggcaaactgttgctcacaacgcctgcaaagaagtttgaatgtacagga
gatgtggaccctgaggtcctggccaagtgtaacccctgtctgtccagcccctgcctcaac
cagggcgtctgtcacagtgacctgatggagatctacaggtgcagctgtccaccaggattt
aagggcaagaactgcgagacggctctcaacgcctgcgtgagcagcccctgcgccaacgga
ggaacctgccgagtggaggcggagggagactacacctgcaagtgtcctctgggctttgag
ggcccgacttgccaaaccaacactgacgaatgcgaagaccacgactgcgagaacggggcc
acctgcatcgacggagtcaacaactacacttgtttttgtcccccctactacacaggggag
atgtgtgaagaaatggaggatgtgtgtgcccccggccgaagcccctgcaaacatcagtct
acctgcctcatcgcccccactggacccaagtgtgtgtgcgctcctggttatgttggcgac
gactgcagcgtagattacaacgactgcgaggaccaccgctgtcagaacggcgctcactgc
gtcgacgagttgaacggctattcctgcgtctgccgccaaggatacagcggtcagctgtgc
gaggtccccccgtctccgctgtccctgtgcgagctcgccgattgccagaacagcgccccg
tgcgtggagcggggaggacgcgccctctgccagtgtccgccggagttcggagggccgcgt
tgtgaaaaattagtcagcgtcaattttgtggacagggactcgtacctgctgctgtctgac
ctcaaaaactggccccaggctaacatcacgcttcaggtgtcgacagcggaggacaacggc
atccttctttataacggagacaacgatcatatcgcagtggagctctatcaaggtcacgtg
aaggtcagctatgaccccggcagccagccaggacatgccatctacagcactgagaccatc
aacgatggccagttccacacagtggagctggtgacctttgaccagatggtgaacctgtct
attgacgggggtctccctaccacaatggacagcttcggggcagtgcggaccctcaacgga
gaggctccgttatacgtggggggtaggggccctctccagaacacacctccctcctctgca
ggaatgccggtggacgtgcacgccggcactttccgcctctggcagatccaaaacggttcc
agcttccacggttgtatccagaacctgtacatcaacaatgagctccaggacttcacaaag
acccagatgaagcccggcgtggtacccggctgtgagccctgcaagaagatttactgcgtc
cacggcatctgccagcctgatggcatccagggaccagtgtgtcactgccagccaggctgg
agcggacctcactgtgacgagcctgccgccaacccctgccagggcagcaagtgtgtccat
ggaagatgcatcccactggacagccagtcgtatcgctgcgagtgtgacgagggctaccga
ggtgccctgtgcaaccaggagggggagctgttcaacccctgccgtcgtctgtcgtgcaaa
cacggtcgctgccagatctcagacactggagatgccttttgtaactgtgagagcggctat
actggggagctctgcgacgccgagtccgagtgtcgaggagagcccatgcgagacttctac
caggtccagagaggctacgctatctgccagacaacacgcatggtgtcatgggtagagtgc
tcaggggtgtgcgacaagggcgcctgctgcgccagccagcggatgaagcgccggaaatat
accttcgaatgcagcgatggcacgtccttcagcgaggaggtggaaaagaccatcaagtgt
ggctgcgtgggctgcatgtag

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