Takifugu flavidus (sansaifugu): 130533648
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Entry
130533648 CDS
T09160
Symbol
slit1a
Name
(RefSeq) slit homolog 1a isoform X1
KO
K06838
slit 1
Organism
tfs
Takifugu flavidus (sansaifugu)
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
tfs00536
]
130533648 (slit1a)
Glycosaminoglycan binding proteins [BR:
tfs00536
]
Heparan sulfate / Heparin
Axon guidance molecules
130533648 (slit1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
EGF
Laminin_G_2
LRRNT
Laminin_G_1
hEGF
LRR_1
LRRCT
EGF_TEN
LRR_9
LRR_14
LRR_EndoS
EGF_Teneurin
EGF_DL_JAG
JAG1-like_EGF2
LRR_NXF1-5
Laminin_G_3
DUF5052
Motif
Other DBs
NCBI-GeneID:
130533648
NCBI-ProteinID:
XP_056903209
LinkDB
All DBs
Position
11:14105059..14169669
Genome browser
AA seq
1546 aa
AA seq
DB search
MPLRGNRFGAFLCRQAGRPLWMWLVMLSALLMGNAGACPALCTCSGTTVDCHGLGLRTMP
RNIPRNAERLELNGNNLTRITKSDFAGLKYIRVLQLMENQITVIERGAFDDMKELERLRL
NRNQLQQLPELLFQKNPALSRLDLSENFIQSIPRKAFRGATDIKNLQLDKNHIGCIEDGA
FRAMRGLEVLTLNNNNISSIPVSSFNHMPKLRTFRLHSNNLHCDCHLAWLAQWLRQRPTV
GLFTQCTSPAELRGLNVAEVQKHEFSCSGHQESFATQACSVGGGSCPAMCTCSNNIVDCR
GKGLTAIPANLPESMAEIRLEQNGIKSVPPGAFSPYKKLRRIDLSNNQISEIAPDAFQGL
RSLNSLVLYGNKITDLPKGVFDGLYALQLLLLNANKIHCVRANAFQDLQNLSLLSLYDNK
IQTLAKGTFTSLRAIQTLHLAQNPFICDCNLKWLADYLRSNPIETSGARCASPRRLANKR
IGQIKSKKFRCSAKEQYFIPGTEDTRLSNACNSDPVCPPKCRCESNVVDCSNLKLTKIPE
HIPSSTNELRLNNNDITTLEASGAFKSLSQLKKINLSNNKITEIEDGAFEGASSVIELHL
TANQIDSVRSSMFRGLEGLRMLMLRNNKISCVHNDSFTGLHNVRLLSLYDNQLTTITPGA
FDTLQALSTLNLLANTFNCDCRLAWLGDWLRSRKIVTGNPRCQRPGFLKEIPLQDVALPD
FRCDEGQEELSCVPRPQCPSECTCLETVVRCSNKHLHALPKGIPRNVTELYLDGNQFSIV
PKELSGFKYLQLVDLSNNRINSLTNSSFSNMSQLTTLILSYNSLRCIPKMAFGGLHSLRL
LSLHGNEISELPDGIFNDVTSLSHLAIGANPLYCDCRLRWLSDWVKTGYKEPGIARCAGP
QGMEGKLLLTTPAKKFECTGDVDPEVLAKCNPCLSSPCLNQGVCHSDLMEIYRCSCPPGF
KGKNCETALNACVSSPCANGGTCRVEAEGDYTCKCPLGFEGPTCQTNTDECEDHDCENGA
TCIDGVNNYTCFCPPYYTGEMCEEMEDVCAPGRSPCKHQSTCLIAPTGPKCVCAPGYVGD
DCSVDYNDCEDHRCQNGAHCVDELNGYSCVCRQGYSGQLCEVPPSPLSLCELADCQNSAP
CVERGGRALCQCPPEFGGPRCEKLVSVNFVDRDSYLLLSDLKNWPQANITLQVSTAEDNG
ILLYNGDNDHIAVELYQGHVKVSYDPGSQPGHAIYSTETINDGQFHTVELVTFDQMVNLS
IDGGLPTTMDSFGAVRTLNGEAPLYVGGRGPLQNTPPSSAGMPVDVHAGTFRLWQIQNGS
SFHGCIQNLYINNELQDFTKTQMKPGVVPGCEPCKKIYCVHGICQPDGIQGPVCHCQPGW
SGPHCDEPAANPCQGSKCVHGRCIPLDSQSYRCECDEGYRGALCNQEGELFNPCRRLSCK
HGRCQISDTGDAFCNCESGYTGELCDAESECRGEPMRDFYQVQRGYAICQTTRMVSWVEC
SGVCDKGACCASQRMKRRKYTFECSDGTSFSEEVEKTIKCGCVGCM
NT seq
4641 nt
NT seq
+upstream
nt +downstream
nt
atgcccttgagagggaaccgtttcggggcattcctgtgcaggcaggctggacggccactc
tggatgtggctggtgatgctctctgctttgctcatggggaacgccggcgcctgcccagcc
ctgtgtacctgcagcggcaccacagtggactgccacggactgggtctcaggaccatgcca
aggaatatcccccggaatgctgagagactggagctgaatgggaataacctcacacgcatc
accaagagcgacttcgccggactcaagtacatccgagtcctgcagctgatggagaatcag
attaccgtgatcgaacgtggggcttttgacgacatgaaggagctggagagactgcggctg
aaccgtaatcaactgcagcagcttcccgagttgctgttccagaagaaccctgcgctgtct
cgactggacttgagtgagaacttcatccagtccatcccgagaaaagccttcagaggagca
acagacatcaaaaacctccagctggataaaaaccacatcggctgcatcgaggacggagcc
ttcagagcgatgagaggcctggaagtgctaacgctgaacaacaacaacatcagcagcatc
cctgtttccagcttcaaccacatgcccaaactacgaaccttccgcctccattccaacaac
ctgcactgcgactgtcacctggcctggttggcgcagtggctccggcagcggcccacggtg
gggctcttcacccagtgcacgtcccccgctgagctcagaggcctcaatgtggccgaggtg
cagaaacacgaattcagctgctcaggccaccaggagtctttcgccacgcaggcgtgcagc
gtcggcgggggctcttgccccgccatgtgcacgtgcagcaacaacatcgtggactgcaga
gggaagggactcacggccattccagccaacctgccagagagcatggctgagatacgtctg
gagcagaacgggattaagtctgttcctcccggagctttctctccctacaagaagctgcgt
aggatagacctgagcaacaaccagatctcagagatagctccggatgccttccaggggctg
cgctccctcaactcccttgtgctgtatggaaacaagatcaccgacttgccgaagggggtt
ttcgacggcctctatgccctgcaactactgctgctgaatgccaataagatccactgcgtc
cgtgccaacgccttccaggacctgcagaacctctctctgctgtcgctgtacgacaacaag
atccaaaccctggccaagggcaccttcacctcccttcgagctatacagacccttcatctg
gctcagaacccatttatctgtgactgtaacctgaagtggctggccgactacctgcgctcc
aaccccatcgagaccagcggcgcccgctgcgccagccctcgtcgccttgccaacaaacgc
atcgggcagatcaagagcaagaaattccgttgttctgccaaagagcagtacttcatccca
ggtaccgaggacacccgcctgagtaacgcctgtaacagtgacccggtgtgtccacctaaa
tgccgctgtgagtccaatgtagtggactgttccaacctgaagctcaccaagatcccagag
cacattccttcatccaccaatgagctccgcctcaacaacaatgacatcaccaccctggag
gccagtggagcctttaagagcctttcccagctaaagaaaattaacctgagcaacaacaag
atcacggagattgaagacggggcctttgaaggagcctcgtccgtcattgagctacacctc
acagccaatcagatcgactcggtccgaagcagcatgttccgcgggctggaagggctgcgt
atgctgatgctgagaaacaacaagatcagctgcgtccataacgacagtttcacagggttg
cacaacgtccggctgctgtcgctgtacgacaaccagctgaccaccatcactcccggagcc
ttcgacactcttcaggccctctccaccctcaacctgttggcgaacaccttcaattgcgac
tgccgcctggcctggctcggcgattggctgaggagccggaagatcgtgacgggcaaccca
cgctgccagcgtcccggtttcctgaaggagatcccgctgcaggacgtggctctgccggac
ttccgctgcgatgagggccaagaggagttaagctgtgtccccagaccccagtgtcccagt
gaatgcacttgcctggagaccgtggtgcggtgcagtaacaagcaccttcacgcgctgccc
aaaggcatccccagaaacgtgactgagctgtatctggatggaaaccagttcagcattgtg
ccgaaggaactgtctggcttcaaatacctgcagctggtagatctgagcaacaataggatc
aactccctgaccaactcgtccttctctaacatgagccagctcaccactctaatcctgagc
tacaattccctgcgctgcatccccaaaatggccttcggtggtctccactcgctgcgtctg
ctgtccctccatggcaacgaaatctccgagcttcccgacggcatcttcaatgacgtgacc
tcactttcccatttggccattggtgccaaccccctgtactgcgactgccgtttgcgctgg
ctgtctgactgggtaaagactggctacaaagagcccggcattgcccgctgtgctggccca
cagggcatggagggcaaactgttgctcacaacgcctgcaaagaagtttgaatgtacagga
gatgtggaccctgaggtcctggccaagtgtaacccctgtctgtccagcccctgcctcaac
cagggcgtctgtcacagtgacctgatggagatctacaggtgcagctgtccaccaggattt
aagggcaagaactgcgagacggctctcaacgcctgcgtgagcagcccctgcgccaacgga
ggaacctgccgagtggaggcggagggagactacacctgcaagtgtcctctgggctttgag
ggcccgacttgccaaaccaacactgacgaatgcgaagaccacgactgcgagaacggggcc
acctgcatcgacggagtcaacaactacacttgtttttgtcccccctactacacaggggag
atgtgtgaagaaatggaggatgtgtgtgcccccggccgaagcccctgcaaacatcagtct
acctgcctcatcgcccccactggacccaagtgtgtgtgcgctcctggttatgttggcgac
gactgcagcgtagattacaacgactgcgaggaccaccgctgtcagaacggcgctcactgc
gtcgacgagttgaacggctattcctgcgtctgccgccaaggatacagcggtcagctgtgc
gaggtccccccgtctccgctgtccctgtgcgagctcgccgattgccagaacagcgccccg
tgcgtggagcggggaggacgcgccctctgccagtgtccgccggagttcggagggccgcgt
tgtgaaaaattagtcagcgtcaattttgtggacagggactcgtacctgctgctgtctgac
ctcaaaaactggccccaggctaacatcacgcttcaggtgtcgacagcggaggacaacggc
atccttctttataacggagacaacgatcatatcgcagtggagctctatcaaggtcacgtg
aaggtcagctatgaccccggcagccagccaggacatgccatctacagcactgagaccatc
aacgatggccagttccacacagtggagctggtgacctttgaccagatggtgaacctgtct
attgacgggggtctccctaccacaatggacagcttcggggcagtgcggaccctcaacgga
gaggctccgttatacgtggggggtaggggccctctccagaacacacctccctcctctgca
ggaatgccggtggacgtgcacgccggcactttccgcctctggcagatccaaaacggttcc
agcttccacggttgtatccagaacctgtacatcaacaatgagctccaggacttcacaaag
acccagatgaagcccggcgtggtacccggctgtgagccctgcaagaagatttactgcgtc
cacggcatctgccagcctgatggcatccagggaccagtgtgtcactgccagccaggctgg
agcggacctcactgtgacgagcctgccgccaacccctgccagggcagcaagtgtgtccat
ggaagatgcatcccactggacagccagtcgtatcgctgcgagtgtgacgagggctaccga
ggtgccctgtgcaaccaggagggggagctgttcaacccctgccgtcgtctgtcgtgcaaa
cacggtcgctgccagatctcagacactggagatgccttttgtaactgtgagagcggctat
actggggagctctgcgacgccgagtccgagtgtcgaggagagcccatgcgagacttctac
caggtccagagaggctacgctatctgccagacaacacgcatggtgtcatgggtagagtgc
tcaggggtgtgcgacaagggcgcctgctgcgccagccagcggatgaagcgccggaaatat
accttcgaatgcagcgatggcacgtccttcagcgaggaggtggaaaagaccatcaagtgt
ggctgcgtgggctgcatgtag
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