Takifugu flavidus (sansaifugu): 130537532
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Entry
130537532 CDS
T09160
Symbol
smg6
Name
(RefSeq) LOW QUALITY PROTEIN: telomerase-binding protein EST1A
KO
K11124
protein SMG6 [EC:3.1.-.-]
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
130537532 (smg6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tfs03019
]
130537532 (smg6)
03032 DNA replication proteins [BR:
tfs03032
]
130537532 (smg6)
Messenger RNA biogenesis [BR:
tfs03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
130537532 (smg6)
mRNA cycle factors
Common to processing body (P body) and stress granule
130537532 (smg6)
DNA replication proteins [BR:
tfs03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
130537532 (smg6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EST1_DNA_bind
PIN_4
EST1
Motif
Other DBs
NCBI-GeneID:
130537532
NCBI-ProteinID:
XP_056910395
LinkDB
All DBs
Position
14:11045477..11054254
Genome browser
AA seq
1608 aa
AA seq
DB search
MANELDRVRISAAELRAEASNSLNIAVCAKEEQHQCRSDKPLNKHAGKRPERQRYQTAPV
RHHRDEDEEPAQNRGPPSDSHKPKEHLQRGKGNASEKALPRHGVTNGTDQRMTDDSCSAQ
NDRKESRAKTEVNEAPSPVKTREHQEPVGAAKPTKKARKPDQEFYQPGNRRSIQGKDCGV
GKEKDKPRAQKPGQKAEQDLQLSTGEGEGTLKTAVHKQRGKDKDAKCVINETQRNQESQD
VGKPPRPSDAAIDDVTNKVEKLNVAEKGDVKFEGQVVGEKSCKKEQMADKQKKREKADEE
RAEKKERGNRRRKGGDREREKNDSKKADEVGERGKGERAKTEKERSKRDADNGNTLGKKE
RRENHRENRSGDKDGCSSDTAKDTRTHGTLDVATEGGGRKQPNAKISTPISKRYSKSDIR
RSRHRTYSSSSASSVTSLEGPGLGVDGAGTKWPRVEPRRGEKERVTNNGRGSRSHLQSWT
TNEESSAESMDGSEMSDTVDNRRRGKNGWEKARGERNKSGETKGRGRGILHISLERQSAT
SSQNTHPQHGRQSVAPRGRGGGILVLPSRSTLSNAPEVGQSRLFGNRGGASSRSRGGRGG
GVRRLWDPNNPDQKPALMNSQSQQSPLQQPTYLQSGYGQLHFLDTDDEVVGSPPVPQGEH
FRSRQAAMAFYKFQNSDNPYCYPMSPGNQHNTGQYYPYPYHMGPYQMSPTNSMYTGSGVG
QFSSGYRGVGYTQSGEGGALTFEEVEQRARGELGRLLRAADAQELQLSNLLSRDRLSAEG
LDRMAHLRADLLKLYEQVILTDIEFSDSQNVDQALWKNVFYQVIERFRQLLKDPTHDNVD
NIRNILLTLLDEGALFFDSLLQKLQTTFQFRLEDYMDGVAVRARPLRKTVKYALISAQRC
MICQGDIARYREQASDTANYGKARSWYLKAQQIAPKNGRPYNQLALLAVYTKRKLDAVYY
YMRSLAASNPILTAKESLMSLFEEVKRKTEQLERRRRQEDEGGSRGPAVRGRGRRDDGAR
VEIWIRPSGPVAAPSSQRGGSESSRDSEQDGELVSLSASELNKRFILSFLHAHGKLFTKV
GMESFPGVAAXVLQEFRTLLQHGPALVGSTHMLQIITINMFTIHNNHSQGEEGEERSALH
EQSIALGLGMFALLVQRCTELLRDTPTVQIDDAEEGQKGEEMEGMVHVSASSLDLRELLP
SIKVWSDWMLGHPDQWNPPPHSLDCCPDVWQCLADLCNVLARVDHEEVPLYKVDTEESEG
DEELTVLQLKEDRLLAGFVPLLAAPQEPCYIDRHTDTAIAADCKRVTVLKYFLEALCGQE
EPLLAFKGGKYISVATPPSNHSGDMRSRQDSLTEKESDDVIIEAESSLSASEDEEEAGDS
ENDIRQLKARRHALANKLAQQQKRKDKIQAVLQIGGQLELEVRPLFLVPDTNGFIDHLAG
LKKLLQCGTYIIVVPLIVITELDGLAKGQDNFGGRLGPGAPKTGTAAHFQAVQANARLAV
SFLEKGFEAREPCLRALTSRGSQLESIAFRSEDTSRQQGNNDDVILSCCLHYCKDKAKDF
MPSERSGTVRLQREVVLLTDDRNLRVKALTRNVPVRDIPAFLSWAKVG
NT seq
4827 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacgagctggacagagtacgaatctctgccgcggaactacgagccgaagcttct
aattccctcaatattgctgtttgtgcaaaagaggagcagcaccagtgtcgttcagacaag
ccactgaacaagcatgcagggaagcggcctgaacggcagcgctaccagacggcgcctgtg
cggcaccaccgtgatgaggatgaggaacccgctcagaaccgcggcccgccgtcggattct
cacaagcccaaagagcatttacagcgtggaaaaggtaatgcgtctgaaaaagctttgcca
agacacggggtgactaacggcactgaccagcggatgacagatgacagttgtagcgcccaa
aatgacagaaaggagagtcgggctaaaacggaagtgaatgaggcgccgagcccggtcaaa
actagagagcatcaggaacctgttggagccgccaagccaaccaaaaaagcacgcaaacca
gaccaagaattttatcaacctggaaataggaggagcattcaaggaaaggactgtggagta
ggaaaagagaaagataagccccgggctcaaaagcctgggcagaaagctgagcaggattta
cagctgagtacaggggaaggggaggggaccttgaaaacagctgtacacaagcagagaggg
aaagataaagatgcaaaatgtgtgataaatgagacgcagagaaaccaagagagccaagac
gtaggaaaacctccacgaccttctgacgccgccattgacgacgttactaacaaagtggaa
aagctcaacgtggcagaaaagggtgatgtgaaatttgaaggccaagttgttggagagaaa
agttgcaagaaggagcaaatggctgataagcagaaaaaaagagaaaaagcagacgaagaa
agagcagaaaagaaggaaaggggcaatcgtaggagaaaagggggagatagggaaagagaa
aagaacgattccaaaaaagctgatgaagtgggggagaggggaaagggtgaaagggctaaa
acggagaaagaacggagtaagagagacgcagataatggcaacaccctgggtaaaaaagag
agaagagagaatcacagagaaaacagaagtggagataaagacggctgctcctctgatacg
gcaaaagacaccaggacacacggaaccctcgacgtggccacagaaggaggcggcagaaag
caacccaatgcaaagatttccacacccatctcaaaacgctattccaaatcggatattcga
cgctcccgccatcgcacttacagcagtagctcggccagcagtgtcaccagcttggaaggt
cccggtttaggagtggatggcgcaggtaccaagtggccacgcgtggagccaagacgtggg
gagaaagagagggtgacaaataatgggagaggaagccgatctcatttacagagttggaca
accaatgaggaatcatcggcagaatccatggatggaagtgagatgagtgacacagtagac
aatcggaggagaggaaaaaatgggtgggaaaaagcgagaggagaaagaaacaaatccggg
gaaaccaaaggtagaggccggggaatcctgcacatttctcttgaaaggcagtcggctact
tcatcacaaaacacacatccacaacatggcagacagagcgtggctccgcgaggccgcggc
gggggtattctggtgctcccatctcgctccaccctctccaacgcacccgaggttggacaa
agtcgtctttttggaaaccggggaggagcatcttccaggagccggggaggaagaggcgga
ggagtgaggcgactctgggatccaaataaccccgaccagaaacctgctcttatgaacagc
cagtcgcagcagtcgcctctccaacagcccacctacctgcaaagtggatatggacagctt
cattttctggacacggacgacgaggtagtgggcagccccccggtcccacagggagagcac
tttcggtccaggcaggctgccatggccttctacaaatttcaaaactctgacaacccatac
tgttaccccatgtctcctggcaaccaacacaacactggccagtactatccatacccttat
catatgggcccctaccaaatgtctcccactaacagtatgtatactgggtccggtgtgggg
cagttctctagcggttataggggagtaggttatactcagtcaggtgaaggaggtgctttg
acattcgaagaagtggaacagcgagctaggggagagctgggacggctgctgagggctgca
gatgcccaggagctccaactcagtaacctgctgtccagggacaggttgagtgctgaaggt
ctggatcgcatggcccacctaagagcggacctgttgaagctttatgagcaggtcatcctg
accgacatcgagttttcagactcccagaatgtggatcaagctctgtggaagaacgtcttt
taccaggtcatagagcgcttccggcagcttctgaaggacccgactcatgacaacgttgat
aacatcaggaacatcctgctgacgctgctggatgagggtgcactgttctttgattcgctg
ctgcagaagctgcagacaacatttcagttcagactggaggattacatggacggcgtggct
gtcagggcgcgaccgttacgcaaaacggtaaagtacgccctcattagcgcgcagcgttgc
atgatttgccagggagatatagcccggtaccgagaacaagccagcgacacggccaactac
ggcaaagctcgcagctggtacctgaaagcccagcagattgcacccaaaaacggacgtccg
tataaccaactggccctcctggctgtttataccaagcgtaaattggatgctgtgtattat
tacatgcgcagcctggcagcctccaaccccatcctgactgccaaggagagcctgatgagt
ctgtttgaggaagtgaagcgcaagactgagcagcttgagcggaggaggagacaggaagat
gaaggaggctccaggggtccagctgtaagaggaagaggcagaagggacgacggagcacgt
gtggagatttggattcgcccgagtggtccggtagctgccccatcctcacagaggggtggc
agtgaatccagcagagactctgagcaggacggagagctggtcagtctcagtgcaagtgag
ctcaataagagattcattctgagtttccttcacgcacatggaaagctctttaccaaagtg
ggcatggagtccttccccggagtggcggccngcgtcctgcaggagttcaggacgctgctg
cagcatggccccgccctggtgggcagcacgcacatgctgcagatcatcaccatcaacatg
ttcaccattcacaataaccacagccagggtgaagaaggggaagagcgatctgctttacat
gaacaaagcatcgccttgggtctgggcatgtttgcgctgctggtgcagcgctgcacagag
ctgcttcgagatactccaacagttcaaatagatgatgcagaggaaggacagaaaggagag
gagatggaagggatggtccacgtctctgcatcctccttggaccttagagagctactacca
agcatcaaggtctggtctgactggatgttgggacacccagaccagtggaaccccccacca
cacagcttagactgctgccctgatgtttggcagtgtctggcagacctgtgcaacgtgctg
gcacgcgttgaccatgaggaagtgccactgtacaaagtggacaccgaggagagcgaagga
gatgaggagttgacggtgctgcagctgaaggaggacaggctcctggcaggcttcgtccca
ttattggcggcaccgcaggagccctgttacatagacagacacacggacacagcaatagca
gcagattgtaagagagtcacagtgttgaagtacttcctggaggccttgtgtggacaagaa
gaacctctgttggccttcaagggaggcaaatacatctctgtggcgacgcctccatccaac
cactcgggggacatgaggagcagacaggattctctcacggagaaagaaagcgacgacgtc
atcatcgaggccgagtcctctctctctgcgtcggaggacgaagaggaggcgggagacagc
gagaacgacatcaggcagctgaaggcgcggcgccacgccctcgctaacaaactggcgcag
cagcagaaacgcaaggacaaaatccaggcggttctgcagataggtgggcagttggagctg
gaagtgcggcctctgttcttggtaccggacaccaacggattcattgatcacttggcaggg
ctgaagaaactgcttcagtgtggaacctacataatagtggtgccactcattgtcattacc
gagttggacggcttggctaaaggtcaggacaactttgggggtcgactgggtccaggtgca
cccaagactggcactgcggctcatttccaggccgtgcaggcgaacgcccgcctggcagtg
agcttcctagagaagggatttgaagctagagagccgtgcctccgagccctgacgagcaga
ggaagccagttggagtccatagccttccgtagtgaagacacctcgagacagcagggaaac
aacgacgatgtgattttgtcctgctgtctccactactgcaaagacaaggctaaagacttc
atgcctagtgagagaagtggcacagtgaggctccagagggaggtggtcctcctcacggac
gatcgcaacctgcgcgtcaaagccttgacccggaacgttcccgtccgagacatcccggcc
ttcctgagctgggccaaagtgggctga
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integrated database retrieval system
