Takifugu flavidus (sansaifugu): 130540033
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Entry
130540033 CDS
T09160
Name
(RefSeq) LOW QUALITY PROTEIN: thrombospondin-1-like
KO
K16857
thrombospondin 1
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs04115
p53 signaling pathway
tfs04145
Phagosome
tfs04148
Efferocytosis
tfs04350
TGF-beta signaling pathway
tfs04510
Focal adhesion
tfs04512
ECM-receptor interaction
tfs04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
130540033
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
130540033
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
130540033
04148 Efferocytosis
130540033
09143 Cell growth and death
04115 p53 signaling pathway
130540033
09144 Cellular community - eukaryotes
04510 Focal adhesion
130540033
09142 Cell motility
04820 Cytoskeleton in muscle cells
130540033
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tfs04131
]
130540033
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
tfs00536
]
130540033
Membrane trafficking [BR:
tfs04131
]
Endocytosis
Phagocytosis
Opsonins
130540033
Glycosaminoglycan binding proteins [BR:
tfs00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
130540033
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
TSP_1
TSP1_spondin
VWC
TSP1_ADAMTS
EGF_3
TSP1_CFP_C
Laminin_G_3
cEGF
EGF
TSP1_CCN
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
130540033
NCBI-ProteinID:
XP_056914846
LinkDB
All DBs
Position
16:complement(9450478..9458369)
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AA seq
1171 aa
AA seq
DB search
MMLCGIFLLLMLSGCGGARLAGSADDNSVYDLFDLARVSKRQNGVTLVKGADPYSPAYKV
LNADLIPSVPDSSFRDILDSILAERGFLLIINLKQFKRSRGSILTIEKNDGSGSVFEIVS
NGRANSLDVVYSTANQQQIASIEDADLATGHWKNITLFVQDDRVKLYVGCEEVNEAEMDL
PIHKVLSQDLADIATLRIAKGAVRDKFTGVLQNVRFVFGTSLDAILRNKGCQNGAMLTDV
MTLDNPINGSSPSRSDYTGQKPKDVQPVCGLSCEEISSMFRELRGIGVVVKKLSIDLRKV
SEESMLLKNQMNNQSGICIHNGIVYQDKDEWTVDSCTECTCQNSATVCRKISCPLIPCAN
ATVPDGECCPRCGSSMVSDQGGWSPWSAWTQCSVTCGRGIQQRGRSCDRINSDCEGTSVQ
TRDCYPQECDKRFKQDGGWSHWSPWSSCSVTCGEGVITRIRLCNSPTPQMGGMDCQGEGR
QTEICHKSPCPIDGGWGPWSPWDTCTLTCGKGIQTRKRLCSDPAPKFGGMDCVGEAKMSQ
VCNKQDCPIDGCLSNPCFPGAKCTSFPDGSFRCGRCPLGYTGDGITCRDIDECKAVPDAC
HIHNGVHLCENTEPGYNCLPCPARFSGPQPFGRGVEQATAKKQVCKPRNPCQDGSHDCHK
NANCIYLGVYSESMFRCECKPGYAGNGHICGEDTDLDGWPNHDLLCVENATYHCKKDNCP
NLPNSGQEDHDKDGLGDECDTDDDNDRIPDDRDNCPRLYNPAQYDADRDDVGDRCDNCVY
EANTDQTDTDNNGEGDACAVDIDGDGVLNENDNCPYVYNVDQRDTDRDGVGDHCDNCPLE
HNPDQIDSDSDRVGDKCDNNQDIDEDGHQNNLDNCPYIPNANQADHDKDGKGDACDHDDD
NDGIPDDKDNCRLAFNPDQTDSDGDGRGDICKDDFDQDNVLDIYDVCPENFAISETDFRR
FQMVPLDPTGTSQIDPNWVVRHQGKELVQTVNCDPGIAVGYDEFSAVDFSGTFFINTDRD
DDYAGFVFGYQSSSRFYTVMWKQITQTYWSTTPTKAQGYSGLSIKVVNSTTGPGEHLRNA
LWHTGDTPGQVRTLWHDPKNIGWKDFTAYRWHLTHRPKTGLIRVVMYEGKRIMADSGNIY
DKTYAGGRLGLYVFSQEMVYFSDLKYECRDT
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
atgatgctctgtggcatctttttactgctgatgctttcgggctgtggaggcgccagactg
gctggcagcgcagatgataacagtgtctatgacctatttgatctggctcgggtcagcaag
cggcagaatggagtaaccctggtcaaaggtgcagatccttacagccctgcctacaaggtt
ctgaatgcagacctgatcccctcagtccccgacagctccttcagggacatccttgactcc
atcctggctgagaggggcttcctgctcatcatcaacctgaagcagttcaagagaagccga
ggcagcattttgaccattgagaagaatgacggctcaggatccgtttttgagattgtttcc
aatgggagggcgaactccctggatgtggtctactccactgccaaccagcagcagattgcg
tctatcgaggatgcagatttggccacaggacactggaagaacatcacgctgtttgttcag
gatgaccgagtgaagctttacgtgggctgcgaggaggtcaatgaggcagagatggatttg
cccatccacaaggtgctatcccaggacctggcggacatcgctaccctcaggatcgcaaag
ggagccgtgagggacaaattcacgggagtgctgcagaatgtgcgctttgtttttgggacc
tcacttgatgccattttgagaaacaaaggatgccagaatggagccatgttaactgatgtc
atgaccctggacaaccctatcaatgggtccagcccctcccggagtgattatactggccaa
aaacccaaagatgtccagcctgtctgtggtttgtcttgcgaagaaatctccagcatgttt
agggagctcaggggaatcggtgtggtcgtgaaaaaactgtctattgacctgcgcaaagtg
tctgaggaaagcatgctgctgaaaaatcaaatgaacaaccaaagcggaatctgcatccac
aacggcattgtgtaccaggacaaagacgagtggacggtggacagctgcaccgagtgcacc
tgccagaactctgctactgtgtgtcgtaaaatctcctgccccctgatcccgtgtgctaac
gctaccgtgcctgacggagagtgctgccctcgctgcgggagttcaatggtttctgatcag
ggtgggtggtctccctggtctgcatggacccagtgttctgtgacgtgtggtcgaggcatc
cagcagcgcggacgctcctgcgaccgcatcaacagcgactgcgagggcacttctgtccag
acccgcgactgctacccccaggaatgcgacaaacgattcaaacaggatggtggttggagc
cactggtctccctggtcatcatgctctgtaacctgtggtgagggggtcatcacccggata
cgcctctgcaactcccccacaccccagatgggtggcatggactgccagggtgaaggacgt
caaactgaaatctgccacaagtcaccttgtcccatcgatggaggttggggaccttggtca
ccatgggacacctgcactctcacctgtggcaaaggaattcagacccgcaagcgtctctgc
tcagaccctgcccccaaatttggaggaatggactgtgttggtgaggctaagatgtctcaa
gtgtgcaacaaacaagactgtcctattgatggttgtctgtccaacccttgcttccctggg
gcgaagtgcaccagtttccccgacggctccttccgttgtggcaggtgtccacttggctac
actggagacggcatcacttgcagagacattgatgagtgcaaagcagtccctgatgcctgc
cacattcataacggagtccacctgtgtgagaacacagaaccaggttacaactgcctgccc
tgcccagctcggttctctggccctcagccctttgggcggggagtggagcaagcaactgcc
aaaaagcaggtgtgcaaaccacgtaatccttgtcaggatggaagccacgactgccataaa
aatgcaaactgcatttacttgggggtctacagtgagtccatgttccgctgtgagtgcaaa
cctgggtatgcaggaaacggtcatatttgtggagaggacactgaccttgacggatggccc
aaccacgacttgttgtgtgtcgagaatgccacctaccactgcaagaaggacaactgcccc
aatcttcccaactctggccaggaggatcatgacaaagatggtctgggtgatgaatgtgac
acggatgatgacaatgacaggattccagatgatagggacaactgcccaagactgtacaac
cctgcccagtatgacgcagacagagatgatgtcggcgatcgctgtgacaactgtgtttac
gaggctaacactgaccaaactgacaccgacaataacggagagggtgatgcctgcgctgtc
gacattgatggtgacggtgttctgaatgagaacgacaattgcccgtatgtttataacgtg
gatcagagggatactgacagggacggcgtgggtgaccactgtgacaactgccctctggaa
cacaaccctgatcagattgattcagactcagatcgcgtaggagacaagtgcgataacaac
caggacattgacgaggatggtcaccagaacaacttggacaactgcccctacatacccaac
gccaaccaggctgaccacgacaaggacggaaagggtgacgcttgtgaccacgacgatgac
aacgatggcattcctgacgacaaagacaactgtaggctggcgttcaaccctgatcagaca
gattctgatggcgatggccgtggtgatatctgcaaagatgactttgatcaagacaacgtt
ttggatatttatgatgtgtgccctgagaattttgccatcagtgaaactgatttccgtaga
ttccaaatggttcctttagacccaacaggcacctcgcagatcgaccctaactgggtggtg
cggcatcagggcaaagagttggtacagaccgtcaactgcgaccctggcattgctgttggt
tatgatgagttcagtgcagtggatttcagtggaaccttcttcattaacacggacagagac
gatgactatgcggggttcgtgttcggttaccagtccagctcgcgattctacacggtgatg
tggaaacagatcacacagacctactggtccaccacacccacaaaagctcagggttactct
ggactgtcaatcaaagttgttaattccaccactggacctggcgagcacttgaggaacgcc
ctgtggcacaccggagacaccccaggacaggtacgtactctgtggcatgaccccaagaac
attggctggaaggacttcacagcctacaggtggcatctgacccacagacccaaaactgga
cttattagagtggtcatgtatgaaggcaaaagaatcatggccgattctggaaacatctac
gacaagacgtacgctggtgggcgactgggcctatacgtgttctctcaggagatggtttac
ttctctgatctgaaatatgaatgcagagacacataa
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