Thermococcus gammatolerans: TGAM_1277
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Entry
TGAM_1277 CDS
T00920
Symbol
nth
Name
(GenBank) Endonuclease III (nth)
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
tga
Thermococcus gammatolerans
Pathway
tga03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tga00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
TGAM_1277 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tga03400
]
TGAM_1277 (nth)
Enzymes [BR:
tga01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
TGAM_1277 (nth)
DNA repair and recombination proteins [BR:
tga03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
TGAM_1277 (nth)
Prokaryotic type
TGAM_1277 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
Ogg-HhH
EndIII_4Fe-2S
RecR_HhH
HHH_5
Scm3
Motif
Other DBs
NCBI-ProteinID:
ACS33779
UniProt:
C5A6B7
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All DBs
Position
1198963..1199655
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AA seq
230 aa
AA seq
DB search
MSLDGFTFEESWDEKRRRAEKIVEILMRTHPREKLLIGDPYRTLIHCIISQRMRDEVTYR
VWEELFKKYGDIETIANTPVDEMREFLRKRGVGLWKTKGEWIVKASRIILEKYGGKVPDD
IKELMKLPGIGRKCANIVLAYGFGRQAIPVDTHVNRISKRLGLAPPRVPPEKVEEYLMEL
IPKEKWIYVNHAMVDHGRSICRPIRPKCESCPLKELCPYAKGLVRDEDIK
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
ttgagccttgacggcttcaccttcgaggagagctgggatgagaagaggagaagggccgag
aaaatagttgaaatcctcatgaggacccacccaagggaaaagctcctcatcggtgaccct
tacaggacgctgatccactgcataatctcacagcgcatgcgcgatgaggttacctaccgc
gtctgggaggagctgttcaagaagtacggggacatcgagacgatagcgaatactcccgtc
gatgagatgcgagagttcctcaggaagaggggcgtcggcctctggaagacgaagggcgag
tggattgtgaaggcatcgaggataatccttgaaaagtacggcgggaaggtgcccgatgac
atcaaagagctcatgaaactgcccggcataggcaggaagtgcgccaacatcgttctcgct
tacggcttcggaaggcaggcgattcccgttgatacgcacgtgaacaggataagcaagcgc
ctcggcctcgctccgccgagggttcccccggagaaggtcgaggagtacttgatggaactg
attccaaaagagaagtggatttacgtgaaccacgcgatggtcgaccatggaaggagcata
tgcaggccgataaggccgaagtgcgaaagctgtccgctgaaggagctctgcccctatgcg
aaggggctcgtcagggacgaggacataaagtga
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