Thermococcus gammatolerans: TGAM_1396
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Entry
TGAM_1396 CDS
T00920
Name
(GenBank) SAM-dependent tRNA/rRNA cytosine-C5 methylase
KO
K22901
tRNA (cytosine40_48-C5)-methyltransferase [EC:2.1.1.-]
Organism
tga
Thermococcus gammatolerans
Brite
KEGG Orthology (KO) [BR:
tga00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tga03016
]
TGAM_1396
Transfer RNA biogenesis [BR:
tga03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
TGAM_1396
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Methyltr_RsmF_N
RsmF-B_ferredox
FtsJ
Methyltransf_31
NSUN5_fdxn-like
GCD14
Ubie_methyltran
Motif
Other DBs
NCBI-ProteinID:
ACS33898
UniProt:
C5A6N6
LinkDB
All DBs
Position
complement(1312340..1313269)
Genome browser
AA seq
309 aa
AA seq
DB search
MLEKLFSLGYSKTFAERYYELWGERALSIAEAMEKPLPRCFRVNTLRIEIPKLTKLLNKK
GFQFRRIPWAREGFCLTREPFSITSTPEYLSGLLYIQEASSMYPPVALEPKPGEVVADMA
AAPGGKTSYLAQLMENEGIIYAFDVGEERLKETRLNLSRLGVTNTVLFHRSSLYIDELGV
EFDKILLDAPCTGSGTIHKNPERKANRTIEDVKFCQNLQMKMLEKGLSVLRKGGILVYST
CSLEPEENEFVIQWVLDNFDVELLPLRYGEPALTRPFGIELSEEIKKARRFYPDRHGTSG
FFVAKLRKL
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaaaagttgttttccctcggctactccaagaccttcgcggagcgctattacgag
ctctggggcgagagggccttaagcatagccgaggcgatggaaaagcccctgccaaggtgc
ttccgcgtgaacacgcttcgcattgagattccaaagcttacaaagctcctcaacaagaag
ggcttccagtttaggaggattccctgggcgagagaaggtttctgcctcacgcgcgagccg
ttttcgattacatcaacgcccgagtacctgagcggtctcctctacatccaggaagcgagt
tcgatgtatcctcccgttgcccttgagccgaagcccggcgaagtcgttgcagatatggcc
gccgctccaggaggaaagacgagctatttggcccagcttatggaaaacgagggaataatc
tacgcttttgatgtcggcgaggagagactgaaggagacccgcttaaacctctctcgcctc
ggcgtcactaatacagttctcttccaccgctcgtcgctctacatagacgaactcggcgtt
gagttcgataaaatcctcctcgatgcgccgtgcacaggttcagggacgatacacaagaac
cccgagcggaaggctaaccgcacgatagaggatgtgaagttctgccagaacctccagatg
aagatgcttgagaagggactgagcgtcctcaggaagggcggaatcctggtttactcaacc
tgctcactcgaaccggaggagaacgagttcgtaatccagtgggttctggacaacttcgac
gttgaactgcttcccctccgctacggcgagcccgcactaacgagacccttcggaatcgag
ctgagcgaggaaataaagaaagcaaggcgcttttatcccgacagacacgggacgagcggt
ttcttcgtggcgaagctcaggaagctttga
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