Tunturiibacter gelidiferens: RBB81_16770
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Entry
RBB81_16770 CDS
T10211
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
tgi Tunturiibacter gelidiferens
Pathway
tgi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tgi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RBB81_16770 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tgi03400
]
RBB81_16770 (nth)
Enzymes [BR:
tgi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
RBB81_16770 (nth)
DNA repair and recombination proteins [BR:
tgi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RBB81_16770 (nth)
Prokaryotic type
RBB81_16770 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
Motif
Other DBs
NCBI-ProteinID:
XCB21226
UniProt:
A0AAU7YYF2
LinkDB
All DBs
Position
3867653..3868459
Genome browser
AA seq
268 aa
AA seq
DB search
MAKTIVVRTGTPAKQPRGAKSEAVVGAKARAIAKSEPVAAKKKDGKTRNPLAPERVAAIL
DALRKTYPGVVCALNHRGAWELTVATILSAQCTDVRVNLVTPALFKAFPTPKAMAAASLP
ELEELIRTTGFFRNKAKSIQGAARVVVEKFGGKVPQTMEEILTLPGVARKTGNVVLGSWF
NIAVGVVVDTHVMRLSRRLELAGTTPGSTAPEKVERDLMKIIPQDRWIAFSHELIHHGRQ
ICVARKPKCVDCTLERLCNSRDKTWSSH
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagacgattgtggttcggacgggaacgccggcaaagcaacctcgtggtgcgaag
agtgaagctgtggttggtgcgaaggctcgcgcgattgcgaagtccgagcctgttgcggca
aagaagaaggatgggaagacgcggaatccgttggcgccggagcgggtggcggcgattctg
gatgctctgcggaagacataccccggcgtggtgtgtgcgctgaatcatagaggtgcgtgg
gagctgacggtggctacgattctgtcggcgcagtgcacggatgttcgggtgaatctggtg
actccggcgttgttcaaggcgtttcctactccgaaggcgatggctgccgcttccctgccc
gagcttgaagagttgattcggacgaccggatttttccgcaataaggcgaagtcgattcag
ggggcggcgcgggtggttgtcgagaagtttgggggtaaggtgcctcagacgatggaggag
attcttacgcttccgggggtggctcggaagactgggaatgtggtgttgggctcgtggttt
aacattgcggttggcgtcgttgtggatacgcatgttatgagattgtcgcgacggctggag
ttggctggaactacacctgggtcgacggcgccggaaaaggtggagcgggatctgatgaag
attattccgcaggatcgttggatcgcattttcgcatgagctgattcatcatgggcggcag
atttgtgtggctcgcaagccgaagtgtgtggactgtacgcttgagaggctgtgtaactcg
cgggataagacgtggagctcgcactag
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