Thalassovita gelatinovora: HFZ77_17580
Help
Entry
HFZ77_17580 CDS
T06533
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
tgl
Thalassovita gelatinovora
Pathway
tgl01501
beta-Lactam resistance
tgl01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
tgl00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HFZ77_17580
01503 Cationic antimicrobial peptide (CAMP) resistance
HFZ77_17580
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tgl02000
]
HFZ77_17580
01504 Antimicrobial resistance genes [BR:
tgl01504
]
HFZ77_17580
Transporters [BR:
tgl02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
HFZ77_17580
Antimicrobial resistance genes [BR:
tgl01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
HFZ77_17580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
Ilm1
tPilZ
Motif
Other DBs
NCBI-ProteinID:
QIZ82157
LinkDB
All DBs
Position
3600332..3603439
Genome browser
AA seq
1035 aa
AA seq
DB search
MASFFIHRPVFAWVLAIAVMLTGAFSVMNLPISQYPDIAPTTVRISASYTGASAETVENS
VTAVIEDGLTGLDGMTYMTSSSTEGAASVSLIFDDTIDPDMAQVQVQNKLQLVESQLPDS
VTTAGVSVTRSTTSILMVGALVSEDGSYSSLQLGDILSSTILDPVQRTDGVGSVNIFGTE
YAMRIWLNPERLFQYQLTPNDVTSAVTQQNTNVTVGSLGDQPVTKGQQFTVSLSAQSQLE
SVVDFQNILLKTNTDGSAVYLADVATVELAEEDYGSFSRFNSHPAAGFGVNLSTGANAVD
TAEAVREVISDLSSALPAGVAVEYPYDTSPFVEESIEQVYHTLIEAVVLVFLVILLFLQS
WRATIIPTIAVPVVLLGTFGVLSAFGMSINTLSMFALVLAIGLLVDDAIVVVENVERVME
EEGLDAVAATEKSMGEISTALIGIVMVLSAVFLPMAFMSGSTGVIYKQFSVTIISAMVLS
LFVALILTPAMCAQLLKQTHDKQPIAPLRWFNTGLDRLTAGYGGMIGRLALRPLRMVLVL
GLVGAGAWWVYDRLPTSFLPTEDQGMLMAIVELPQGSTVQQTEHMVSVIEDHFLTNEADM
VETVFATVGFSFGGTGQNNAMMFIRLKDYDDRPGQDTADLMNRVNRTFFQSRLGSVFVLQ
PPAIPGLGTSSGFTMYLVDQSGAGQEALSAAADQLVARGNEDGRVTNLRGNDDATEPALK
LQIDQQKAEALGVSVSDVNSMLSTVFSGSYVNDFPLGNDLRGVIVQGGATWRMQPEDVDQ
WYARNSGSEMVPLSAFITREWETITPKLARYGGTRALEISGAAAAGLSSGDAMTAMEELT
AGLDGSFAPAWTGLSYQERLSGNQESILYTLSALVVFLCLAALYESWTVPFAVMLSVPVG
ILGALTATWYFGQSNDVYFKVGLLTTIGLAARNAILIVEFAESQRSGGMALLQATVSAAQ
QRLRPILMTSLAFGFGVLPLALASGAGANAQKSIGTGMLGGIIFSAVIGIVMVPVFYVAV
IKATGFFRARVETTQ
NT seq
3108 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgttcttcattcaccgccccgttttcgcttgggttcttgctattgctgtcatg
ctgaccggcgcgttcagcgtgatgaaccttcctatttcacagtatccggacattgcaccg
acaacggttcggatcagcgcgtcctataccggggcgtctgccgaaaccgtcgaaaattca
gtcactgcggtcattgaggatggtctgaccgggttggacgggatgacctatatgacgtca
tcctcaacggaaggcgccgccagcgtatcgctgattttcgatgacacgattgaccccgat
atggcgcaggtccaggtgcagaacaagcttcagcttgtggaatcgcagcttcccgacagt
gtcaccactgccggtgtatctgtcacccgctcgaccacctccattctgatggtcggagcc
ttggtcagcgaagacggcagctattcttctttgcagctcggcgacattttgagcagcacc
attctggatccggtgcagcgcacggatggtgttggatcggtcaacatctttggcacggaa
tatgcgatgcgcatctggctgaacccggagcgcctgttccagtatcagttgaccccgaac
gacgtgacctcggcggtgacccagcagaataccaatgtcacggttggcagtctgggcgat
caacccgtcaccaaggggcagcagtttaccgtttccttgtccgcgcagtcccagcttgag
tcggttgtggatttccagaacatcctgctgaaaacgaacaccgatgggtcggcggtttat
cttgccgacgtggcgacggtcgaactggcagaagaagactatggcagcttcagccgcttt
aatagtcatccggcagcgggttttggcgtcaatctgtccactggggccaacgcggtggac
actgccgaagcggtgcgcgaggtgatcagcgacctgtcgtcggccctgcccgctggcgtg
gcggtcgaatacccctatgacacatcgcccttcgtcgaagagtcgatcgagcaggtctat
cacacgctgatcgaagccgtggttttggtgtttctggtcattctgctgttcctgcaaagc
tggcgggcgacgatcattccaaccattgccgtgccggtggtcttgctggggacgtttggg
gtgctgtcagcctttgggatgtcgatcaacaccctgtcgatgtttgcgctggtgctggcc
attggtctgctggtggatgacgccatcgtggtggtcgagaatgtcgagcgcgtgatggaa
gaagaagggcttgatgcggtggccgcgaccgaaaaaagcatgggggagatatctaccgcg
ctgatcgggatcgtcatggtcctgtcggcagtgtttctgcccatggcgttcatgtccggg
tcgaccggggtgatttacaaacaattttcggtcacgatcatttcggccatggtactgtcg
ctgttcgtggcgctgatcctgaccccggccatgtgtgcgcagcttctcaagcagacccac
gacaagcaacccatcgcaccgctgcggtggttcaataccgggctggaccgtttgaccgca
ggctatggcggcatgatcggacggctggccctgcgccccttgcgtatggtgctggtgttg
ggtcttgtcggtgccggggcctggtgggtctatgaccgtttgccgacatcgttcctgccg
accgaagatcagggcatgttgatggcgatcgtcgaattgccgcaaggatcgaccgtgcag
cagaccgaacatatggtgtcggtgatcgaggatcatttcctgaccaacgaagccgatatg
gtcgagaccgtctttgccaccgtcgggttcagttttggcggaaccggccagaacaacgcg
atgatgttcatccggttgaaagattacgatgatcgacccggccaggataccgccgatttg
atgaaccgggtaaaccgcacgttctttcagtcccgactgggcagcgtgttcgttctgcaa
ccgcctgcgatcccggggttggggacgtcatcgggctttacgatgtatcttgtcgatcag
tccggggcgggacaggaagcgttgagcgccgcggccgatcagttggtggcgcgcggcaat
gaggatggtcgggtgacaaacctgcgtggcaatgacgatgccaccgaaccggcgttgaaa
ttgcagatcgatcagcagaaagccgaagcccttggggtatccgtttcggatgtgaattcg
atgctttccactgttttttcaggatcgtatgtcaacgattttccgcttggcaatgatctg
cgcggggtgatcgtgcaaggcggcgcgacgtggcggatgcagccagaggacgttgatcaa
tggtatgcacgcaattccggttcagaaatggtcccgctgtcagcctttatcacacgggaa
tgggaaacgattacgcctaagctcgcccgatatggcggaacccgtgcgctggagatttcc
ggcgcagccgcagcgggcctgagttccggggacgcaatgacagcgatggaggaactgaca
gccggtcttgacgggtcctttgcgcccgcctggaccgggttgagttatcaagaaaggctg
tcgggcaatcaggaaagcattctttacaccttgtcggcgctggtggtctttctctgtcta
gctgccttgtacgaaagctggaccgttcccttcgcggtgatgctgtcggttccggtcggt
atcctgggggcgctgacggcgacctggtatttcggccagtctaatgacgtgtatttcaag
gtcggattgttgaccacgatcggtctggccgcaagaaacgcgatcttgatcgtcgaattc
gctgaatcccagcgttcgggtggcatggccctgttgcaggcgacggtgtcggcggcgcag
caacggctgcgtccgatcctgatgacctcgctggcctttggcttcggcgtcttgccgttg
gccttggcctccggagcgggtgcgaatgcacaaaaatccatcggcaccgggatgttgggc
gggatcatcttttctgcggtgatcgggatcgttatggtcccggtgttctatgtcgccgtc
atcaaagccacgggatttttccgtgcccgtgtggagactacccagtga
DBGET
integrated database retrieval system
