Toxoplasma gondii: TGME49_236580
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Entry
TGME49_236580 CDS
T01093
Name
(RefSeq) Prp31-15.5k-U4 Snrna Complex family protein
KO
K12845
U4/U6 small nuclear ribonucleoprotein SNU13
Organism
tgo
Toxoplasma gondii
Pathway
tgo03008
Ribosome biogenesis in eukaryotes
tgo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tgo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
TGME49_236580
09122 Translation
03008 Ribosome biogenesis in eukaryotes
TGME49_236580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tgo03041
]
TGME49_236580
03009 Ribosome biogenesis [BR:
tgo03009
]
TGME49_236580
Spliceosome [BR:
tgo03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
TGME49_236580
Ribosome biogenesis [BR:
tgo03009
]
Eukaryotic type
Sno RNPs
Box C/D snoRNPs
TGME49_236580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_L7Ae
RNase_P_pop3
PELOTA_1
DUF2985
Lantibiotic_a
Motif
Other DBs
NCBI-GeneID:
7899087
NCBI-ProteinID:
XP_018635791
UniProt:
A0A125YFG8
LinkDB
All DBs
Position
X:complement(join(5435922..5436080,5436516..5436619,5437495..5437780))
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AA seq
182 aa
AA seq
DB search
MCRLSTGSPLTLSVGIWFLLACRWISKSLGCSGRFDFFREKHSQICIALFKMSGENDGDV
SSKAYPLASLEVTNQILDIVQQACSYKQLRKGANEATKTLNRGTAEIVILAADAEPLEIL
LHLPLLCEDKNVPYVFVRSKVALGRACGVSRPVISCSITNKEGSALNPQIAELKNIIEMM
LI
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atgtgtcgattgtcaacgggttctccgctgaccctctctgttgggatttggttcttgctt
gcgtgcaggtggatttccaagtcactgggttgttcaggcagattcgattttttcagggag
aaacattcgcaaatctgtatcgcgcttttcaagatgtcgggcgagaacgacggagacgtg
agctcgaaagcgtacccgctcgcttcgcttgaggtgacaaaccaaattttggatatcgtg
cagcaggcctgcagctacaagcagctgagaaaaggagccaatgaagcaacaaagactctg
aacagaggaactgctgagatcgtcattctggcggcggacgcagagcccctggaaattctg
ctgcaccttccgctgctctgtgaagacaagaacgtcccgtatgttttcgtcaggagcaag
gttgctcttgggcgcgcttgtggagtttctcgccctgtcatttcgtgctccatcaccaac
aaagaaggttccgcgctgaacccgcagattgcagagctcaagaacatcattgaaatgatg
ctcatctag
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