Toxoplasma gondii: TGME49_305770
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Entry
TGME49_305770 CDS
T01093
Name
(RefSeq) ABC transporter, ATP-binding domain-containing protein
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
tgo
Toxoplasma gondii
Pathway
tgo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tgo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TGME49_305770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tgo03019
]
TGME49_305770
Messenger RNA biogenesis [BR:
tgo03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
TGME49_305770
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Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
Dynamin_N
AAA_29
MMR_HSR1
RsgA_GTPase
AAA_28
AAA_23
AAA_25
AAA_15
AAA_24
Motif
Other DBs
NCBI-GeneID:
7901300
NCBI-ProteinID:
XP_018636150
UniProt:
A0A125YYQ3
LinkDB
All DBs
Position
IX:join(5559353..5559913,5560478..5560577,5560958..5561426,5561837..5561983,5562527..5562633,5563163..5563170)
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AA seq
463 aa
AA seq
DB search
MSPSPSLPESSNACNGVSEELGGPPPSSAASSACPPQSASPSLFPASSESREEAPVVRCR
HLRYSYQVPSRQRPLSTECTDSCQLLPPSGVCLSTEFLDSMALAASSVDAEGTTSAGERG
ARQGRGEENRGAGGHGEEGREREEAGGQREYQLFDVSLEIPKGARVVVIGSNGAGKSTLL
NILGGKMLIPEGMAFVLGRPAFHDVSLGRDVVCLSEWWKGDFALDVPLYDLVGPVVEAHI
QEKMEKKRDASLAPDQAECRRPRGFWSRLFYDEGLFSPLPCCSSSSASSPASASASASAT
AGEGERERLGEEECVVSRVRRLVTLLGVDMRWRIARISDGERRRCQLLAALCEPRKVYIL
DEATSDLDLVSREGLLRLLLHESSRRGATVLYSTHIFDGLDEWATHLLYMRKGRLHLYRP
LSELPALEELRRSGHSAPLYALARQWLFEEWQHQPQLLALQRL
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgtcgccgtctccctctctgcccgagagctccaacgcatgcaatggagtctctgaagag
ctgggcggtcctcctccctcctcggccgcctcctcggcctgccctccccagtctgcttct
ccctcgctctttcctgcttcctccgaaagccgtgaggaagcgcctgtcgttcgatgcaga
cacctgcgctactcataccaggtcccgtcgcggcagcggcctctcagcacggagtgtaca
gacagctgccagttgctgccgccgagcggggtctgtctgagcaccgagtttctcgactcc
atggctctcgctgcttcttccgtcgacgccgaaggaacgacgtccgcaggagagagaggc
gctcgacagggcagaggcgaggaaaaccgaggagcgggaggacatggagaagaagggaga
gaaagggaagaagcgggaggacagagagagtatcagctgttcgacgtatcgctggaaatc
cccaagggtgcgagagtcgtcgtcattggaagcaacggagcagggaagagcactctcctc
aacatcctggggggcaaaatgctcatcccagaaggaatggctttcgtgctcggtcgccct
gcgttccacgacgtatccctcggccgcgacgtcgtctgtctgagcgaatggtggaaagga
gacttcgctctggatgtaccgctgtacgacctcgtcggtcccgtcgtcgaggcccatatt
caggagaagatggagaagaagcgcgacgcttctctcgcgccagaccaggcagagtgtcgt
cgccctcgcggcttctggagtcgtctcttctacgacgaaggcttgttctcgccgctcccc
tgctgttcttcgtcgtctgcgtcttcgcctgcgtcggcgtctgcgtcggcgtctgcgact
gcaggagagggtgaacgtgagagactgggcgaggaggagtgcgtcgtgagtcgcgtccga
cggctggtgactctgctgggagtcgacatgcgctggcgaatcgcgcggataagtgacggc
gagagacgcagatgccagttgctcgcagctctctgtgaaccgaggaaagtgtacattctc
gacgaggctacgagcgacctcgacctcgtctcccgagagggccttctccgccttctgctg
catgagtcgtcgcgccgtggtgcgactgtgctctactccacgcatattttcgacggcctc
gatgagtgggcgacgcaccttctctacatgcgaaagggaagacttcatctctaccggcct
ctctctgagctcccggcacttgaggaactgcggcgatctggacactctgcgccgctctac
gccctcgcgcgccagtggcttttcgaagagtggcaacaccagcctcagcttcttgctctc
cagcgtctctga
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