Tinamus guttatus (white-throated tinamou): 104573948
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Entry
104573948 CDS
T08560
Symbol
APAF1
Name
(RefSeq) apoptotic protease-activating factor 1
KO
K02084
apoptotic protease-activating factor
Organism
tgt
Tinamus guttatus (white-throated tinamou)
Pathway
tgt04115
p53 signaling pathway
tgt04210
Apoptosis
tgt05164
Influenza A
tgt05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
tgt00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
104573948 (APAF1)
04115 p53 signaling pathway
104573948 (APAF1)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
104573948 (APAF1)
05168 Herpes simplex virus 1 infection
104573948 (APAF1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_IFT122_1st
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
APAF1_C
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
EIF3I
WDR55
Beta-prop_TEP1_2nd
WD40_Gbeta
Beta-prop_CAF1B_HIR1
WHD_APAF1
Beta-prop_WDR36-Utp21_1st
NB-ARC
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_EML
WDR90_beta-prop_4th
CFAP251_N
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_RIG_2nd
CARD
WD40_MABP1-WDR62_1st
DSE1_N
Beta-prop_TEP1_C
Beta-prop_WDR41
Beta-prop_Aladin
Beta-prop_IFT140_1st
Beta-prop_NOL10_N
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
Beta-prop_Vps41
CARD_2
Beta-prop_DCAF4
ASA1
WD40_RFWD3
Ge1_WD40
Beta-prop_NWD2_C
Beta-prop_VPS8
WD40_like
Beta-prop_HPS5
eIF2A
PEP5_VPS11_N
Beta-prop_DCAF12
Tricorn_2nd
WDR54
Beta-prop_ACSF4
AAA_16
Beta-prop_WDR11_2nd
nSTAND6
WHD_Dark
AAA_22
PAC11
LRRC37
Motif
Other DBs
NCBI-GeneID:
104573948
NCBI-ProteinID:
XP_010219487
LinkDB
All DBs
Position
Unknown
AA seq
1228 aa
AA seq
DB search
MDMKSRNYLLLNRQALEKDIKTSYIVDHMIADGVLTLEEEEEVKQQNTQKKRAAMLINII
LKKDNNSYRSFYNALLHEGYRDLAALLQDGIPVFSAGNGKSSVDEMTSYVKMILSEGGVP
QRPVVFVTRPKLVDAIKQKLYCLGSDPGWVTVYGMAGCGKTVLTAEALRDHRLLEDYFPK
GVHWISVGKQDKAGLLMKLQNLCSRLEHDSTLSQRPPLNIEEAKDRLRLLMLRKYPRSLL
VLDDIWDSWVLKAFDNQCQILITSRDRSVTDAVAGNKYEVHVESGLAHEKGLEVLSLFVN
KKITELPEQADCIVRECKGSPLVISLIGALLRDFPGRWEYYLKQLQNKQFKRIRKSSSYD
YEALDEAMSISVEQLNENIKDYYKDLSILPKDVKVPTKVLCILWDMETEEVEDILQEFVN
KSLLFCDRNGKSFHYYLHDLQLDFLTEKNRNQLQELHKNIVNQYKKYYKLNMPVPSQEDC
MYWYNFLAYHMAGANMQEELCDLMFSLDWIKAKTELVGPAHLIHEYVEYSSVLDQKNSIV
RENFQEFLSLNGHLLGRQPFPDIIQLGLCQLETSKVYQQAKLLAQQEAGILYLEWINKKS
MKNLSRLVVRPHRDAVYHACFSQDRQRIASCGADKTLQVFKAESGERLLEIQAHDDEIFC
CAFSADGAFVATCSADKKVKVWNSRTGQCMRVYEEHTEQVNCCQFNNRSGQHLLATCSND
TFIKLWDLNRQYCRNTMFGHVNSVNHCKFSPNDEYVASCSTDGTVKLWEVCSANELKTIE
IKDFFRTADEQPDDVEILVKCCSWSRNSATVLVVAKNKLLLFDVKTSDLLKQVVVSHHSM
IQYCDFCPGDELVAVALSHCSVELWNIKSLSKVADCRGHMSWVHCVTFSPDGSLFVTSSD
DQTIRIWETNKVCKSSDAVLKSELDVVFHNDKVMILAIYNQQHLQLINGNKNSIFAAFGQ
ENGTIKVLQLSDGKVLKTLNAYRASVQHCQFTSDCQTLISSAHDSVIQVWRWQLNERVFL
RGHKEAVKDFRLLDNSKLLSWSFDGTVKVWNIMTGKAEKDFTCHGDTVLSCAVSPDGSKF
SSASADKTAKIWSFESSSVLHELNGHEACVRCCAFSSDNKFLATGDDKGEIRIWDALTGE
LLHYFSPVTVDEGEPTHGGWVTDLSFSPDSKMLVSCGGYLKWWNVTTGESLQTFYTNGTN
LKSIHVSPNFDIYVTVDNLGILYVLQKM
NT seq
3687 nt
NT seq
+upstream
nt +downstream
nt
atggatatgaagagtagaaattatctacttttgaatcgtcaagcattggaaaaagacatc
aagacctcatacattgtggatcatatgattgctgacggagtattgactttagaggaggaa
gaggaagtaaaacaacagaatactcagaagaagcgagcagctatgctaataaacattatc
cttaaaaaagataataattcgtatagatctttctataatgcactacttcatgaagggtac
agagatctcgctgcactacttcaggatggcatccctgtcttctctgcgggtaatgggaag
agttctgtggatgaaatgacttcatatgttaagatgatcctcagcgaaggaggtgtgcca
cagagaccagttgtgtttgttactcgcccaaagctggtagatgccattaagcagaaactc
tactgtttgggaagtgatccaggttgggtcacagtttatggaatggcaggttgtggcaag
acagttctaacagcagaagctttaagggatcaccgactcttggaagattattttccaaaa
ggagttcactggatatctgttggaaaacaggacaaagcagggctcctaatgaaactccag
aatctctgtagtaggttagagcacgacagtaccctttcacaaagaccaccccttaacatt
gaggaggctaaagatcgtcttcgtttgctgatgctacgcaaataccccaggtctcttttg
gtcttggatgatatttgggattcctgggtgttaaaagcatttgataatcagtgtcagatt
cttattaccagcagggacaggagtgtaacagatgcagtggctggcaataaatatgaggtt
catgtagaaagtggattagcacatgagaaggggctggaggtcttgtccctgtttgtgaat
aagaaaataaccgaactgccagaacaagctgattgcattgtaagggaatgcaaaggttct
cctcttgtgatatccttgataggtgctttattacgagacttccctggtcgttgggaatac
tacctcaaacagctgcagaataagcaattcaaaagaataagaaaatcatcatcttatgat
tacgaagctcttgatgaagcaatgtccataagtgttgaacaactgaatgaaaacattaag
gactattacaaggacctttccatcctcccaaaagacgttaaagttcctactaaggttctc
tgtattctttgggatatggaaactgaagaagttgaagatatcttacaggaatttgttaac
aaatcactgttgttctgtgatcgtaatgggaagtcgttccattattatttacatgatctt
caacttgactttcttacagagaagaatcgcaatcagcttcaggaactacataaaaacata
gtaaatcagtacaaaaaatattacaagcttaatatgcctgttccatctcaagaggattgc
atgtactggtataactttctagcatatcatatggcaggtgccaacatgcaggaggaactc
tgtgatcttatgttttctctggattggattaaagctaaaacagagttggtaggccctgcc
catctgattcacgaatatgtagaatatagttcagtcctggatcaaaagaatagcatagta
cgtgagaacttccaggaatttctgtctttaaatgggcaccttcttggacgacaaccattt
cctgacataatacagctgggtctttgtcaactggagacatcaaaggtctatcaacaagca
aagctacttgctcaacaagaagcaggcatactttatttggagtggataaataagaagtcc
atgaaaaacctctcccgtctggtagttcgtccacacagagatgcagtgtaccatgcatgc
ttttctcaggatagacaaagaatagcatcgtgtggagctgataaaacactacaggtgttc
aaggcagaaagtggagagagacttctggagatacaggcacatgacgatgagatattttgt
tgcgcgttctctgcagatggtgcctttgtagcaacttgttcagctgataaaaaagtgaag
gtctggaattcaagaacgggtcaatgtatgcgtgtgtatgaggaacacacagaacaggtc
aattgctgccaatttaataacagaagtggtcagcatcttttagccacctgctcaaatgac
actttcatcaaactttgggatttgaacagacaatattgtagaaatacgatgtttggtcat
gtcaattctgtgaatcattgcaaattttcaccaaatgatgaatatgttgctagctgctca
acagatggaacagtaaagctttgggaagtgtgctctgcaaatgaacttaaaaccattgag
ataaaagatttcttcagaactgcagatgagcaaccagatgatgtggagatcttagttaag
tgttgctcttggtcacgaaatagtgccacagttttggtggtagccaaaaataagctcctg
ctctttgatgttaaaacaagtgatctattaaagcaagtcgtcgtaagtcatcacagtatg
atccaatattgtgacttctgccctggtgatgagttagtagcagttgctttatctcactgc
tctgtagagttatggaatattaaatcattatcaaaagtagcagattgcaggggacacatg
agctgggttcattgtgtgacattttctccagatggatctttatttgtcacatcctctgat
gatcagacaatacggatttgggaaacaaacaaggtgtgcaagtcttctgatgctgtgctg
aaaagtgaacttgatgtggtattccacaatgataaagtgatgattttagcaatttacaat
cagcagcatttacaacttattaatggaaataaaaacagcatttttgccgcatttggacag
gagaatggaacaataaaggtactacagttgtcggatgggaaagttttgaaaaccttgaac
gcctaccgggcatctgtgcagcattgccagtttacctctgactgtcagactcttatttca
agtgctcatgattcagtaatacaggtatggagatggcagttgaatgagcgtgtgtttcta
agagggcacaaagaagcagtcaaggattttagacttctggataattcaaaacttctttct
tggtcatttgatggaactgttaaggtgtggaatatcatgactggaaaagcagaaaaagat
tttacttgccatggagatacagttctttcttgcgctgtttcacctgatggcagcaagttt
tcatctgcttctgctgacaaaactgcaaagatatggagttttgaaagctcttctgttcta
catgagctgaatggtcatgaagcctgtgtgcgatgctgtgctttctcttctgataacaaa
ttcctagccactggagatgacaaaggcgaaataaggatttgggatgccttaacaggagaa
ttacttcactacttctccccagttactgtagatgaaggagaaccaacccatggtggctgg
gtaacagacctctcattttctcctgacagtaagatgcttgtgtcatgtggaggctatctt
aagtggtggaatgtaactactggagaatccttacaaaccttctacacaaatggaacaaac
ctcaagtcaatacatgtgtcccctaacttcgacatttatgtgactgttgataaccttggt
attctttatgtattacaaaagatgtga
DBGET
integrated database retrieval system
