Tinamus guttatus (white-throated tinamou): 104576471
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Entry
104576471 CDS
T08560
Symbol
KDM2A
Name
(RefSeq) lysine-specific demethylase 2A
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
tgt
Tinamus guttatus (white-throated tinamou)
Pathway
tgt03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
tgt00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
104576471 (KDM2A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tgt03000
]
104576471 (KDM2A)
04121 Ubiquitin system [BR:
tgt04121
]
104576471 (KDM2A)
03036 Chromosome and associated proteins [BR:
tgt03036
]
104576471 (KDM2A)
Enzymes [BR:
tgt01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
104576471 (KDM2A)
Transcription factors [BR:
tgt03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
104576471 (KDM2A)
Ubiquitin system [BR:
tgt04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
104576471 (KDM2A)
Chromosome and associated proteins [BR:
tgt03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
104576471 (KDM2A)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
104576471 (KDM2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
F-box-like
JHD
F-box
JmjC
Cupin_8
Cupin_1
LRR_4
Motif
Other DBs
NCBI-GeneID:
104576471
NCBI-ProteinID:
XP_010222158
LinkDB
All DBs
Position
Unknown
AA seq
969 aa
AA seq
DB search
MEPEEERIRYSQRLRGTMRRRYEDDGISDDEIEGKRTFDLEEKLSTNKFNSTFVVFMEGK
DFTVEYIQRGGLRDPLIFRSSDGLGIKMPDPDFSVNDVRLCVGSRRMVDVMDVNTQRDIE
MSMAQWARYYETPEAEREKLYNVISLEFSHTKLENLVQRPATVDLIDWVDNMWPRHLKES
QTESTNAILEMQYPKVQKYCLMSVKGCYTDFHVDFGGTSVWYHIHRGGKIFWLIPPTPQN
LELYENWLLSGKQGDIFLGDRVSECQRIELKQGYTFVIPSGWIHAVYTPMDTLVFGGNFL
HSFNIPMQLRIYSIEDRTRVPNKFRYPFYYEMCWYVLERYVYCITSRSHLTKDFQKESLS
MDMELSSSDSVNMEEEEEEEEEEEDAAGKEPRRPVTRRSVLTSPVANGANADYDELGRSC
RSSLPPLLKKSPSVDSSDSSRASQNGQAWEPHGGSPNKSRKVHLTQFELEGLRCLVDKLE
SLPLHKKCVPTGIEDEDALIADVKLKLQARLRVRLPTIPITKPHTMKPTPRPTPVRPTVS
PIVSGARRRRVRCRKCKACMQGECGMCHYCRDMKKFGGPGRMKQSCVLRQCLAPRLPHSV
TCALCGEVDQNEDSQDFEKKLMECCICNEIVHPGCLQMDGEGLLNDELPNCWECPKCYQG
DDTEKGQVRRELRGGGGVSCIPLAHHGRGGRAAEGEESWMQREVWMSVFRYLSRRELCEC
MRVCKTWYKWCCDKRLWTKIDLSRCKSITPQALSGIIKRQPVSLDLSWTNISKKQLTWLV
NRLPGLKDLILAGCSWSAVCALSTSSCPLLRTLDLRWAVGIKDPQIRDLLTPPTDKPSQD
NRSKLRNMIDFRLAGLDITDATLRLIIRHMPLLSRLDLSHCNHLTDQSANLLTAVGSSTR
NSLTELNMAGCNKLTDQALLYLRRISNVTLIDLRGCKQITRKACEHFISDLSINSLYCLS
DEKLIQKIS
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atggagcctgaggaagaaaggatccgttacagccaaagactgcgtggcaccatgaggcga
cgttacgaggatgatggaatctccgatgatgaaatcgaagggaagaggacgtttgacctc
gaggaaaagctctccaccaacaagtttaactccaccttcgtggtcttcatggaaggcaaa
gacttcacagttgaatacatccagcgaggtggcctgagagatcctctcattttcaggagc
tccgatggcttggggataaagatgccagatccggacttcagcgtgaacgatgtgcggctg
tgtgtcgggagtcggcgcatggtggacgtcatggatgtgaacacacagagggacattgag
atgtccatggcacagtgggcacgctactacgaaacgccggaggctgagcgagagaaactg
tacaatgtcatcagcctggaattcagccacaccaagctggagaacctggtgcagagacct
gctacggtggatttgattgactgggttgacaatatgtggcccaggcacctgaaggagagt
cagacggagtctacaaatgctatcctggagatgcagtatcccaaagtgcagaagtactgt
ttgatgagcgtcaaggggtgctacacagattttcatgtggactttggtggcacttctgtg
tggtaccatattcaccgagggggaaagatcttctggctgattccgcctacgccccagaat
ctggagctctatgaaaactggcttctctccggaaagcagggagacatctttcttggggac
agagtgtccgagtgccagcgaattgagctcaagcagggctacacgtttgtcatcccctca
ggttggatccatgctgtgtacactcccatggacacactggtttttggaggcaacttcttg
cacagcttcaacatccccatgcagctgcggatttacagcattgaagaccgcacacgggtc
cccaataaatttcgttatcccttctattatgagatgtgttggtacgtgctggagcgctac
gtctactgcatcaccagccgctcacatctgaccaaggacttccagaaggaatcgctcagt
atggatatggagctgagctcttcagactcggtgaacatggaggaagaggaggaggaggag
gaggaggaagaggatgcagcagggaaggaacccaggcgaccagtcacaaggcggtctgtt
cttaccagccccgtagccaatggtgccaatgcggactatgatgaactgggcaggagctgc
cggagcagcctgccgccgcttctgaagaagtccccatctgtagactcctctgactccagc
cgggcttcccaaaacggccaggcctgggagccacacggcggcagcccaaacaagagcagg
aaagttcacctgacgcagttcgagctggaggggctgcgctgcctcgtggacaagctggag
tcgctccctctgcacaagaagtgtgtccccaccggcatcgaggacgaggatgccctcatt
gctgatgtcaagctgaagctccaggcccggctgcgggtccgcctgcccaccatacccatc
accaagcctcacaccatgaagccaaccccccgcccaacacccgtcaggcccacggtctcg
cccatcgtgtcgggagccaggcggaggcgcgtgaggtgccggaagtgcaaggcttgcatg
cagggcgagtgtggcatgtgccactattgcagggatatgaagaaatttggtggacctggt
cggatgaagcagtcctgcgtcctccgacagtgcttagcgcctaggctgcctcactcagtc
acttgtgcactttgtggggaggtggatcagaatgaagactcgcaggactttgagaagaag
ctcatggagtgctgcatctgcaatgagatcgtccaccctggctgcctgcagatggacggg
gaagggctgctcaacgacgagcttcccaactgctgggagtgtcccaagtgctaccagggc
gacgacactgagaagggccaggtacgacgtgagttacggggcggaggtggcgtgtcctgc
atcccgctggcgcatcacggcagaggcggccgggcggcggagggcgaggaaagctggatg
cagcgggaggtgtggatgtcggtgttccgctacctctcccgcagggagctctgcgagtgc
atgcgggtgtgcaagacctggtacaaatggtgctgtgacaagagattgtggacaaagata
gacttgagcaggtgcaaatccatcaccccccaggcactgagcggcatcatcaaaagacag
cccgtcagcctcgacctcagctggaccaatatctccaaaaaacagctcacgtggcttgtc
aacaggctgccgggcctgaaagacctcatcctcgcgggctgttcctggtctgcggtctgt
gctctcagtacctccagctgcccccttctcaggaccctcgatcttcggtgggcagtagga
atcaaggaccctcagatccgggacttgcttacgcctccaacagacaaacccagtcaggac
aatcgcagcaaactccgcaacatgatcgacttccggctagccggcctggacatcacggac
gccacgctgcggctcatcatccgccacatgcccctgctctcccgcctcgacctcagccac
tgcaaccaccttacggaccagtcggccaacctcctaacggccgtgggctcttccacacgc
aattccctcaccgagctcaacatggcaggctgcaataagctgacagatcaggccctgctg
tacctgcgacgtatctccaacgtcactctcattgacctacgaggttgcaaacagatcacc
cgcaaagcctgtgagcacttcatctcggacctgtccatcaacagcctctactgcctatcc
gatgagaagctgatccaaaaaatcagctag
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