Tinamus guttatus (white-throated tinamou): 104577990
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Entry
104577990 CDS
T08560
Symbol
LSM3
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm3
KO
K12622
U6 snRNA-associated Sm-like protein LSm3
Organism
tgt
Tinamus guttatus (white-throated tinamou)
Pathway
tgt03018
RNA degradation
tgt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tgt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104577990 (LSM3)
09123 Folding, sorting and degradation
03018 RNA degradation
104577990 (LSM3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tgt03019
]
104577990 (LSM3)
03041 Spliceosome [BR:
tgt03041
]
104577990 (LSM3)
Messenger RNA biogenesis [BR:
tgt03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
104577990 (LSM3)
mRNA degradation factors
5'-3' decay
Lsm complex
104577990 (LSM3)
Spliceosome [BR:
tgt03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
104577990 (LSM3)
Complex C
U2 snRNP components
104577990 (LSM3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Peptidase_M16_M
TIG_SUH
vATP-synt_E
Motif
Other DBs
NCBI-GeneID:
104577990
NCBI-ProteinID:
XP_010223819
LinkDB
All DBs
Position
Unknown
AA seq
180 aa
AA seq
DB search
MPFGTVKSGPFCSGKPPDARFTPGKPSGKRPQRSGTSRDEAASRARARAGPPQGPGSAQL
SEGGCIPRALPPNLLPASLTRAPRSGRRDGALARSSRPRRDLSAAGLYLNFAKDNKLASF
LQAYDQHLNMILGDVEETVTTIEIDEETYEEIYKSTKRNIPMLFVRGDGVVLVAPPLRVG
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atgccctttgggactgtgaagagcggcccattctgttcgggaaagcccccagatgctcgt
ttcacccctggaaaacctagcgggaagcgtccccagaggagcgggacaagccgggatgag
gcggcgtcacgagcgcgcgccagggccggccccccgcagggccccgggagcgcgcagctc
tccgagggcggctgcatcccccgggcgctgcctccaaacctcctcccggcctcactgaca
cgagccccgcggagtggccggcgggacggggcgctcgctcggagctcgaggccgcggcgg
gatctcagcgctgccggcttgtatttgaactttgcaaaagataataaactagcttcattc
ttacaggcatatgatcaacatctaaatatgattttgggggatgtggaagaaactgtaaca
acaatagagattgatgaagaaacatatgaagaaatttataaatctaccaaaaggaatatt
ccgatgctctttgtcagaggtgacggcgttgtgcttgtagctcccccgttgagggttggc
tga
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