Tinamus guttatus (white-throated tinamou): 104578512
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Entry
104578512 CDS
T08560
Symbol
THBS1
Name
(RefSeq) thrombospondin-1
KO
K16857
thrombospondin 1
Organism
tgt
Tinamus guttatus (white-throated tinamou)
Pathway
tgt04115
p53 signaling pathway
tgt04145
Phagosome
tgt04148
Efferocytosis
tgt04350
TGF-beta signaling pathway
tgt04510
Focal adhesion
tgt04512
ECM-receptor interaction
tgt04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tgt00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
104578512 (THBS1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104578512 (THBS1)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
104578512 (THBS1)
04148 Efferocytosis
104578512 (THBS1)
09143 Cell growth and death
04115 p53 signaling pathway
104578512 (THBS1)
09144 Cellular community - eukaryotes
04510 Focal adhesion
104578512 (THBS1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
104578512 (THBS1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tgt04131
]
104578512 (THBS1)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
tgt00536
]
104578512 (THBS1)
Membrane trafficking [BR:
tgt04131
]
Endocytosis
Phagocytosis
Opsonins
104578512 (THBS1)
Glycosaminoglycan binding proteins [BR:
tgt00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
104578512 (THBS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSP_C
TSP_3
TSP_1
TSP1_spondin
VWC
TSP1_CFP_C
EGF_3
cEGF
TSP1_ADAMTS
Laminin_G_3
TSP1_CCN
EGF
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
104578512
NCBI-ProteinID:
XP_010224375
LinkDB
All DBs
Position
Unknown
AA seq
1165 aa
AA seq
DB search
DSISVAKRAAESRGDDNSVFDLFELIGFIRKGAGRRAPGVHLVKGPESSSPAYRIEDASR
IPAVPDDKFQDLLDAIHAEKGFILLANLRQAKKSRGTLLAVEQKDGSGHVFSLVSNGKAG
TLDLSLTAEGGKQHIVSVEDALLATGHWKNITLFVQEDRAQLYVGCEKMENAELDIPIQN
IFTRDLASSARLRIAKGGVNDNFQGLLQNVRFVFGTTLETILRNKGCSSATSAIITLDNP
INGSSPAIRTNYIGHKTKDLQAVCGFSCDELTNMFVELQGLRSMVTTLQDRVRKVTEENE
LIAKVVQITPGVCIHNGVLHKNKEEWTIDSCTECTCQNSATICQKISCPLMPCSNATVPD
GECCPRCWPSDYADDGWSPWSEWTSCSVTCGNGIQQRGRSCDSLNNRCEGSSVQTRTCHL
QECDKRFKQDGGWSHWSPWSSCSVTCGTGMITRIRLCNSPVPQLNGKPCEGEARETKSCQ
KDPCPINGNWGPWSPWDVCTVTCGGGLQKRSRLCNNPEPQYGGKTCVGEAKGTQVCNKQD
CPVDGCLSNPCFAGTTCTSSPDGSWKCGACPAGYHGDGVHCQDIDECKEVPDACFVFNGV
HRCENTEPGYNCLPCPPRFTGTQPFGRSVEDAMANKQVCKPRNPCTDGTHDCNKNAKCNY
LGHFSDPMYRCECKPGYAGNGIICGEDTDLDGWPNENLVCVANATYHCKKDNCPNLPNSG
QEDYDKDGIGDACDNDDDNDSIPDDRDNCPFIYNPQQYDYDRDDVGDRCDNCPYNHNPDQ
IDTDNNGEGDACAVDIDGDGVLNEMDNCQYVYNVDQRDTDLDGVGDQCDNCPLEHNPDQE
DSDSDRIGDECDNNQDIDEDGHQNNLDNCPYVPNANQADHDKDGKGDACDHDDDNDGIPD
DKDNCRLVANPDQADSDGDGRGDACKDDFDQDSVPDIDDICPENVDISETDFRRFQMIPL
DPKGTSQNDPNWVVRHQGKELVQTVNCDPGLAVGFDEFNAVDFSGTFFINTERDDDYAGF
VFGYQSSSRFYVVMWKQITQSYWDSTPTKAQGYSGLSIKVVNSTTGPGEHLRNALWHTGN
TPGQVRTLWHDPRHIGWKDFTAYRWRLSHRPKTGYIRVVMYEGKKIMADSGPIYDKTYAG
GRLGLFVFSQEMVFFSDLKYECRDP
NT seq
3500 nt
NT seq
+upstream
nt +downstream
nt
gggacagtatctctgtggccaagcgggctgcagagtcaaggggagatgataacagcgtgt
tcgatctctttgagctcatcggctttattcgcaagggagccgggcgccgggcgcccgggg
tgcacctggtgaagggaccagagtcttccagccctgcttaccgtattgaagatgccagcc
gcatcccggccgtccctgacgacaagttccaagacttgctagacgccatccatgctgaga
agggcttcatccttctggccaatctccggcaagccaagaagagtaggggcacactgctgg
ccgtggaacagaaagatggctctggccacgtcttcagtctagtatccaacggcaaggcag
gcaccctggacctgagccttactgctgagggtggcaagcaacatatagtgtcagtagagg
atgccttgctggctacaggacactggaagaatatcaccctgtttgtgcaggaggatcggg
ctcagctctatgtgggctgtgagaagatggaaaatgcagaactggacatccccatccaga
acatcttcactagggatctggctagcagtgccaggctccgtattgccaaaggaggagtca
acgataacttccagggactgctgcagaacgtgcggtttgtgtttggaacaactctggaaa
ccatcctgaggaacaagggctgctccagtgccacgagcgcgatcattacgttggacaacc
ccatcaatggttccagcccagctatccgcaccaattacattggccataaaacgaaggatc
tccaagcagtctgtggcttttcctgtgatgagctaacaaacatgtttgtggaactgcaag
ggctacggtccatggttaccacacttcaagacagagtgcgcaaagtgactgaggaaaatg
aactgattgctaaagtggtccagatcactcctggagtatgcattcacaatggggttttgc
acaaaaataaagaagagtggactattgacagctgcactgaatgtacttgccagaactctg
ccactatatgccagaaaatctcatgccctctaatgccttgctccaatgccaccgttcctg
atggagagtgctgccctcgatgctggcctagcgactatgctgatgatggatggtcgcctt
ggtctgaatggacatcgtgttctgtgacctgtgggaatgggattcagcagcgaggacgct
cctgtgacagcctcaataaccgctgtgaagggtcttctgtgcaaacacgaacttgccacc
ttcaggagtgtgataagaggtttaaacaggacggtggctggagccactggtcaccatggt
catcatgttctgtcacttgtggcacgggcatgatcactagaattcgtctctgcaactctc
cagtaccacagctgaatgggaaaccttgtgagggtgaagcaagagaaaccaaatcctgcc
agaaagatccttgcccaattaatggcaactgggggccatggtctccatgggatgtctgca
ctgtcacatgtggtggaggacttcaaaagcgcagtcgtctctgcaataacccagaacctc
agtatggggggaagacttgtgtaggtgaagccaaagggacccaggtctgcaacaaacagg
actgcccagttgatgggtgtctgtctaatccttgctttgcgggaacaacatgtaccagct
cccctgatggctcctggaagtgtggagcctgtccagctggctaccatggtgatggtgtcc
actgccaggatattgatgagtgcaaagaggttcctgatgcctgctttgtcttcaatggag
tgcacaggtgtgagaacactgaacctgggtacaactgcctgccttgtcctccgcgtttca
ctgggacacagccgtttggccgcagcgttgaggatgccatggctaacaagcaggtttgca
agccacgcaatccctgcacagatggaacacatgactgcaacaagaatgccaaatgcaatt
atcttggccacttcagtgaccctatgtatcgctgtgaatgtaaacctggctatgctggca
atggcatcatatgtggggaagatactgacttggatggatggccaaatgaaaaccttgtct
gtgttgccaatgccacttaccactgtaaaaaagacaactgccccaatctgccaaactctg
ggcaggaagactatgataaggatgggattggtgatgcctgtgacaatgatgatgataatg
atagtattcctgatgaccgggacaactgtccattcatctacaacccacagcagtatgact
atgacagggatgatgttggtgaccgctgtgataactgcccctacaatcacaaccctgacc
agatcgacactgacaacaacggagaaggagatgcctgtgcagtggatattgatggagatg
gtgttcttaatgaaatggacaactgccagtatgtctacaatgtagaccagagggatacag
acttggatggagttggagatcagtgtgacaactgtccactagaacacaatcctgaccagg
aagattcagactctgaccgtataggtgatgaatgtgacaacaaccaggacatagatgaag
acggtcatcaaaataaccttgataactgcccctatgtgcccaatgctaatcaagctgacc
atgacaaggatggaaaaggcgatgcctgtgaccatgatgacgacaatgatggcatccctg
atgacaaggataactgcagactggttgccaacccagatcaagctgattctgatggtgatg
gacgtggagatgcttgcaaagatgactttgaccaagatagtgtgccagacattgatgaca
tctgccctgaaaatgtggacattagtgagactgatttccgacgattccagatgattcccc
tggatcccaagggaacatcccaaaatgatcccaactgggtggttcgtcaccagggcaaag
aactggttcagacagtcaactgtgatcctggacttgcagtgggttttgatgaattcaatg
ctgtggacttcagtggcacattcttcatcaacacagaaagagatgatgattatgctggct
ttgtatttggctaccaatccagcagtcgtttctatgttgtcatgtggaagcagatcaccc
agtcctactgggactctacgccaaccaaagctcagggctactcaggtctctccatcaaag
tagtgaattccaccacaggtccaggagaacatcttcgtaatgctctgtggcacacaggaa
acactccagggcaggtgagaactttgtggcatgaccctcgtcacataggctggaaagact
tcacagcgtacagatggcggcttagccatagaccaaagactggctacatcagggttgtaa
tgtatgaagggaaaaagatcatggcagactcgggaccaatctatgataaaacctatgctg
gtggtcggctaggattatttgtcttctctcaagaaatggtgttcttctcagatcttaaat
atgaatgcagagacccataa
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