Tinamus guttatus (white-throated tinamou): 104578779
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Entry
104578779 CDS
T08560
Symbol
EFTUD2
Name
(RefSeq) LOW QUALITY PROTEIN: 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
tgt
Tinamus guttatus (white-throated tinamou)
Pathway
tgt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tgt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104578779 (EFTUD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tgt03041
]
104578779 (EFTUD2)
Spliceosome [BR:
tgt03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
104578779 (EFTUD2)
Complex C
U5 SnRNP specific factors
104578779 (EFTUD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_IV
EFG_C
EFG_III
GTP_EFTU_D2
EFL1
Septin
FANCL_d3
Motif
Other DBs
NCBI-GeneID:
104578779
NCBI-ProteinID:
XP_010224688
LinkDB
All DBs
Position
Unknown
AA seq
952 aa
AA seq
DB search
MDTDLYDEFGNYIGPELDSDDDDDELGREAKDLDELEDDDDDDDMGDHDEDHPGMEVVLH
EDKKYYPTAEEVYGPEVETIVQEEDTQPLTEPIIKPVKTKKFSLMEQTLPVTVYEMDFLA
DLMDNSELIRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKRYDQDLCYTDILFTEQERGVG
IKSTPVTIVLPDTKGKSFLFNIIDTPGHVNFSDEVTAGLRISDGVVLFIDAAEGVMLNTE
RLIKHAVQERLAVTVCINKIDRLILELKLPPTDAYYKLRHIVDEVNGLISMYSTDENLVL
SPLLGNVCFSSSQYSICFTLGSFAKIYADTYGDINYQEFAKRLWGDIYFNPKTRKFTKKA
PTSSSQRSFVEFILEPLYKILAQVVGDVDTTLPRTLDELGIHLTKEELKLNIRPLLRLVC
KKFFGEFTGFVDMCVQHIPSPKVGAKTKIEHTYTGGVDSDLGEAMSDCDPDGPLMCHTTK
MYSTDDGVQFHAFGRVLSGTIHAGQPVKVLGENYTLEDEEDSQICTVGRLWISXWVLIEG
VDQPIVKTATVTEPRGNEEAQIFRPLKFNTTSVIKIAVEPVNPSELPKMLDGLRKVNKSY
PSLTTKVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADPVVTFCETVVETSSLKC
FAETPNKKNKITMIAEPLEKGLAEDIENEVVQITWNRKKLGEFFQTKYDWDLLAARSIWA
FGPDATGPNILVDDTLPSEVDKSLLGSVKDSIVQGFQWGTREGPLCDELIRNVKFKILDA
VIAQEPLHRGGGQIIPTARRVVYSAFLMVRTRLRATEPERPAAPAPAVCSPIGRGHVTQD
APIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFSLSVFHHWQIVPGDPLDKSIVIRP
LEPQPAPHLAREFMIKTRRRKGLSEDVSISKFFDDPMLLELAKQDVVLNYPM
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atggacaccgacctgtacgacgagttcgggaactacatcgggccggagctggactccgac
gacgacgacgacgagctgggcagggaggccaaggacctggacgagctcgaggatgacgac
gatgacgatgacatgggggaccacgacgaggaccaccccggcatggaggtggtgctgcac
gaggacaagaagtactatcccaccgccgaggaggtctacgggcccgaggtggagaccatc
gtgcaggaggaggacacgcagcctctcaccgagcctattattaaacccgtgaaaacaaaa
aaattctctctgatggaacagacgttaccggtcactgtctatgagatggatttcctggca
gatctgatggataactcggagctaattcgcaatgtgactctgtgtgggcacctccatcac
ggcaagacttgttttgttgactgcctgatagaacagacgcacccagaaatccggaaacgc
tatgaccaggatctctgctacactgatatattgttcacagagcaagagaggggtgtaggg
atcaagagcactccagtgactatcgttctgccagacaccaaaggaaaatcttttctcttc
aacatcattgacacgccaggccacgtcaacttttcggatgaggtcacagccggccttcgt
atttcggacggcgtcgtgcttttcattgatgcagctgaaggggtgatgctcaacacggag
cggctcatcaagcacgcggtgcaggagaggctggcggtcaccgtgtgcatcaacaagatc
gaccgcctcatcctggagctcaagctgccccccacggacgcctactacaaactgcgacac
atcgtggacgaagtgaacgggctcatcagcatgtattccaccgatgaaaacctggtcctg
tctccccttctgggaaacgtgtgtttctccagttcacagtacagcatctgcttcacgctg
ggatcttttgcaaagatttatgcagacacatatggtgatatcaattaccaggagtttgca
aagcggctttggggtgacatctacttcaacccgaagactcggaagttcacgaaaaaggcc
ccgaccagcagttcccagcgcagttttgtggagttcatccttgagcccctttacaagatc
ctggctcaggtggttggggatgtggacacgaccctgcccaggactctggatgaacttggc
atccacctgaccaaagaggagctgaaactgaacattcgacccctcctgcggcttgtctgc
aagaagttcttcggggaattcacaggctttgtggacatgtgtgtgcaacacatcccttcc
cccaaagtgggggccaagaccaaaatcgagcacacctacacgggcggcgttgactccgat
ctgggggaggccatgagcgactgcgaccctgatggtccactgatgtgtcacaccacaaag
atgtacagcacagacgacggcgttcagttccacgcctttggcagagtgctcagtggcacc
atccatgctgggcagcctgtgaaggtccttggagaaaactacaccctggaggatgaggag
gattcccagatctgcactgtgggacggctctggatctcgngttgggtgctcatcgaagga
gtggaccagcccatcgtgaagacggcaaccgtgacggagccgcgaggaaacgaggaggct
cagatcttccgtcctctgaagttcaataccacgtctgtcatcaaaatcgctgtggagcca
gtcaatccctctgagctgcccaaaatgttagatggtctccgcaaagtcaacaagagttac
ccatcgcttactactaaggtggaagagtctggggaacacgtgatcttggggacgggggag
ctctatctggactgtgtgatgcatgatctgcgcaagatgtattcagagattgatatcaag
gttgctgatccggttgtgacgttctgcgagacggtggtggaaacgtcctccctgaagtgc
tttgccgagacaccgaataagaagaacaagatcacgatgattgctgagcctctggagaag
ggactcgctgaggacatcgagaatgaagtggtgcagataacatggaacagaaagaagctg
ggtgaattcttccagaccaaatacgattgggatttgctggctgctcgttccatctgggca
ttcgggcctgatgcaaccggcccaaacatcctggtcgatgacacgttgccctccgaggtg
gacaagtcgctgctgggctccgtgaaggacagcattgtacaaggatttcagtggggaacc
agagaagggcccctctgtgatgaattgatccgcaatgtgaagtttaagatcctggatgcc
gtgattgctcaggagcccctgcaccggggcggagggcagatcatcccgacggcccgcagg
gtggtgtactcggccttcctgatggtgaggacgcggctgcgcgcgacggagcccgagcgc
cctgcggcgccggcacccgcggtctgttctcccattggcagaggccacgtgacacaagat
gctccgatcccaggctccccactctacaccatcaaagccttcatcccagccattgactcg
ttcggctttgagacggacctgcggacccacacgcagggccaagccttctcgctctccgtc
ttccaccactggcagattgtgcctggtgaccccttggacaagagcatcgtcatccggccc
ctggagccccagccggccccgcatctggccagggagttcatgatcaagaccaggcgcagg
aagggcctcagcgaggacgtcagcatcagcaagttcttcgacgaccccatgttgctggag
ctggccaagcaggacgttgttctcaactaccccatgtga
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integrated database retrieval system
