Taeniopygia guttata (zebra finch): 100217703
Help
Entry
100217703 CDS
T01082
Name
(RefSeq) collagenase 3
KO
K07994
matrix metalloproteinase-13 (collagenase 3) [EC:3.4.24.-]
Organism
tgu
Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tgu01002
]
100217703
Peptidases and inhibitors [BR:
tgu01002
]
Metallo peptidases
Family M10
100217703
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M10
Hemopexin
PG_binding_1
Reprolysin_3
Reprolysin_5
Reprolysin_4
DUF4953
MerR_2
Motif
Other DBs
NCBI-GeneID:
100217703
NCBI-ProteinID:
XP_030125810
Ensembl:
ENSTGUG00000012726
LinkDB
All DBs
Position
1:complement(39556575..39569329)
Genome browser
AA seq
472 aa
AA seq
DB search
MMQSGLAAVFFFLLGLSFCLTIPIPLEDSHEFTERDLQFAERYLRTHYDLRPNPAGIMKK
SGNTVAAKLREMQAFFGLEVTGKLDEETYELMQKPRCGVPDVGEYNFFPRKLKWSKMNLT
YRIMNYTSDLKRNEVDRAFKKAFKVWSDVTPLNFTRIRSGIADIMISFGTKEHGDFYPFD
GPSGLLAHAFPPGPDYGGDAHFDDDEVWSDDSKGYNLFLVAAHEFGHSLGLEHSRDPGAL
MFPIYTYTGKSGFVLPDDDVQGIQELYGAGDKDPNPKHPKTPEKCDVELSLDAITELRGE
MLVFKDRFFWRLHPQMVEAELVLLKSFWPELPNKIDAAYENPIKDLVFMFKGKKVWALNG
YDIVEDFPKKIYEMGFPKEMRRIDAAVHVKDTGKTLFFTGNKYWSYDEEAEIMDAGYPRL
IEEEFAGIGDKVDAVYERNGYLYFFNGPLQFEYSIWSQRIVRVLHTNSLFWC
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaatcaggacttgctgctgttttctttttcttgttgggtttgtcattttgcctg
acaatccctattccccttgaagacagccatgaattcacagaaagggaccttcagtttgca
gagcgctatctcaggacgcactatgatctccgcccgaatcctgctggcataatgaagaag
agtgggaacacagtcgcagccaaacttcgggaaatgcaagctttttttggcttggaggtg
acaggaaaattagatgaagaaacatatgagctgatgcagaaaccaagatgtggtgtccca
gatgtgggggaatataactttttccctagaaaactcaaatggtcaaaaatgaatttgaca
tacagaattatgaattacacttcagatctgaaacgtaatgaagtagacagagctttcaaa
aaagcatttaaagtttggtctgatgtgactccactgaacttcaccagaatacgaagtggt
atagctgatatcatgatctcctttggcactaaagaacatggtgacttctacccttttgat
ggaccctctggattactggcgcatgcttttcccccgggcccagactatggaggagatgct
cattttgatgatgatgaagtttggtcagatgattctaaaggctataacttgtttcttgtt
gctgcccatgaatttggtcattcactgggacttgaacactctagagaccctggagctttg
atgttcccaatctatacatacactggaaaatctggttttgtgcttcctgatgatgatgtg
caagggatccaagaactctatggtgctggagacaaagatcccaacccaaaacatcccaaa
acaccagagaaatgtgatgtggaattatcacttgatgcaataacagaacttcgtggagaa
atgctggtcttcaaggacaggtttttctggcgactgcaccctcagatggtagaggcagaa
ctagtgttacttaagtccttttggccagagcttccaaataaaatagatgcagcttatgaa
aatcccatcaaagatcttgtgttcatgtttaaaggaaagaaagtctgggctttgaatggt
tacgacatagttgaagacttccctaaaaagatatatgaaatgggattcccaaaagaaatg
agaagaatagatgcagctgtccacgttaaagacactggcaagactctcttttttactgga
aataagtactggagttatgatgaagaggcagaaattatggacgcaggctaccccaggctg
atagaggaagaattcgcaggaattggtgataaagtggatgcagtctatgaaagaaatggt
tacctctacttcttcaatggaccactgcagtttgaatacagcatctggagtcaaagaatt
gtccgtgtcctgcatactaactccttgttttggtgctaa
DBGET
integrated database retrieval system
