Taeniopygia guttata (zebra finch): 100218184
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Entry
100218184 CDS
T01082
Symbol
TRAF3
Name
(RefSeq) TNF receptor-associated factor 3 isoform X1
KO
K03174
TNF receptor-associated factor 3
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu04620
Toll-like receptor signaling pathway
tgu04621
NOD-like receptor signaling pathway
tgu04622
RIG-I-like receptor signaling pathway
tgu05164
Influenza A
tgu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
100218184 (TRAF3)
04621 NOD-like receptor signaling pathway
100218184 (TRAF3)
04622 RIG-I-like receptor signaling pathway
100218184 (TRAF3)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
100218184 (TRAF3)
05168 Herpes simplex virus 1 infection
100218184 (TRAF3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
TRAF3_RING
zf-TRAF
zf-C3HC4
Cast
MPS2
zf-C3HC4_2
ATG16
FliJ
CEP104_ZnF
Sina_ZnF
Spc29
zf-RING_UBOX
Tropomyosin
KxDL
GAS
DUF1664
zf-RING_6
Crescentin
SPATA24
BLOC1_2
Motif
Other DBs
NCBI-GeneID:
100218184
NCBI-ProteinID:
XP_002200611
Ensembl:
ENSTGUG00000012821
LinkDB
All DBs
Position
5:51512184..51581819
Genome browser
AA seq
567 aa
AA seq
DB search
MDTSKKSEPPLSVEMVQQRANPDRSPSASIYVPEQGGYKEKFVNAVEDKYKCEKCHLILC
NPKQTECGHRFCETCMNALLRSSSPKCTACQESIVKDKVFKDNCCRRELLALQIYCRNEN
KGCKEQLSLGQLLMHLRTDCQFEELPCPRADCKEKILRKDLPDHVEKTCKYRETTCKYCK
SQVPMIMLQKHEDTECPCVMVSCPHKCSVKTLMRSELNAHLSECINAPSTCSFKRYGCTF
QGTNQQIKAHEASSAVQHVNLLKEWSNALENKVALLQNESLEKNKSIQTLHNQICSFEIE
IERQKEMLRNNESKILHLQRVIDSQAEKLKELDKEIRPFRQNWEEADSMKSSVESLQNRV
TELESVDKTAGQGARNTSLLETQLSRHDQMLSVHDIRLADMDLRFQVLETASYNGVLIWK
IRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRGE
YDALLPWPFKQKVTLMLMDQGPSRRHLGDAFKPDPNSSSFKKPTGEMNIASGCPVFVAQT
VLENGTYIKDDTIFIKVIVDTSDLPDP
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atggacaccagtaagaagtcagaaccccctttatctgtagaaatggtacagcagagggcc
aatcctgaccgcagtccatcagcatccatctatgttccagagcaaggtggctacaaagag
aaatttgtgaatgccgtggaagataagtacaaatgtgaaaaatgtcacctcatcttatgc
aatcctaaacagactgaatgtggacacaggttctgtgaaacctgcatgaatgccttgctg
aggtcttctagtccaaaatgtacagcatgtcaagaaagcatagtaaaagataaggtattt
aaagataattgttgcaggagagaactacttgcccttcagatatattgcagaaatgaaaac
aagggctgtaaggagcagctatctttgggtcaattactgatgcatttgaggactgactgt
cagtttgaagaactcccatgtcctcgtgctgattgcaaagaaaaaatactacgaaaagat
ttgccagatcatgtagagaagacctgtaaataccgggagacaacctgtaaatactgtaaa
agccaagtcccaatgattatgttgcagaaacatgaagatacagaatgcccatgtgtcatg
gtttcatgtcctcataaatgtagtgttaaaacactcatgaggagcgagttgaatgcacat
ttgtcagaatgtattaatgccccaagtacctgtagttttaagcgttatggctgcactttt
cagggaacaaaccaacaaattaaagcacatgaagccagctcagcagtgcagcatgttaac
ttattgaaagagtggagcaatgctctagaaaataaggtggccttgctccagaatgaaagt
ttggaaaagaacaagagtatacaaactttacataatcagatttgtagctttgaaatagaa
attgaaagacagaaggaaatgctgcggaataatgaatctaaaatacttcatttacagcga
gtgatagacagtcaagcagagaaactcaaagaactggacaaagaaatccgtcccttccga
cagaactgggaggaggctgacagcatgaagagcagcgtggaatccctccagaacagagtg
actgagctggaaagtgttgataaaactgcagggcaaggagctcggaatacaagcctactg
gagacccagctgagcaggcacgatcagatgctgagcgttcacgacatccgcctggctgac
atggacctccgcttccaggtcctagaaactgcaagttacaacggagtgctgatttggaaa
atccgagactataaacgtcggaagcaagaagcagtcatggggaagactctgtccctgtac
agccaacccttttatactggatactttggctacaagatgtgtgccagagtttacctgaac
ggagatggcatgggaaaggggacgcacttgtctctgttttttgtcataatgcgtggagaa
tacgatgctctgcttccttggcccttcaaacagaaagtgactctcatgctcatggatcag
ggaccgtctcgacgccacctgggagatgctttcaagccggatccgaacagcagcagtttc
aagaagccaactggagaaatgaacattgcatctggctgcccagtctttgtggctcaaact
gttctagagaatggaacgtatattaaagatgatactatttttattaaagtcatagtggat
acatcggatctaccagacccctga
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