Taeniopygia guttata (zebra finch): 100221293
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Entry
100221293 CDS
T01082
Symbol
HMGCS1
Name
(RefSeq) hydroxymethylglutaryl-CoA synthase, cytoplasmic isoform X1
KO
K01641
hydroxymethylglutaryl-CoA synthase [EC:
2.3.3.10
]
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu00280
Valine, leucine and isoleucine degradation
tgu00650
Butanoate metabolism
tgu00900
Terpenoid backbone biosynthesis
tgu01100
Metabolic pathways
tgu03320
PPAR signaling pathway
Module
tgu_M00095
C5 isoprenoid biosynthesis, mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
100221293 (HMGCS1)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
100221293 (HMGCS1)
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
100221293 (HMGCS1)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
100221293 (HMGCS1)
Enzymes [BR:
tgu01000
]
2. Transferases
2.3 Acyltransferases
2.3.3 Acyl groups converted into alkyl groups on transfer
2.3.3.10 hydroxymethylglutaryl-CoA synthase
100221293 (HMGCS1)
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GFIT
Motif
Pfam:
HMG_CoA_synt_C
HMG_CoA_synt_N
ACP_syn_III
Lectin_C_term
Cullin
Motif
Other DBs
NCBI-GeneID:
100221293
NCBI-ProteinID:
XP_030113183
Ensembl:
ENSTGUG00000002279
LinkDB
All DBs
Position
Z:complement(49357406..49368559)
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AA seq
531 aa
AA seq
DB search
MGFRSVSATMPGSLPVNAESCWPKDVGIVALEIYFPSQYVDQTELEKYDGVDAGKYTIGL
GQARMGFCSDREDINSLCLTVVQKLMERNNLSYDCIGRLEVGTETIIDKSKSVKTVLMQL
FEESGNTDVEGIDTTNACYGGTAALFNAINWIESSSWDGRYALVVAGDIAVYASGNARPT
GGAGAVAMLVGPNAPLILERGLRGTHMQHAYDFYKPDMVSEYPVVDGKLSIQCYLSALDR
CYTVYRNKIHAQWQKEGTDRRFTLNDFGFMIFHSPYCKLVQKSVARLLLNDFLSDQNPET
ANGVFSGLEAFRDIKLEDTYFDRDVEKAFMKASAELFNQKTKASLLVSNQNGNMYTPSVY
GCLASLLAQYSPEQLAGQRISVFSYGSGFAATLYSIRVTQDATPGSALDKITASLSDLKT
RLDSRKCIAPDVFAENMKLRQETHHLANYIPQCSVEDLFEGTWYLVRVDEKHRRTYARRP
LMSDGPLEARVGVVHPGVVHEHIPSPAKKVPRIPAATESEGVTVAISNGEH
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgggattccgcagcgtatctgccacgatgcctgggtctcttccagtgaatgctgaatcc
tgttggcccaaagatgtgggaattgtggcactggaaatatattttccctctcagtatgtt
gaccagacagagctggagaagtatgatggcgtggatgctgggaagtacaccattgggcta
ggccaggcaaggatggggttctgctctgaccgtgaggatatcaattccctctgcttgacc
gtggttcagaagctcatggagaggaataacctttcctatgattgtattgggagattagaa
gttggaacggagaccataattgacaagtcaaaatctgtgaagactgtcctgatgcagctt
tttgaagagtctggtaatacagacgtagaaggaattgacaccaccaatgcatgctatgga
ggcactgctgctcttttcaatgctattaattggattgagtccagttcctgggatggacgc
tatgccctcgtggtggctggagacatcgctgtgtatgcctctggaaatgccaggcccact
gggggagctggtgctgttgccatgctggtcggcccaaatgcacccctgattctggagaga
gggttgcgtggaacccacatgcagcatgcgtacgacttctataaaccagacatggtctct
gaatatcctgtagtggatggcaagctctccatacagtgctacctcagtgcattggaccgc
tgctacaccgtctatcgcaacaaaatccacgcccagtggcaaaaggaggggacagacaga
cgtttcacgttgaatgactttggattcatgatcttccattctccatactgtaaactggta
cagaaatctgtggctagactcttgctgaatgactttctcagtgaccagaacccagaaaca
gcaaatggtgttttcagtggtcttgaagctttcagggatataaaacttgaagatacatac
tttgacagagatgtggaaaaagcttttatgaaagctagtgcagagctcttcaatcagaaa
accaaagcttcattacttgtatccaatcagaatggaaatatgtataccccttcagtctat
ggttgccttgcctcccttctagcccagtactccccagagcagcttgcgggacagagaatc
agtgtgttctcatatggctctggttttgcggctaccctgtattccatcagggtcacacag
gatgccactcctggttctgcactggacaaaataactgctagcctttctgatctcaaaaca
agacttgactcaagaaaatgtattgcacctgatgtctttgctgaaaacatgaagctcaga
caggaaacacaccatttggccaattatattccacagtgttcagtggaggatctcttcgaa
ggaacatggtaccttgtgcgtgtggatgaaaaacacaggagaacttatgcccggcgccca
ctcatgagtgatggacctctggaagcaagagttggagttgtccacccaggcgttgttcat
gagcacatcccaagccctgctaagaaagtgccaagaatccctgcagcaacagaatctgaa
ggcgttactgtcgccatttccaatggggagcattaa
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