Taeniopygia guttata (zebra finch): 100222155
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Entry
100222155 CDS
T01082
Symbol
PDGFA
Name
(RefSeq) platelet-derived growth factor subunit A isoform X1
KO
K04359
platelet-derived growth factor subunit A
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu04010
MAPK signaling pathway
tgu04020
Calcium signaling pathway
tgu04510
Focal adhesion
tgu04540
Gap junction
tgu04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
100222155 (PDGFA)
04020 Calcium signaling pathway
100222155 (PDGFA)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
100222155 (PDGFA)
04540 Gap junction
100222155 (PDGFA)
09142 Cell motility
04810 Regulation of actin cytoskeleton
100222155 (PDGFA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
tgu04052
]
100222155 (PDGFA)
00536 Glycosaminoglycan binding proteins [BR:
tgu00536
]
100222155 (PDGFA)
Cytokines and neuropeptides [BR:
tgu04052
]
Cytokines
Growth factors (RTK binding)
100222155 (PDGFA)
Glycosaminoglycan binding proteins [BR:
tgu00536
]
Heparan sulfate / Heparin
Growth factors/receptors
100222155 (PDGFA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDGF_N
PDGF
KH_PARP14_8
Phage_Mu_Gp27
Motif
Other DBs
NCBI-GeneID:
100222155
NCBI-ProteinID:
XP_030140359
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All DBs
Position
14:complement(2502439..2538368)
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AA seq
237 aa
AA seq
DB search
MRTWACVLLIGFGYLSFTFSEEAEIPQELIERLAHSEIHSIRDLQRLLEIDSVGYDDVSE
TNLRSYSVHSAKHVQENRPVPIRRKRSIEEAIPAVCKTRTVIYEIPRSQIDPTSANFLIW
PPCVEVKRCTGCCNTSSVKCQPSRIHHRSVKVAKVEYVRKKPKLKEVLVRLEEHMECTCT
SSNTNSDYREEETGETEAWRKACARSYSKAVAEPGRGLRSECSSSALNHTTIFPFQE
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atgaggacctgggcttgcgttttgctgataggttttgggtacctgtcctttaccttctcc
gaggaggccgagatcccgcaggagctcatcgagcggctggcgcacagcgagatccacagc
atccgcgacttgcagcgcctcctggagattgactccgtaggatatgatgatgtttcagaa
acaaacttgagatcttacagtgttcattctgctaaacatgtgcaagagaaccgtcctgtg
cccattcgcagaaaaagaagcattgaggaggccatcccggcggtgtgcaagacgcggacg
gtgatctacgagatacctcggagccagatcgaccccacctcggccaacttcctgatatgg
ccgccctgcgtggaggtgaagcgctgcaccggctgctgcaacaccagcagcgtcaagtgc
cagccctcccggatacaccacaggagcgtcaaggtggcaaaagtggagtatgttagaaaa
aagccaaaattaaaagaagttctggtgagattagaagagcatatggaatgcacctgtaca
tcatcaaatactaattcagattatagagaagaagaaactggcgagaccgaggcatggaga
aaagcctgtgcaaggtcatacagcaaggctgtggcagaaccagggagaggactcagatct
gagtgctcatccagtgccctaaatcacacgaccatcttccctttccaagaatga
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