KEGG   Taeniopygia guttata (zebra finch): 100222172
Entry
100222172         CDS       T01082                                 
Symbol
PTPRF
Name
(RefSeq) receptor-type tyrosine-protein phosphatase F isoform X1
  KO
K05695  receptor-type tyrosine-protein phosphatase F [EC:3.1.3.48]
Organism
tgu  Taeniopygia guttata (zebra finch)
Pathway
tgu04514  Cell adhesion molecules
tgu04520  Adherens junction
tgu04910  Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:tgu00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    100222172 (PTPRF)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04520 Adherens junction
    100222172 (PTPRF)
 09150 Organismal Systems
  09152 Endocrine system
   04910 Insulin signaling pathway
    100222172 (PTPRF)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:tgu01009]
    100222172 (PTPRF)
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:tgu04515]
    100222172 (PTPRF)
Enzymes [BR:tgu01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.3  Phosphoric-monoester hydrolases
    3.1.3.48  protein-tyrosine-phosphatase
     100222172 (PTPRF)
Protein phosphatases and associated proteins [BR:tgu01009]
 Protein tyrosine phosphatases (PTPs)
  Class I PTPs (Classical)
   Receptor PTPs
    100222172 (PTPRF)
Cell adhesion molecules [BR:tgu04515]
 Immunoglobulin superfamily
  Type II RPTP family
   100222172 (PTPRF)
SSDB
Motif
Pfam: Y_phosphatase fn3 I-set Ig_3 Ig_DSCAM-DSCAML_C Pur_ac_phosph_N Ig_2 ig fn3_2 Interfer-bind PTP-SAK Tc-R-P DSPc Y_phosphatase3 V-set C2-set_2 PTPlike_phytase PTP-NADK Ig_C17orf99 Fn3_PTPRU Insulin_TMD DUF3377 ICAM_N TMEM154
Other DBs
NCBI-GeneID: 100222172
NCBI-ProteinID: XP_030134782
Ensembl: ENSTGUG00000007224
LinkDB
Position
8:complement(10511894..10887764)
AA seq 1922 aa
MVPNFCIPVLTVPAAILCCLMLPLAGADSKPTFMKAPEDQIGISGGVASFVCQATGEPKP
RITWMKKGKKVSSQRFEVIEFDDGSGSVLRIQPLRVHRDEAIYECTATNSVGEINTSAKL
TVLEEDHLPAGFPTIDMGPQLKVVEKARTATMLCAASGNPDPEISWFKDFLPVDTATSNG
RIKQLRSGGTPIRGALQIENSEESDQGKYECVATNSAGTRYSAPANLYVRVRRVAPRFSI
PPSNHEVMPGGSVNLTCVAVGAPMPYVKWMAGVEELTKEDEMPVGRNVLELNNIMQSANY
TCVAISSLGMIEATAQITVKALPKPPTEPLVTETTATSVTLTWDSGNSDPISYYVIQYKP
KSLEGQFQEVDGVATTRYSIGGLSPFSEYEFRIIAVNNIGRGPPSELVEARTGEQAPSSP
PLKVQARMLSASTMLVQWEQPEEPNGQIRGYRVYYTTDPHLPLSMWQKHNTDDSHLTTVG
SLITGTTYSIRVLAFTSVGDGPPSDIIQVKTQQGVPAQPADFQAEAESDTRILLTWLPAS
QERITKYELLYWEGEDVTQQKVEFDPTSSYAVEGLKPDTLYKFRLGARSELGVGVYTPMV
EARTAQSTPSAPPQEVECVSTSSTTIRVSWVPPPAQSRNGVITQYSIAYQAVEGDDNTKH
VVDGIGREHSSWEIKDLEKWTEYKVWVRAHTDVGPGPESIPVHVRTDEDVPSAPPRKVEV
ESVNSTAIRVSWKLPISNKQHGQIRGYQVTYVKLENNEPRGQPVIKDVMLSEAQWRAEDT
VDHETVIGGLLPETTYSVTVAAYTTKGDGARSKPKVITTTGAVPGKPTMMISTTAMNTAL
IQWHPPKEMVGELLGYRLQYRRLDEEKMNTIDFGKRDHHYTVTNLHKGATYLFKLSAKNR
AGPGEEFEKEITTAEDVPSGFPQNLRVVGLTTSTTEVAWEPPVLAERNGKIVNYTVVYRD
INSQQDLANITKDTSITLTNLKPDTTYDIKVRARTNKGAGPLSPSIQSRTMPVEQVFAKN
FRVNAVMKTSVLLSWEVPDSYKSAVPFKILYNSQSVEVDGHSMKKLISDLQPDTDYSFVL
MNRGSSAGGLQHLVSIRTAPDVLQSKPIATNKYIQEGKFTLTLPKVQTTVPVRWYYIVVV
PADQSTSTLTARWRTPDEMELDQLLEAISQGSQSRRQRRQADRLKPYIAAQVDVLPETFT
LGDEKNYKGFYNKPLSQDLSYRCFVLASLEDGDTKRYAASPYSDEIVMEVASAKQQDEPE
MLWVMGPVLAVILIIIIVIAILLFKSKQERKRAHSPSSKDEHSIGLKDSLLAHSSDPVEM
RRLNYQTPGASVPCCPNISSMRDHPPIPVTDLADNIDRLKANDGLKFSQEYESIDPGQQF
TWENSNLEVNKPKNRYANVIAYDHSRVILTSIDGVPGSDYINANYIDGYRKQNAYIATQG
PLPETLSDFWRMVWEQRTATIVMMTRLEEKSRVKCDQYWPSRGSETYGMIQVVLLDTVEL
ATYTVRTFALYKNGSNEKTELRQFQFMAWPDHGVPEYPTPILAFLRRVKACNPTDAGPMV
VHCSAGVGRTGCFIVIDAMLERMKHEKTVDIYGHVTCMRSQRNYMVQTEDQYIFIHEALL
EAATCGNTEVPARNLFAHIQKLTQVPPGESVTEMELEFKMLANSKAHTSRFISANLPCNK
FKNRLVNIMPYELTRVCLQPIRGVEGSDYINASFIDGYRQQKAYIATQGPLAETTEDFWR
MLWEHDSTIVVMLTKLREMGREKCHQYWPAERSARYQYFVVDPMAEYNMPQYILREFKVT
DARDGQSRTIRQFQFTDWPEQGVPKTGEGFIDFIGQVHKTKEQFGQDGPITVHCSAGVGR
TGVFITLSIVLERMRYEGVVDMFQMVKTLRTQRPAMVQTEDQYQLCYRAALEYLGSFDHY
AT
NT seq 5769 nt   +upstreamnt  +downstreamnt
atggtgcctaacttctgcatcccagtactcactgtgccagcagccatcctctgctgcttg
atgctgcctttagcaggagcagacagcaagccaacatttatgaaggctcctgaagatcag
attgggatttctggaggagtggcctctttcgtgtgtcaggcaacaggagagcccaaacct
cgtatcacgtggatgaagaaggggaagaaagtcagttctcagcggtttgaggttatcgag
ttcgatgatggatcaggatcagttctgcggatacagcccctgcgtgtccatcgagatgag
gctatctatgagtgcacagccaccaatagtgtgggggagataaacaccagtgccaagtta
acagtgttagaagaagaccatctcccagctggcttcccaaccattgacatgggcccgcag
ctgaaggtggtggaaaaggcccgcacagccacgatgctctgtgctgccagtggtaaccct
gatcccgaaatctcctggttcaaggacttcctgcccgtggacactgccaccagcaatggg
cgaatcaagcaactccgctcgggtggtacaccgatcagaggagctctgcaaatagagaac
agtgaggagtcagaccaaggcaaatatgaatgtgttgcaaccaacagcgcaggaacccgc
tactctgccccagccaacctttatgttcgagtgcggcgtgttgctcctcgattctcgatc
cctccgagcaaccatgaggtgatgcctggggggagcgtgaacctcacgtgcgtggcagta
ggtgctccaatgccctatgtgaagtggatggctggtgtggaggaactgaccaaagaagat
gagatgcccgtcggtaggaatgtcctggagctgaataacatcatgcagtctgccaactac
acctgcgtggccatctcttcccttggcatgatcgaagccacagcccagatcactgtcaaa
gcactgccaaaacctccaacagagccattagtgactgaaacaacagctaccagcgtgacc
ctcacctgggattcaggcaactctgaccccatttcatattacgtcatccagtacaagccc
aaatccctggagggccagttccaggaggtggatggtgtggcaacaacccgctatagcata
ggtgggctcagccccttctcagagtacgagttccggatcatcgcagtcaacaacattggc
aggggtccccccagtgagctggtggaggccaggacaggagagcaagctccttcaagtcct
cccctcaaagtccaggcacggatgctgagtgccagcaccatgctggtccagtgggagcag
ccggaggagcccaatggacagatccgagggtaccgcgtgtactacaccaccgacccgcac
ctgcctttgagcatgtggcagaaacacaacacagacgacagccacctcaccaccgtgggc
agcctcatcacaggcaccacctacagcatccgcgtcctggccttcacttcggtgggcgac
gggcccccgtcggacatcatccaggtcaaaacacagcaaggggttcctgcccagccagct
gacttccaggcagaagcagagtctgatacccgcatcctgttgacatggctgcctgcctct
caggaacgcattactaaatatgagctgctgtactgggaaggagaggatgtcactcagcaa
aaggtggagtttgacccaacctcctcatatgccgtggaaggtctcaaaccagacacactg
tataagttccgtctgggtgcccgatcagagctgggggtaggagtttacacccccatggtg
gaagccagaactgcccaatccaccccctccgccccaccccaagaagtcgagtgtgtaagc
accagctccaccaccatccgggtaagttgggtgccaccgcccgcccagagccgcaatggg
gtcatcacccagtactccattgcctaccaggcagtggaaggagatgacaacaccaagcat
gtggtggatggcattggacgggagcattccagctgggagatcaaggacctggagaaatgg
acagaatacaaggtgtgggtaagggctcacaccgatgtggggccaggaccggagagcatc
cccgtgcacgtgcgcactgacgaggatgtgcccagtgccccaccgcgaaaggtggaggtg
gagtctgtgaattcgactgccatccgagtgagctggaagctgcccatctccaacaagcag
catgggcagatccgcgggtatcaggttacctacgtaaagctggaaaacaacgagccccga
gggcagccagtgatcaaggacgtcatgctgtcagaagcacagtggagagctgaggacacc
gtcgaccatgagacagtcattggaggcctgctgccagaaaccacctactccgtcacagtt
gctgcctacaccaccaaaggagatggtgcccgcagcaagcccaaagtcatcaccaccaca
ggggcagtcccggggaagcccaccatgatgattagcacgacagccatgaacacagccctc
atccagtggcacccacccaaggagatggtaggggagctgctgggttaccggctgcagtac
agacgtctggatgaggaaaaaatgaacacgatagacttcgggaagagagaccatcactac
acagtgaccaacctgcacaagggggccacatacctcttcaagttgtctgccaagaacaga
gccggcccaggagaggagtttgagaaggagatcacaactgccgaagatgtgccaagtggt
ttcccacagaacctgcgtgtggtgggtctcaccacttccaccacagaagttgcttgggag
cccccggttttggcagaaaggaatggcaagatcgtcaactacacagtggtatacagggac
ataaatagccagcaggatctggctaacatcaccaaggacacaagtatcactttgacaaat
ttgaaacctgataccacttacgacatcaaagtgagggcccgcaccaataagggggctggg
ccactcagccccagcatccagtcccggaccatgcctgtagagcaagtgtttgctaagaac
ttccgtgtcaatgccgtcatgaaaacatctgtgttgctgagctgggaagtgcctgactcc
tataaatctgcagtgccttttaagattctgtacaatagccagagtgtggaggtggacggc
cactcaatgaagaagctcataagtgacctccagccagacacggactattcttttgtgctg
atgaaccgtgggagcagtgcaggggggctccagcacctcgtctcaatccgcactgctcct
gatgtcttgcaaagcaaacccatcgccacaaacaagtacatacaggaaggaaaattcaca
ctaactcttcccaaagtgcagaccactgtgccagttcggtggtactacatcgtggttgtg
ccagcagaccagagcaccagcaccctgactgctcggtggcggacgcctgatgagatggag
ctggaccagctgctggaggccataagccaggggagtcagagcaggaggcagcgacgccag
gcagacagactcaagccctacattgctgctcaagtggatgtgctgcctgagaccttcacc
ctgggggatgagaagaactacaaaggtttctacaacaagcctctgtctcaagatctgagc
tatcgctgcttcgtgctggcctcgctggaggatggggacacgaagagatatgcagccagc
ccctactcggatgagatcgtgatggaagtggcatcagcaaagcagcaggatgaaccagag
atgctgtgggtgatgggacctgtcctggctgtgatattaatcatcatcattgtcattgcc
atacttctcttcaaaagtaagcaagaaaggaaaagggcacattccccctcttccaaggat
gagcactccatcggcctgaaggactcactcttggcccactcatctgacccagtggagatg
aggcggctcaactaccagactccaggtgccagtgtcccctgttgcccgaatatctcaagc
atgcgtgaccacccccccatccccgtgaccgacctcgctgacaacatcgaccggctcaag
gccaacgatgggctgaagttctcccaggagtacgagtccattgatccggggcagcagttc
acctgggagaactccaacctggaagtgaataaacctaaaaaccgctatgcaaatgtgata
gcctatgaccactcacgagtcatcctgacttccatcgatggggtcccaggcagtgattac
atcaatgccaattacatcgatgggtatcggaagcagaacgcctacatcgccacgcaggga
ccgctgccagaaaccctcagcgacttctggaggatggtgtgggaacagagaacagcaact
atagtcatgatgaccaggctagaggagaagtccagggtaaagtgtgaccagtactggccg
agccggggtagtgaaacctatgggatgatccaggtggtcctgctggacacagtggagctg
gcgacctacaccgtccgcacctttgcgctgtacaagaatggctccaatgagaagacagag
ctgagacagttccagttcatggcttggcctgatcacggggtcccagaataccccacccca
atcctcgctttcctgcgacgggtcaaggcctgtaacccaacagatgctgggcccatggtt
gtgcattgcagtgctggcgtgggccgaaccggctgcttcattgtcatcgacgccatgctg
gagcggatgaagcacgagaagaccgtggacatctacggccacgtgacgtgcatgcgctcc
cagcgcaactacatggtgcagacagaggaccagtacatcttcatccacgaggccttgctg
gaggctgccacgtgcggcaacaccgaggtgcccgcgcgcaacctcttcgcccacatccag
aagctgacccaggtgccaccgggcgagagcgttactgaaatggagctggaattcaagatg
ctggccaattctaaagcacatacctcacgtttcatcagtgccaacctcccatgcaacaaa
ttcaagaaccgcctcgtgaacatcatgccctatgagctgacaagagtctgcctgcagccc
atccggggtgtcgagggctctgactacatcaatgccagcttcatagatggctacaggcag
cagaaggcctacatcgccacgcagggaccactggccgagaccacagaggatttctggcgg
atgctctgggagcacgactccaccattgtggtgatgttgacaaagctgcgtgagatgggc
cgggagaagtgccatcagtactggcctgcagagcgctctgcccggtaccagtactttgtg
gtggaccccatggcagagtacaacatgccacagtacatcctccgggagttcaaggtgacg
gatgccagggacggccagtcacggaccatccgccagttccagttcacagactggcctgag
cagggagtgccaaagacaggagagggtttcattgacttcattgggcaggtgcacaagacc
aaggagcagttcgggcaggatgggcccatcacagtgcactgcagtgctggggttgggcgc
accggcgtgttcatcacactcagcattgtgctggagaggatgcgctacgagggcgtggtg
gacatgttccagatggtgaagaccttgcggacacagcgaccagccatggtgcagacagag
gaccagtaccagctgtgctacagagccgcactggagtaccttggcagcttcgaccactat
gcaacgtaa

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