Entry |
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Symbol |
PTPRF
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Name |
(RefSeq) receptor-type tyrosine-protein phosphatase F isoform X1
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KO |
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Organism |
tgu Taeniopygia guttata (zebra finch)
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Pathway |
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Brite |
KEGG Orthology (KO) [BR:tgu00001]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
100222172 (PTPRF)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
100222172 (PTPRF)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
100222172 (PTPRF)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:tgu01009]
100222172 (PTPRF)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:tgu04515]
100222172 (PTPRF)
Enzymes [BR:tgu01000]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
100222172 (PTPRF)
Protein phosphatases and associated proteins [BR:tgu01009]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
100222172 (PTPRF)
Cell adhesion molecules [BR:tgu04515]
Immunoglobulin superfamily
Type II RPTP family
100222172 (PTPRF)
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
8:complement(10511894..10887764)
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AA seq |
1922 aa
MVPNFCIPVLTVPAAILCCLMLPLAGADSKPTFMKAPEDQIGISGGVASFVCQATGEPKP
RITWMKKGKKVSSQRFEVIEFDDGSGSVLRIQPLRVHRDEAIYECTATNSVGEINTSAKL
TVLEEDHLPAGFPTIDMGPQLKVVEKARTATMLCAASGNPDPEISWFKDFLPVDTATSNG
RIKQLRSGGTPIRGALQIENSEESDQGKYECVATNSAGTRYSAPANLYVRVRRVAPRFSI
PPSNHEVMPGGSVNLTCVAVGAPMPYVKWMAGVEELTKEDEMPVGRNVLELNNIMQSANY
TCVAISSLGMIEATAQITVKALPKPPTEPLVTETTATSVTLTWDSGNSDPISYYVIQYKP
KSLEGQFQEVDGVATTRYSIGGLSPFSEYEFRIIAVNNIGRGPPSELVEARTGEQAPSSP
PLKVQARMLSASTMLVQWEQPEEPNGQIRGYRVYYTTDPHLPLSMWQKHNTDDSHLTTVG
SLITGTTYSIRVLAFTSVGDGPPSDIIQVKTQQGVPAQPADFQAEAESDTRILLTWLPAS
QERITKYELLYWEGEDVTQQKVEFDPTSSYAVEGLKPDTLYKFRLGARSELGVGVYTPMV
EARTAQSTPSAPPQEVECVSTSSTTIRVSWVPPPAQSRNGVITQYSIAYQAVEGDDNTKH
VVDGIGREHSSWEIKDLEKWTEYKVWVRAHTDVGPGPESIPVHVRTDEDVPSAPPRKVEV
ESVNSTAIRVSWKLPISNKQHGQIRGYQVTYVKLENNEPRGQPVIKDVMLSEAQWRAEDT
VDHETVIGGLLPETTYSVTVAAYTTKGDGARSKPKVITTTGAVPGKPTMMISTTAMNTAL
IQWHPPKEMVGELLGYRLQYRRLDEEKMNTIDFGKRDHHYTVTNLHKGATYLFKLSAKNR
AGPGEEFEKEITTAEDVPSGFPQNLRVVGLTTSTTEVAWEPPVLAERNGKIVNYTVVYRD
INSQQDLANITKDTSITLTNLKPDTTYDIKVRARTNKGAGPLSPSIQSRTMPVEQVFAKN
FRVNAVMKTSVLLSWEVPDSYKSAVPFKILYNSQSVEVDGHSMKKLISDLQPDTDYSFVL
MNRGSSAGGLQHLVSIRTAPDVLQSKPIATNKYIQEGKFTLTLPKVQTTVPVRWYYIVVV
PADQSTSTLTARWRTPDEMELDQLLEAISQGSQSRRQRRQADRLKPYIAAQVDVLPETFT
LGDEKNYKGFYNKPLSQDLSYRCFVLASLEDGDTKRYAASPYSDEIVMEVASAKQQDEPE
MLWVMGPVLAVILIIIIVIAILLFKSKQERKRAHSPSSKDEHSIGLKDSLLAHSSDPVEM
RRLNYQTPGASVPCCPNISSMRDHPPIPVTDLADNIDRLKANDGLKFSQEYESIDPGQQF
TWENSNLEVNKPKNRYANVIAYDHSRVILTSIDGVPGSDYINANYIDGYRKQNAYIATQG
PLPETLSDFWRMVWEQRTATIVMMTRLEEKSRVKCDQYWPSRGSETYGMIQVVLLDTVEL
ATYTVRTFALYKNGSNEKTELRQFQFMAWPDHGVPEYPTPILAFLRRVKACNPTDAGPMV
VHCSAGVGRTGCFIVIDAMLERMKHEKTVDIYGHVTCMRSQRNYMVQTEDQYIFIHEALL
EAATCGNTEVPARNLFAHIQKLTQVPPGESVTEMELEFKMLANSKAHTSRFISANLPCNK
FKNRLVNIMPYELTRVCLQPIRGVEGSDYINASFIDGYRQQKAYIATQGPLAETTEDFWR
MLWEHDSTIVVMLTKLREMGREKCHQYWPAERSARYQYFVVDPMAEYNMPQYILREFKVT
DARDGQSRTIRQFQFTDWPEQGVPKTGEGFIDFIGQVHKTKEQFGQDGPITVHCSAGVGR
TGVFITLSIVLERMRYEGVVDMFQMVKTLRTQRPAMVQTEDQYQLCYRAALEYLGSFDHY
AT |
NT seq |
5769 nt +upstreamnt +downstreamnt
atggtgcctaacttctgcatcccagtactcactgtgccagcagccatcctctgctgcttg
atgctgcctttagcaggagcagacagcaagccaacatttatgaaggctcctgaagatcag
attgggatttctggaggagtggcctctttcgtgtgtcaggcaacaggagagcccaaacct
cgtatcacgtggatgaagaaggggaagaaagtcagttctcagcggtttgaggttatcgag
ttcgatgatggatcaggatcagttctgcggatacagcccctgcgtgtccatcgagatgag
gctatctatgagtgcacagccaccaatagtgtgggggagataaacaccagtgccaagtta
acagtgttagaagaagaccatctcccagctggcttcccaaccattgacatgggcccgcag
ctgaaggtggtggaaaaggcccgcacagccacgatgctctgtgctgccagtggtaaccct
gatcccgaaatctcctggttcaaggacttcctgcccgtggacactgccaccagcaatggg
cgaatcaagcaactccgctcgggtggtacaccgatcagaggagctctgcaaatagagaac
agtgaggagtcagaccaaggcaaatatgaatgtgttgcaaccaacagcgcaggaacccgc
tactctgccccagccaacctttatgttcgagtgcggcgtgttgctcctcgattctcgatc
cctccgagcaaccatgaggtgatgcctggggggagcgtgaacctcacgtgcgtggcagta
ggtgctccaatgccctatgtgaagtggatggctggtgtggaggaactgaccaaagaagat
gagatgcccgtcggtaggaatgtcctggagctgaataacatcatgcagtctgccaactac
acctgcgtggccatctcttcccttggcatgatcgaagccacagcccagatcactgtcaaa
gcactgccaaaacctccaacagagccattagtgactgaaacaacagctaccagcgtgacc
ctcacctgggattcaggcaactctgaccccatttcatattacgtcatccagtacaagccc
aaatccctggagggccagttccaggaggtggatggtgtggcaacaacccgctatagcata
ggtgggctcagccccttctcagagtacgagttccggatcatcgcagtcaacaacattggc
aggggtccccccagtgagctggtggaggccaggacaggagagcaagctccttcaagtcct
cccctcaaagtccaggcacggatgctgagtgccagcaccatgctggtccagtgggagcag
ccggaggagcccaatggacagatccgagggtaccgcgtgtactacaccaccgacccgcac
ctgcctttgagcatgtggcagaaacacaacacagacgacagccacctcaccaccgtgggc
agcctcatcacaggcaccacctacagcatccgcgtcctggccttcacttcggtgggcgac
gggcccccgtcggacatcatccaggtcaaaacacagcaaggggttcctgcccagccagct
gacttccaggcagaagcagagtctgatacccgcatcctgttgacatggctgcctgcctct
caggaacgcattactaaatatgagctgctgtactgggaaggagaggatgtcactcagcaa
aaggtggagtttgacccaacctcctcatatgccgtggaaggtctcaaaccagacacactg
tataagttccgtctgggtgcccgatcagagctgggggtaggagtttacacccccatggtg
gaagccagaactgcccaatccaccccctccgccccaccccaagaagtcgagtgtgtaagc
accagctccaccaccatccgggtaagttgggtgccaccgcccgcccagagccgcaatggg
gtcatcacccagtactccattgcctaccaggcagtggaaggagatgacaacaccaagcat
gtggtggatggcattggacgggagcattccagctgggagatcaaggacctggagaaatgg
acagaatacaaggtgtgggtaagggctcacaccgatgtggggccaggaccggagagcatc
cccgtgcacgtgcgcactgacgaggatgtgcccagtgccccaccgcgaaaggtggaggtg
gagtctgtgaattcgactgccatccgagtgagctggaagctgcccatctccaacaagcag
catgggcagatccgcgggtatcaggttacctacgtaaagctggaaaacaacgagccccga
gggcagccagtgatcaaggacgtcatgctgtcagaagcacagtggagagctgaggacacc
gtcgaccatgagacagtcattggaggcctgctgccagaaaccacctactccgtcacagtt
gctgcctacaccaccaaaggagatggtgcccgcagcaagcccaaagtcatcaccaccaca
ggggcagtcccggggaagcccaccatgatgattagcacgacagccatgaacacagccctc
atccagtggcacccacccaaggagatggtaggggagctgctgggttaccggctgcagtac
agacgtctggatgaggaaaaaatgaacacgatagacttcgggaagagagaccatcactac
acagtgaccaacctgcacaagggggccacatacctcttcaagttgtctgccaagaacaga
gccggcccaggagaggagtttgagaaggagatcacaactgccgaagatgtgccaagtggt
ttcccacagaacctgcgtgtggtgggtctcaccacttccaccacagaagttgcttgggag
cccccggttttggcagaaaggaatggcaagatcgtcaactacacagtggtatacagggac
ataaatagccagcaggatctggctaacatcaccaaggacacaagtatcactttgacaaat
ttgaaacctgataccacttacgacatcaaagtgagggcccgcaccaataagggggctggg
ccactcagccccagcatccagtcccggaccatgcctgtagagcaagtgtttgctaagaac
ttccgtgtcaatgccgtcatgaaaacatctgtgttgctgagctgggaagtgcctgactcc
tataaatctgcagtgccttttaagattctgtacaatagccagagtgtggaggtggacggc
cactcaatgaagaagctcataagtgacctccagccagacacggactattcttttgtgctg
atgaaccgtgggagcagtgcaggggggctccagcacctcgtctcaatccgcactgctcct
gatgtcttgcaaagcaaacccatcgccacaaacaagtacatacaggaaggaaaattcaca
ctaactcttcccaaagtgcagaccactgtgccagttcggtggtactacatcgtggttgtg
ccagcagaccagagcaccagcaccctgactgctcggtggcggacgcctgatgagatggag
ctggaccagctgctggaggccataagccaggggagtcagagcaggaggcagcgacgccag
gcagacagactcaagccctacattgctgctcaagtggatgtgctgcctgagaccttcacc
ctgggggatgagaagaactacaaaggtttctacaacaagcctctgtctcaagatctgagc
tatcgctgcttcgtgctggcctcgctggaggatggggacacgaagagatatgcagccagc
ccctactcggatgagatcgtgatggaagtggcatcagcaaagcagcaggatgaaccagag
atgctgtgggtgatgggacctgtcctggctgtgatattaatcatcatcattgtcattgcc
atacttctcttcaaaagtaagcaagaaaggaaaagggcacattccccctcttccaaggat
gagcactccatcggcctgaaggactcactcttggcccactcatctgacccagtggagatg
aggcggctcaactaccagactccaggtgccagtgtcccctgttgcccgaatatctcaagc
atgcgtgaccacccccccatccccgtgaccgacctcgctgacaacatcgaccggctcaag
gccaacgatgggctgaagttctcccaggagtacgagtccattgatccggggcagcagttc
acctgggagaactccaacctggaagtgaataaacctaaaaaccgctatgcaaatgtgata
gcctatgaccactcacgagtcatcctgacttccatcgatggggtcccaggcagtgattac
atcaatgccaattacatcgatgggtatcggaagcagaacgcctacatcgccacgcaggga
ccgctgccagaaaccctcagcgacttctggaggatggtgtgggaacagagaacagcaact
atagtcatgatgaccaggctagaggagaagtccagggtaaagtgtgaccagtactggccg
agccggggtagtgaaacctatgggatgatccaggtggtcctgctggacacagtggagctg
gcgacctacaccgtccgcacctttgcgctgtacaagaatggctccaatgagaagacagag
ctgagacagttccagttcatggcttggcctgatcacggggtcccagaataccccacccca
atcctcgctttcctgcgacgggtcaaggcctgtaacccaacagatgctgggcccatggtt
gtgcattgcagtgctggcgtgggccgaaccggctgcttcattgtcatcgacgccatgctg
gagcggatgaagcacgagaagaccgtggacatctacggccacgtgacgtgcatgcgctcc
cagcgcaactacatggtgcagacagaggaccagtacatcttcatccacgaggccttgctg
gaggctgccacgtgcggcaacaccgaggtgcccgcgcgcaacctcttcgcccacatccag
aagctgacccaggtgccaccgggcgagagcgttactgaaatggagctggaattcaagatg
ctggccaattctaaagcacatacctcacgtttcatcagtgccaacctcccatgcaacaaa
ttcaagaaccgcctcgtgaacatcatgccctatgagctgacaagagtctgcctgcagccc
atccggggtgtcgagggctctgactacatcaatgccagcttcatagatggctacaggcag
cagaaggcctacatcgccacgcagggaccactggccgagaccacagaggatttctggcgg
atgctctgggagcacgactccaccattgtggtgatgttgacaaagctgcgtgagatgggc
cgggagaagtgccatcagtactggcctgcagagcgctctgcccggtaccagtactttgtg
gtggaccccatggcagagtacaacatgccacagtacatcctccgggagttcaaggtgacg
gatgccagggacggccagtcacggaccatccgccagttccagttcacagactggcctgag
cagggagtgccaaagacaggagagggtttcattgacttcattgggcaggtgcacaagacc
aaggagcagttcgggcaggatgggcccatcacagtgcactgcagtgctggggttgggcgc
accggcgtgttcatcacactcagcattgtgctggagaggatgcgctacgagggcgtggtg
gacatgttccagatggtgaagaccttgcggacacagcgaccagccatggtgcagacagag
gaccagtaccagctgtgctacagagccgcactggagtaccttggcagcttcgaccactat
gcaacgtaa |