KEGG   Taeniopygia guttata (zebra finch): 100222477
Entry
100222477         CDS       T01082                                 
Symbol
APAF1
Name
(RefSeq) apoptotic protease-activating factor 1 isoform X1
  KO
K02084  apoptotic protease-activating factor
Organism
tgu  Taeniopygia guttata (zebra finch)
Pathway
tgu04115  p53 signaling pathway
tgu04210  Apoptosis
tgu05164  Influenza A
tgu05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:tgu00001]
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    100222477 (APAF1)
   04115 p53 signaling pathway
    100222477 (APAF1)
 09160 Human Diseases
  09172 Infectious disease: viral
   05164 Influenza A
    100222477 (APAF1)
   05168 Herpes simplex virus 1 infection
    100222477 (APAF1)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz NB-ARC APAF1_C EIF3I Beta-prop_TEP1_2nd WDR55 Beta-prop_CAF1B_HIR1 APAF-1-like_WHD Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_EML WDR90_beta-prop_4th WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st Beta-prop_IFT122_1st Beta-prop_EIPR1 NBCH_WD40 Beta-prop_RIG_2nd CARD Beta-prop_TEP1_C Beta-prop_WDR19_1st Beta-prop_Vps41 eIF2A Beta-prop_WDR35_TULP_N Beta-prop_HPS5 PEP5_VPS11_N Beta-prop_IFT140_1st Beta-prop_SCAP Beta-prop_NWD2_C WD40_RFWD3 CARD_2 WD40_like Beta-prop_NUP159_NUP214 Ge1_WD40 Beta-prop_DCAF4 Beta-prop_WDR11_2nd Beta-prop_DCAF12 WDR54 DUF2415 AAA_16 Dark_WHD RAB3GAP2_N AAA_22
Other DBs
NCBI-GeneID: 100222477
NCBI-ProteinID: XP_002190128
Ensembl: ENSTGUG00000008761
UniProt: H0ZER9
LinkDB
Position
1A:44482873..44513875
AA seq 1249 aa
MDVKSRNYLLMNRQALENDIKTSYIMDRMISDEVLTLQEEERVKQQNTQKERAAMLINII
LTKDNNSYRSFYNALLHEGYRDLAALLQDGIPAVSSGNRKSSMDGMTSYVKTILCEGGVP
QRPVVFVTRPKLVDAIKKKLYCLGSDPGWVTVYGMAGCGKTVLTAEALRDPQLLEDYFPG
GVHWISVGKQDKAGLLIKLQNLCSRLEHDSTLSQRPPLNIEEAKDRLRLLMLRKYPRSLL
VLDDIWDSWVLKAFDNQCQVLITSRDRSVTDAVAGNKYEVHVESGLAHEKGLEILSLFVN
MKISELPEQANSLVRECKGSPLVISLIGALLRDFPSRWEYYLRQLQNKQFKRIRKSSSYD
YEALDEAMSISVEQLDDNYKDYYKDLSILPKDVKVPTKVLCILWDMETEEVEDILQEFVN
KSLLFCDRNGKSFHYYLHDLQLDFLTEKNRNQLQELHKNIVNQYKKYYKLNTPVLSQEDC
MYWYNFLAYHMAGAKMQQELRDLMFSLDWIKAKTELVGPAHLIHEYVEYSSVLDQKDSTV
RENFQEFLSLNGHLLGRQPFPDIIQLGLCQPETSEVYQQAKLHAQRETGTFYLEWINKKS
LKNLYRLVVRPHRDAVYHACFSKDKQRIASCGADKTLQVFKAESGERLLEINAHDDEILC
CTFSADGEFVATCSSDKKVKVWNSRTGQCRCVYEEHSEQVNCCQFNNKSGQYLLATCSND
TFIKIWDLNKKYCRNTMIGHENSVNHCRFSPNDEYVASCSTDGTVKLWESRSGNELKSIE
IKDFFKNADEKPDDVEVLVKCCSWSRNGDKILVVAKNKLLLFDINTCGLLTQVIVSHHST
IQYCDFCPGDELVAVALSHCSVELWNIKSLSKVAYCRGHMSWVHCVTFSPDGSLFLTSSD
DQTIRIWETKKVCKSSDAVLKSELDVVFHNGEVMILAIYNQKNLQLINGNTDNVIMQTVA
QESPISCCCLSEDLKFAAFGQESGTIKVLQLSDGKVLKSWEAYRTSVQHCRFTPDCQTLI
SSAHDPVIQVWNWQLSECVFLRGHNEAIKDFRLLENSKILSWSFDGTVKVWNITTGNPER
DFACHRGAVLSCAVSPDGSKFSSASADKTAKIWSFESSSVLHELKDHEACVRCCTFSPNN
KLLATGDDKGEIRIWDVLTGTLLHFCSPVTVDEGEPTHGGWVTDLSFSPDSKMLVSSGGY
LKWWNVTTGESLQTFYTNGTNLKSIHVSPNFKVYVTVDNLGILYVLQKF
NT seq 3750 nt   +upstreamnt  +downstreamnt
atggatgtcaagagtagaaactatttgcttatgaatcgtcaagcactggaaaatgacatc
aagacttcttatattatggatcgtatgatttctgatgaagtattgacattacaggaggag
gagagagtgaagcaacagaatacacagaaggagcgagcagctatgctaataaacattatt
cttacaaaagataataattcatatagatcattttataatgcactgctccatgaagggtac
agagatcttgctgcgcttcttcaggatggcatccctgccgtctcgtctggtaacagaaag
agctcaatggatggaatgacttcctacgtgaagaccattctctgcgaaggaggcgtacca
cagagaccagttgtgtttgtcactcgaccaaaactggtagatgctattaaaaagaaactg
tactgcttgggaagtgatccaggttgggtcacagtttatggaatggcaggctgtgggaag
actgttttaacagcagaagctttaagggatcctcagctcttggaagattactttccagga
ggagttcactggatctctgttgggaaacaggacaaagcagggctgctcataaaacttcag
aatctctgtagtagattggaacatgactccactctttcacaaaggccaccacttaacatt
gaggaggcaaaagatcgtcttcgtttgctgatgttacgcaaataccccaggtctcttttg
gtcctggatgacatctgggattcctgggtgttaaaagcatttgataatcaatgtcaggta
ctcatcacgagcagagacagaagtgtaacagatgctgtggctggcaataaatatgaggtt
catgtggaaagtggactagcacatgagaaaggactggagattttatccctgtttgtgaac
atgaaaatatcagaacttccagaacaagctaactctcttgtaagagaatgcaaaggttct
cctctcgtgatatccttgataggtgcattactacgagacttcccaagccgctgggagtac
tatctcaggcagctgcagaataagcagtttaaaagaataagaaaatcatcttcttatgat
tacgaagcccttgatgaagcaatgtccataagtgttgagcagttggatgacaattacaaa
gactactataaagacctctctatcctcccaaaagatgttaaagtacctactaaggttctc
tgtattctttgggatatggaaactgaagaagttgaagatatactacaggaatttgttaac
aaatcactgttgttctgtgatcgtaatgggaagtcattccattattatttacatgatctt
cagcttgactttctcacagagaagaaccgcaaccagctccaggagctacataaaaacata
gtaaatcagtacaagaaatactacaagcttaatacacctgttttgtctcaagaggattgc
atgtactggtataattttctagcatatcacatggcaggtgccaaaatgcagcaggagctc
cgtgaccttatgttttctttagattggattaaagctaaaacagaattggtggggcctgct
catctgattcatgaatatgtagaatatagttcagtcctggatcaaaaggatagcacagtg
cgtgagaatttccaggagtttctgtccttaaatgggcaccttcttggacggcagccgttt
cctgacatcattcagctgggtctttgccagcccgagacatcagaggtgtatcaacaggcc
aagctacacgctcaaagggaaacaggaacattttatttggagtggataaataaaaaatcc
ttgaagaatctctaccgtctggttgtccgtccacatagagatgcagtttaccatgcctgc
ttttctaaggataaacaacgaatagcatcatgtggagctgataaaactcttcaggtgttt
aaagcagaaagtggagagagactcctggagataaatgcccacgatgatgaaatactctgt
tgcactttttctgcagatggtgaatttgtagcaacttgttcaagtgataaaaaagtcaag
gtctggaattcaagaacaggccagtgtaggtgtgtgtatgaagaacactccgagcaggtc
aattgttgccagttcaataacaaaagtggtcagtaccttctggccacctgctcaaatgac
actttcatcaaaatttgggatttgaataaaaaatactgcagaaatacaatgataggtcat
gaaaattctgtcaatcactgcagattttcaccaaatgatgaatatgttgctagctgctca
acagatggaacagtaaagctttgggaatcacgctcaggaaatgaactgaaaagtattgag
ataaaagatttctttaaaaatgcagatgaaaaaccagatgatgtggaggttttagtaaaa
tgttgctcctggtccagaaatggtgacaagattttggtggtagccaaaaataaacttttg
ctttttgacatcaacacctgtggtttgttaactcaagtcattgtcagtcatcacagcaca
atccaatactgtgacttctgtcctggggatgagttagtagcagttgctttgtctcactgc
tctgttgagttatggaatattaagtctttatcaaaagtggcatattgcagaggacacatg
agctgggttcactgtgtgacattttcaccagatggatctttatttctgacttcatctgat
gaccagacaatacgtatctgggaaacaaagaaggtgtgcaagtcttctgatgctgtgctg
aagagtgaactagatgttgtgtttcacaatggtgaagtgatgattttagccatctacaat
cagaagaatttacaacttatcaatggaaatacagacaatgttattatgcagacagtagcc
caagaatcccccatttcctgctgttgcttaagtgaagatcttaaatttgcagcttttgga
caggagagtggaacaataaaggtactacagttgtcagatgggaaggttctgaagtcctgg
gaggcctacaggacatctgtgcagcactgtcgatttacacctgactgtcagactctcatc
tcaagtgctcatgatccagttatacaggtatggaattggcagttgagtgaatgtgtgttt
ctaagagggcacaatgaagcaatcaaggattttagacttctggaaaattcaaaaattctc
tcttggtcatttgatggaactgttaaggtttggaatatcactactggaaacccagaaaga
gattttgcttgtcatagaggtgcagttctttcctgtgctgtttcacctgatggtagtaaa
ttttcatctgcttctgctgacaaaactgcaaagatatggagttttgagagttcatctgtt
cttcatgaactgaaagaccatgaagcctgtgtgcggtgctgtactttctctcctaataac
aaactgttggccactggagatgacaaaggagaaataaggatttgggacgttttaacaggt
acattgcttcatttctgctcccccgttactgtagatgaaggagaaccaacacatgggggt
tgggtaacagacctctccttttctcctgacagtaaaatgcttgtgtcatctgggggctat
cttaagtggtggaatgtaactactggagaatccttacaaaccttctacacaaatggaaca
aatctcaagtcaatacatgtgtcccctaatttcaaagtatatgtgactgttgataatctt
ggcattctctatgtattacagaagttctga

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