Taeniopygia guttata (zebra finch): 100223400
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Entry
100223400 CDS
T01082
Symbol
TRAF2
Name
(RefSeq) TNF receptor-associated factor 2 isoform X1
KO
K03173
TNF receptor-associated factor 2 [EC:
2.3.2.27
]
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu04010
MAPK signaling pathway
tgu04137
Mitophagy - animal
tgu04141
Protein processing in endoplasmic reticulum
tgu04210
Apoptosis
tgu04217
Necroptosis
tgu04621
NOD-like receptor signaling pathway
tgu04622
RIG-I-like receptor signaling pathway
tgu04920
Adipocytokine signaling pathway
tgu05132
Salmonella infection
tgu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
100223400 (TRAF2)
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
100223400 (TRAF2)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
100223400 (TRAF2)
09143 Cell growth and death
04210 Apoptosis
100223400 (TRAF2)
04217 Necroptosis
100223400 (TRAF2)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
100223400 (TRAF2)
04622 RIG-I-like receptor signaling pathway
100223400 (TRAF2)
09152 Endocrine system
04920 Adipocytokine signaling pathway
100223400 (TRAF2)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
100223400 (TRAF2)
09171 Infectious disease: bacterial
05132 Salmonella infection
100223400 (TRAF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tgu03019
]
100223400 (TRAF2)
04121 Ubiquitin system [BR:
tgu04121
]
100223400 (TRAF2)
Enzymes [BR:
tgu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100223400 (TRAF2)
Messenger RNA biogenesis [BR:
tgu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
100223400 (TRAF2)
Ubiquitin system [BR:
tgu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
100223400 (TRAF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
TRAF_BIRC3_bd
zf-TRAF
TRAF2_zf
zf-C3HC4
TRAF3_RING
Sina_ZnF
zf-TRAF_2
zf-C3HC4_2
zf-C3HC4_4
zf-RING_6
zf_C2HC_14
SLX5_C
zf-RING_10
zf-C3HC4_5
Motif
Other DBs
NCBI-GeneID:
100223400
NCBI-ProteinID:
XP_030142174
Ensembl:
ENSTGUG00000002428
LinkDB
All DBs
Position
17:complement(293586..318116)
Genome browser
AA seq
502 aa
AA seq
DB search
MTNHPHAIIIRWRKYFYFQSLETQTEVFIHMAAANSSPPGSLDLNQPGFAKEILGTKLEV
KYLCSDCKNILRRPFQAQCGHRYCSYCLKKIISAGPQKCASCIQEGIYEEGISILETSSA
FPDNAARREVESLPAVCINSGCNWKGTIKEYEAHDEVCPEFPLTCEGCGKKIPREKFRDH
VKTCGRSKVPCRFEAVGCAEVVENEKLPEHERKCLAEHLYMLMSSVLSLKTGAGDLKPLP
VPSSSQNSSPLLAANSLCSESELSRSLELLGRCEALERKTVTFENIVCVLNREVERVSLT
AEAYSRQHRLDQEKIETLSNKVRQLERSIGLKDLAMAEMEEKIRNMEASTYDGVFIWKIT
EFARKRQEAITGRSPAIFSPAFYTSKYGYKMCLRVYLNGDGTGRGTHLSLFFVVMKGPND
ALLRWPFNQKVTLMLLDQNNREHIIDAFRPDVTSSSFQRPVTEMNIASGCPLFCPVSVME
AKNSYVRDDAIFIKAIVDLTGL
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgacaaatcacccccatgcaattataatcagatggagaaaatacttttattttcagtct
ctggagacacagacagaagttttcattcacatggcagcagcaaactcttctccacctggt
tctctggatctaaaccagcctggctttgcaaaggagatcttgggaactaaactggaggtc
aaatacctgtgctccgattgcaagaacatcctcaggcggccgttccaggcacagtgtggc
catcgctactgctcctactgcctgaagaaaatcatcagtgctggacctcaaaagtgtgcc
agctgtatccaggaaggaatatatgaagaaggaatttctattttggaaacaagctcggct
ttcccagacaacgctgcgcggagggaagtggagagtctgcctgctgtctgcatcaacagc
ggctgcaactggaagggaaccatcaaagagtacgaggctcatgatgaagtctgccctgaa
ttcccgctgacttgtgaaggctgtgggaagaagattcccagggagaagtttcgagaccat
gtgaagacgtgcggcagatccaaagtaccttgccggttcgaggctgtgggctgtgctgag
gtggtggaaaatgaaaagctccccgaacatgaaaggaagtgtttggcagagcatctctac
atgcttatgagctctgtgctcagcctcaagactggtgctggggacctgaaaccccttcct
gtcccttcctcatcacaaaacagctccccacttctggcagcaaactcactgtgctcggag
tcagagctctcccggtccctggagctcttgggaaggtgtgaggcccttgagaggaaaaca
gttacctttgagaacattgtctgtgtgcttaaccgggaggtggagagagtgtccctgaca
gctgaagcttacagtcgccaacaccggctggaccaggagaaaatcgaaacgctcagcaac
aaggtccggcagctggagaggagcattgggcttaaagacctggccatggctgagatggag
gagaagatccgcaacatggaggcttccacctacgatggggttttcatctggaagataaca
gagtttgcccggaagcgtcaggaggcgataacaggccgctctcctgccatcttctctcca
gctttctacaccagcaagtacggctacaagatgtgtctgcgcgtgtacctgaacggggat
ggcaccggccgcgggacccacctgtccttgttttttgtggtgatgaagggacctaacgac
gcgctgctgcggtggccctttaaccagaaggtcaccctgatgcttctggaccagaataac
cgagagcacatcatcgacgccttccgccctgacgtgacgtcctcatccttccagcgccct
gtcacagagatgaacatcgccagtggctgccccctcttctgccctgtgtctgtcatggaa
gccaagaactcctacgtgcgtgatgatgccatctttattaaagccatcgttgatctcacg
ggcctctaa
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