Taeniopygia guttata (zebra finch): 100224822
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Entry
100224822 CDS
T01082
Symbol
DHX9
Name
(RefSeq) ATP-dependent RNA helicase A isoform X1
KO
K13184
ATP-dependent RNA/DNA helicase DHX9 [EC:
5.6.2.6
5.6.2.4
]
Organism
tgu
Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tgu03041
]
100224822 (DHX9)
03012 Translation factors [BR:
tgu03012
]
100224822 (DHX9)
Enzymes [BR:
tgu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
100224822 (DHX9)
5.6.2.6 RNA 3'-5' helicase
100224822 (DHX9)
Spliceosome [BR:
tgu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
100224822 (DHX9)
Translation factors [BR:
tgu03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
100224822 (DHX9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHDPS
OB_NTP_bind
dsrm
Helicase_C
DEAD
HA2_N
HA2_C
AAA_19
ResIII
nSTAND3
HMUD2
AAA_14
Dicer_dimer
ATPase
Motif
Other DBs
NCBI-GeneID:
100224822
NCBI-ProteinID:
XP_030135286
LinkDB
All DBs
Position
8:23401737..23455101
Genome browser
AA seq
1433 aa
AA seq
DB search
MAPRKKLKGLVAATITPMTPDGKINLSVIRQYVDYLVNEQNVKNIFVNGTTGEGLSLSIQ
ERKLLAEEWMCQGKDKLDHVIIHVGALNLPECQELARHAAAMGADGIAVIAPFFFKPTNK
DELVAFLQKVASEAPEVPFYYYHIPPLTGVKIRVEELLDGIKAQIPTFQGVKFSDTDLLD
LAQCIHKNETGEFEFLYGVDEQLLGALALGASGAVGSFSLGNFSTLSSNWVRVEGFNYVG
MGNSTNKKDAQSNAARDFINYLVRVNEMKKDEIPAFGPAAGDNPTGGQEAARGVTGSSSA
VGGPLPPHLLLKSEVGNGPDAAPGSCGSHGAQWDRGANLQDYYSRKEEQEVHETPESEVD
LNTDLHGGWTLENAKARLNQFFQKEKIQEEYKYTEMGPDHNRSFNAEMNIYVRQLGRRIF
SREHGSNKKLAAQACALSLVRQLYHLGIIEPYSGQTKKKGESLEPYEVSLSPDLENHLQK
TVRELCLEIVPMPEDPSNPVLINVGKLAHFEPSQRQSHMGVVPWSPPHSNWNPWTGCNID
EGPLANLTPEQISRDLRSDFMYRLEQDQELQRIQEAREALPLKNFESEILDAIHHNSVVV
IRGATGCGKTTQVPQYILDEYIRTNRAAECNIVVTQPRRISAVSVAERVSYERGEEPGQS
CGYSVRFESVLPRPHASIMFCTVGVLLRKVETGIRGISHVIVDEIHERDINTDFLLVVLR
DVVQVYPEIRVVLMSATIDTSMFCEYFFNCPIIEVYGRTFPVQDYFLEDCIQMTQFVPPP
KEKKKKEKDEENGEDDDANCNLICSDEYGPETKHSMAQLNERETSFELIEALLIYIRTLN
VPGAVLVFLPGWNLIYTMQKHLEMSPRFGGHQYRILPLHSQVPLEEQRRVFDPVPPGVTK
VILSTSIAETSITINDVVFVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGRV
RAGFCFHLCSRARFERLQTHMTPEMFRTPLHEIALSIKLLRLGGIGQFLAKAIEPPPLDA
VIEAERTLRELDALDSNDELTPLGRILAKLPIEPRLGKMMIMGCIFYVGDAVCTISAATC
FPEPFINEGKRLGYVHRNFAGTRYSDHVALLSVFQAWDDARMGGEEAEKRFCEHKRLSMA
TLRMTWEAKVQLKDILISSGFPEECLMTQPFNNTGPDNNLDVVISLLAFGVYPNVCYHKE
KRKILTTEGHNALIHKSSVNCPFSSQDIKYPSPFFVFGEKIRTRAISAKTMTLVSPLQLL
LFASKKVLSDGELILVDDWIKLKMPHVAAACITALRAAMEALVVDVSKEPGMVRQLEPAQ
ERMLNVIRQLSRPAAAGMALSAASSRFGDGPRPPKMARYDNGAGLRGWGGYAHGSGHRGR
GYGGYPSWHSAGRGYPGNPGGGYGAGGGCRGGGYRGAGRGYRGGYRDMGRGGW
NT seq
4302 nt
NT seq
+upstream
nt +downstream
nt
atggcaccccgaaagaagttaaagggtcttgtagctgctaccatcactcctatgactccg
gatggaaaaattaacctctcagtgattcgtcagtacgtggattatctggtaaatgagcag
aatgtcaagaacatttttgtgaatggcacaacaggagaaggcttatcccttagcattcag
gagaggaagctgttggcagaagaatggatgtgccagggaaaagacaaattggaccatgtg
atcattcatgtgggagcactgaatcttccagagtgccaagagctggcaagacacgcagca
gccatgggtgctgatggcattgctgtcatagcccccttcttcttcaaacctacaaacaaa
gatgagctggttgctttcttacagaaggttgcatctgaagcccctgaggtgccattttat
tattatcacattcctcctctgacaggtgtgaagattcgtgtggaagagttgctggatggg
ataaaagcacagatccccaccttccagggtgtgaagttcagtgacacagacctcttggac
ctggcacagtgcatacacaagaatgaaacaggggagtttgaatttctttatggggtggat
gagcaactgttgggtgcactggcactaggggcaagtggagcagttggaagtttctcactg
gggaatttctcaactttgtcatcaaactgggtccgagtggaaggcttcaactatgttggc
atgggcaactctaccaacaagaaggatgcgcagagcaacgctgcccgagacttcatcaac
tacttagtgcgggtgaatgaaatgaagaaggatgaaatccctgcttttggaccagcagca
ggtgataaccccactggaggacaggaagcagctagaggtgtcactggttccagttcagct
gtggggggacctcttcctccacatttgcttttaaaaagtgaagtaggcaatggaccagat
gcagcgcccggaagctgtggcagtcatggagctcaatgggatcggggtgcaaacttgcaa
gattattattccagaaaagaggagcaagaagtgcacgagaccccagagtcagaagtggac
ttaaatacagatcttcatgggggttggaccttggaaaatgccaaggcacgtctgaaccag
tttttccaaaaggagaagatccaggaagaatataaatacactgaaatggggcctgatcac
aacaggagctttaatgcagaaatgaacatttatgtgaggcagctgggcagaaggattttc
agtcgtgagcatggatcaaacaaaaagctggcagcacaggcctgtgccctttccctggtc
agacagctctaccatcttggtatcattgagccttactctgggcagacaaagaagaaagga
gaatcgttggaaccctatgaggtgtcgctgtctcctgacttggaaaatcatctgcaaaag
actgtacgggaactgtgtctggagattgtgcctatgcctgaagatcccagtaatccagtt
ctgatcaacgttggcaagctggcccattttgaaccatcacagagacaaagtcacatggga
gttgttccctggtcgccacctcattccaactggaacccttggactggctgcaatattgat
gagggtccattggcaaatctgactccggagcaaatcagcagggatctgagaagtgatttc
atgtaccgtctggagcaggaccaggaattacagaggatccaagaagcaagagaggcttta
cctctgaagaattttgaaagtgaaattctggacgcaatccatcacaattctgttgttgtc
atccgtggtgccactggttgtggcaaaaccactcaggtgccccagtatatattggatgaa
tacatcagaaccaaccgagctgctgagtgcaacatagtggtgacacagccccggcggatc
agcgcagtttccgtagcagagcgtgtgtcctatgagaggggggaagagcctgggcagagc
tgtgggtacagcgtgcggttcgagtctgtgctccctcggccacacgccagcatcatgttc
tgcactgtaggtgttcttctgagaaaggtggagactgggatccgtggcattagtcacgta
attgttgatgagatccacgagagagacattaacactgacttccttttggtggtgctgagg
gatgtggttcaggtgtatcctgaaatcagggttgtcctcatgtctgccaccatcgacacc
agtatgttctgtgaatacttcttcaattgtcccatcatcgaagtctatggcagaaccttt
cctgtccaagattattttctggaagattgtattcaaatgactcagtttgtccctccaccc
aaggaaaagaagaagaaagagaaggatgaagaaaatggtgaagatgacgatgccaactgc
aaccttatttgcagcgatgaatatggcccagaaacaaaacactccatggctcagctgaat
gagagagaaacctcttttgaactcattgaggctctgctgatttatatcaggactctgaat
gtcccaggagctgtccttgttttcttgcctggctggaatttaatctatacaatgcagaag
cacctagaaatgagccctcgctttggaggccaccagtacagaattttacctctgcattcc
caggttcctctggaggagcagcgtcgagtgtttgatcctgtgcctcctggggtgaccaaa
gttattttatctaccagtattgctgagaccagcattaccatcaatgacgtggtttttgtt
atcgactcttgcaagcaaaaagtgaagctgttcactgctcacaacaacatgacaaactat
gccacggtctgggcatcaaaaaccaatctggaacagcggaaaggcagagctgggcgtgtg
cgagccggcttctgtttccatttgtgcagcagagctcgctttgagaggcttcagactcac
atgacgcccgaaatgtttcgaacgccacttcacgaaattgctttgagcatcaagctgctg
cgcctgggagggatcgggcagtttctggccaaagccatcgagccgccccctctggacgcg
gtgatcgaagcagagcgcacgctgagagagcttgatgccctggattccaatgatgagttg
acacctcttggaagaatcctggccaaacttcccattgaacctcgtctgggcaagatgatg
atcatgggctgtattttttatgtgggagatgctgtatgtaccatctctgcagctacctgt
ttccctgaacctttcatcaatgaaggcaaacgcctgggttatgtccacaggaattttgct
gggaccaggtattcagaccacgtagctttgctctctgtcttccaagcctgggatgatgca
agaatgggtggtgaagaagcagagaaaaggttttgtgaacacaaaagactcagcatggct
actcttagaatgacttgggaagcaaaagtccagctaaaagacatacttattagttctggc
tttcctgaagaatgtttgatgactcaaccgtttaacaacactggccctgataacaacctg
gatgttgtaatctccttgctggcttttggggtctaccccaatgtctgctaccacaaggag
aagaggaagattcttaccactgaggggcacaatgctctcatccacaaatcatctgtcaac
tgccctttcagcagccaggacatcaagtatccatcaccttttttcgtttttggagagaag
attagaacacgagccatctctgccaaaaccatgaccttggtgagcccactgcagctgctc
ctctttgcttccaagaaagtcctgtcagatggggagctcattctggtggatgactggatc
aagctgaagatgccgcacgtggcggccgcctgcatcaccgctctgcgcgccgccatggag
gcgctcgtggtggatgtcagcaaagagcccgggatggtccggcagctggagccggcgcag
gagcgcatgctgaacgtcatccggcagctgtcccggccagccgcggcgggcatggcgctc
tcggctgccagctccaggtttggggatggcccccgcccgcccaagatggctcgctatgac
aacggcgctggccttcgaggctggggaggttacgcgcacggctccggccacaggggcaga
ggctacggtggctaccccagctggcactcggcaggaagaggatacccaggtaatcctggg
ggaggctacggagctgggggtggctgccgaggaggaggataccgaggagcaggcaggggc
taccgaggaggctatcgggacatgggcaggggtgggtggtag
DBGET
integrated database retrieval system
