Taeniopygia guttata (zebra finch): 100225140
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Entry
100225140 CDS
T01082
Symbol
SMCR8
Name
(RefSeq) guanine nucleotide exchange protein SMCR8
KO
K23611
guanine nucleotide exchange protein SMCR8
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
100225140 (SMCR8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tgu04131
]
100225140 (SMCR8)
Membrane trafficking [BR:
tgu04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
100225140 (SMCR8)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Folliculin
Motif
Other DBs
NCBI-GeneID:
100225140
NCBI-ProteinID:
XP_030140976
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All DBs
Position
14:6137494..6146549
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AA seq
932 aa
AA seq
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MISAPDVVAFTREEELEDDLYREPPLPEEYSVPLFPFSGQGANPWAKVAGSKFTRDFILI
SEFSEQVGPQPLLTIPDDAKVSGTFDLNYFSLRIMSVDYQASFVGHPPGSAYPKLNFVED
SKVVLGDSKEGAFAYVHHLTLYDLEARGFVRPFCMAYISADEHKIMQQFQELSTEFSKAS
ECLKTGNRKAFANELEKKLKDLDYTRTVLHNETEQQKKANDKGYYTTQAIEKANELASVE
KSIIEHQDLLRQIRSYPYRKLKDSEFNPYEPDCALDRADVGSDQDPTASDPAEPGETHLY
THVPSYTPKLIKAKSAKCFDKKLKTLEELCDVYFFTQTLDQLHHIERTFRGDVCYLLTEQ
ISRALLKQQSVTNFLFEDESFLDEKPPEKQYRGCQGLGQDAIDEKCSEESLAPKVVISLG
SYKSSVECVPIKMEQETEDSEEPKMSESVMSEHQENLDYLDADIKGSISSGESIEVLGTE
KSGSGLTKSESQASLPVIPSPQAGRSKVGSRRTVSEDSIEVLSTCPSESLIPEDFKASYP
SAINEEPYADDDEGGLRFTPRANPGVDDGQDDISKEESLVQVDAACCIGKESPNFLEALP
ELGQKRCEEDGVVRIPPQPYRPAEPGLRGGFPSHQGLPGGILPCELDSRYLTGSREVSKS
SLDECSDSTSHISSAASTCSDRTPSPAHPACAAGERHRKRAGQNALRFIRQYPFAHPAIY
SLLSGRTLVVLGEDEAMVKRLVTALSIFVPNCGAYAKPVKHWVTSALHLVDFQKWKLIGL
QRAVSPAGVNVLHALSRYSRYLSILDADSKTLRCPLYKGTVVARLADHRTQIKRGSTYYM
HVQSILTQLCSKAFLYTFCHHLHLPISEREPEESVVNRRMNFLKHQLGLANEDIKIVQYL
AELLKLHYIQEPGQGGSPLLRFDYVPSFLYKI
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atgatcagcgcccctgacgtggtggccttcaccagggaggaggagctggaggatgatctg
taccgcgagccgcccctgcccgaggagtactcggtgccgctgttccccttctccggccag
ggcgccaacccctgggccaaggtcgccggctccaagttcacccgggacttcatcctcatc
tccgagttctcggagcaagtggggccccagcccctcctgaccatccccgatgacgccaaa
gtgtcgggcaccttcgatctcaattatttttccctgaggatcatgtctgtggattaccag
gcatccttcgtggggcaccctcccggctctgcctacccgaagctgaacttcgtggaggat
tccaaggtggtgctgggggactccaaggaaggcgcctttgcctacgtgcaccacttgacc
ctgtacgacctggaagccaggggctttgtgaggcccttctgcatggcctatatttctgct
gatgagcacaaaatcatgcagcagtttcaggaactctccaccgagttctccaaagcctcc
gaatgcctgaagacggggaaccggaaagcttttgccaacgaactggaaaagaaactaaaa
gatcttgactacaccaggaccgtcctgcacaacgagactgagcaacaaaagaaagccaac
gacaaggggtattacacgacccaggccattgagaaggccaacgagctggccagtgtggaa
aaatcaatcattgagcaccaagacctgctgaggcaaatccggtcgtatccctacaggaag
ctgaaggactctgaattcaacccctacgagccggactgtgccctggaccgggctgacgtg
ggcagcgatcaggacccgactgcctccgaccccgctgagcccggagaaactcacctttac
acccacgtaccatcctacacccccaaactcatcaaagccaagtctgccaagtgctttgac
aagaagctgaagacactggaggaactctgtgatgtttattttttcacccagacccttgac
cagttgcatcatattgagaggacttttcgcggggatgtttgttacctcctgacagagcag
atcagccgggctctcctaaagcaacagagtgtcaccaacttcctctttgaggatgagtct
tttctggatgaaaaacctcctgaaaaacagtacagaggctgccaggggctcggccaagat
gccatagatgaaaagtgttcagaagagtcgcttgctcccaaagtggtcatcagcctgggc
tcctacaagtccagtgtggagtgtgtgcccatcaagatggagcaggaaacggaggactct
gaagagcccaaaatgtctgagtctgtgatgtctgagcaccaggagaacctggactatctg
gatgcggatatcaaaggcagcatcagcagcggggagagcatcgaggtgctggggacggag
aagtcgggatctgggctgacaaaatcggagagccaggccagcctgcccgtcattcccagc
ccccaggcgggccgcagcaaggtgggcagccggcgcacggtcagcgaggacagcatcgag
gtgctcagcacgtgtccctccgagtccctcatcccggaggacttcaaagcgagctaccca
agtgccattaacgaggagccctacgccgatgatgacgagggaggccttcgcttcaccccc
agagcgaacccgggcgtggatgacgggcaggacgacatctcaaaggaagaaagcttagtg
caggtggatgctgcctgttgcatcgggaaggagagtcccaacttcctggaggccctgccg
gagctggggcagaagcggtgcgaggaggacggcgtggtgcggatccccccgcagccgtac
cggccggccgagccggggctgcgcgggggcttcccctcccaccagggcctcccgggggga
atcctgccctgcgagctcgactcgcgctacctgacgggcagcagggaggtgagtaagagc
agcctggacgagtgctcggactccaccagccacatcagcagcgccgcctccacctgctcc
gacaggaccccgtccccagcccacccggcctgcgcggccggggagaggcacaggaagaga
gccgggcagaacgcgctgcgcttcatccgccagtacccctttgcccaccccgccatctac
tccctgctcagcgggaggaccctggtcgtgctgggggaggacgaggccatggtcaagagg
ctggtgacggcgctctccatcttcgtgcccaactgcggcgcgtacgccaagcccgtgaag
cactgggtcacctccgctctgcacttggtggatttccagaagtggaagttgattggactc
cagagggcagtgtcccctgccggggtgaacgtgctgcacgccctgagccggtacagccgc
tacctgagcatcctggacgccgacagcaagaccctgcgctgccccctctacaagggcacc
gtggtggcccggctggccgaccaccgcacgcagatcaagcgtggcagcacctactacatg
cacgtccaaagcatcctcacccagctgtgctctaaagccttcctctacaccttctgccat
catttgcaccttcccatcagcgaaagggaaccggaggaatccgttgtgaatcgcaggatg
aacttcctaaagcatcaactgggccttgcaaatgaagatatcaaaatcgtgcagtacttg
gccgagctgctgaagctgcactacattcaggaaccggggcaaggggggagccccctgctc
agatttgactatgttcccagctttttgtacaaaatctag
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